Hves021998.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Hyles vespertilio
Gene Symbol
-
Assembly
None
Location
HLhylVes1:4645713-4664614[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 8.1e-05 0.0066 17.2 0.1 3 23 184 204 183 204 0.97
2 16 7.4e-07 6e-05 23.6 1.2 1 23 210 232 210 232 0.99
3 16 4.6e-06 0.00038 21.2 2.7 1 23 238 260 238 260 0.99
4 16 3e-06 0.00025 21.7 2.6 1 23 275 297 275 297 0.98
5 16 4.2e-05 0.0034 18.1 3.1 1 23 312 334 312 334 0.98
6 16 2.9e-07 2.4e-05 24.9 1.5 1 23 349 371 349 371 0.99
7 16 0.00013 0.011 16.6 2.8 1 23 377 399 377 399 0.98
8 16 0.03 2.4 9.2 1.8 1 23 406 428 406 428 0.98
9 16 4.9e-07 4e-05 24.2 2.3 1 23 434 456 434 456 0.99
10 16 0.034 2.8 9.0 1.8 1 23 463 485 463 485 0.98
11 16 2e-06 0.00017 22.3 1.5 1 23 491 513 491 513 0.99
12 16 0.00038 0.031 15.1 0.7 1 23 520 542 520 542 0.99
13 16 2e-06 0.00016 22.3 1.8 1 23 548 570 548 570 0.98
14 16 0.0016 0.13 13.1 0.3 1 20 576 595 576 598 0.93
15 16 3e-05 0.0025 18.6 1.3 2 23 605 626 604 626 0.96
16 16 2.4e-06 0.0002 22.0 1.3 1 23 632 655 632 655 0.97

Sequence Information

Coding Sequence
ATGGTGTTTCTTTACTTATGTGGGTGGGGTTGGAAATGGGTGCGATGCATAGAGTTCGCCATTAGTTTCCCGGCACACTGgggcgtgggcgtcgggggcgtggcgcggggcgtgggtgtcCCCGTGCCACCCCCCGGCGACCTACTCGCCACGATATCCATGTTCGAACAACAGATCAAGGCTGAGCCTATGAGCTTCTACACCTCCCATCCACACATACACTCTGGTCCCCCAACAATAGTCCGTTCAGATTCAAATCAAGGGATCATCATGCATCACCAGCAACACCAAGAGGACTCAAAGGACAGCCTTATAGTGcaacaacaagtacaacaacaccaacaagatcttatggaacaacaccagcaacaGGAATTGCAACAGCAGGATGATGAGCTGAGCTTCAAAGGTATGGACGATGACGGCGTTGAAATGGAAATGGATAGTCGGCAGTGTTCCCAGGGTATGGGAGTGGATCTGGGTTCAGTACAAACTAAAATGGAAGTATCAAACGGTGGTCAGTCGGCACCACGATCTAAGCCGCAGGCTTGTAAAGTCTGCGGTAAAGTACTATCGTCCGCTTCGTCCTATTACGTCCACATGAAACTACATTCAGGAAACAAGCCTTTCCAATGCACGGTGTGCGACGCGGCGTTCTGTCGCAAGCCGTACTTGGAAGTGCACATGCGCACGCACACGGGCGAGCGCCCATTCCAATGCGATCTGTGCCTCAAGCGATTCACACAAAAATCCAGTCTCAATACGCACAAACGAGTCCACACAGATGAGCACATGCGCGCGTTGATGGTGAAGGACCGGCCCTACAAGTGTGAGCTCTGTCAGATGCGGTTCACGCAGAGCTCCAGCCTCAACCGACACAAGAAAATACACACGGAGGAGCACAGACGAGCCCTGTTAGAGAAAGTGCGGCCGTACCAGTGCCACATCTGTTTTATGCGCTTCACTCAGAAGTCCAGCCTGGGACGACATGGGAAAATACATACTGAGGAGCACATCCAATCGCTGATCAACAAAGTGCGCCCCTATCAATGTGACATCTGTGACAAGCGGTTCACGCAGAAGTCCAGCCTTGGCACTCATAAACGTATACACACCGGGGAGCGGCCGTTCCAGTGCACCGTCTGCCTCAAGTCCTTCACGCAGAAGTGCGCGCTCAATTTGCACGAAAAAATACATACGGTCCAGGGCAGACCGTTCCAGTGCCTGTCGTGCCCCGCCGCCTTCACCTGCAAGCAATACTTGGAGATTCACACGCGCACGCACACCGGCGAGCGACCCTATCAGTGCGACATCTGTCTCAAGCGCTTCACTCAGAAATCCAGTCTCAACATCCACAAGCGGACGCACTCAGTGCAAGGCCGGCCCTTCCAGTGCCTGCAGTGCCCCGCCGCCTTCACGTGCAAGCAGTACCTCGAGATCCACAACCGCACGCACACCGGCGAGCGGCCGTATCAGTGTGACGTCTGCCTCAAGAGATTCGCGCAAAAGTCAACACTCAACATACACAAAAGAACGCACACAGTGCAAGGGCGTCCGTACCAATGCATGGAGTGTCCGGCGGCGTTCACATGCAAGCCGTACCTGGAGATACACATGCGCACGCACACCGGCGAACGTCCGTTCGAGTGCGATGTCTGTTACAAACGCTTCTCGCAGAAATCCACGCTCAACATTCACAAACGCATTCATACCGGTGAACGTCCATACGCATGTGATATTTGTCAGAAACGTTTTGCTGTGAAGAGCTATGTAACAGCTCACAGATGGTCGCACGTGGCGGACAAGCCGCTGAACTGCGAGCGCTGCTCGATGACGTTCACGTCCAAGTCGCAGTTCGCGCTGCACATCCGCACGCACTCCGCCGGCTCCTGCTACGAGTGCAGCGTGTGCGGACGCAGCTTCGTCAGGGACAGCTACTTAATAAGACATCACAACCGCGTCCACCGTGAGAACCACAGCAACGTGTCTGCGAACAGCATCGGCACTCTGAACAGCGTGGCCACCAACACTAACAATTCCAACAGCAACTATGACTCGCCCGGCGTTTGTGACTTAAGCTTTGTGCCAATGGTGAATCGCTACATGACATCGCAGGGCACTCAGGTGTCCATGCAGGACACGCAGAGTAAGATGTCGGCGATGTCACCGCAATCCATCGCCTCTATATCATCGCCACCACCCTCCCACACCCCTACGCCCCAACCACAGATGTCTGGTCAGATGCATCTTGCAGACTGA
Protein Sequence
MVFLYLCGWGWKWVRCIEFAISFPAHWGVGVGGVARGVGVPVPPPGDLLATISMFEQQIKAEPMSFYTSHPHIHSGPPTIVRSDSNQGIIMHHQQHQEDSKDSLIVQQQVQQHQQDLMEQHQQQELQQQDDELSFKGMDDDGVEMEMDSRQCSQGMGVDLGSVQTKMEVSNGGQSAPRSKPQACKVCGKVLSSASSYYVHMKLHSGNKPFQCTVCDAAFCRKPYLEVHMRTHTGERPFQCDLCLKRFTQKSSLNTHKRVHTDEHMRALMVKDRPYKCELCQMRFTQSSSLNRHKKIHTEEHRRALLEKVRPYQCHICFMRFTQKSSLGRHGKIHTEEHIQSLINKVRPYQCDICDKRFTQKSSLGTHKRIHTGERPFQCTVCLKSFTQKCALNLHEKIHTVQGRPFQCLSCPAAFTCKQYLEIHTRTHTGERPYQCDICLKRFTQKSSLNIHKRTHSVQGRPFQCLQCPAAFTCKQYLEIHNRTHTGERPYQCDVCLKRFAQKSTLNIHKRTHTVQGRPYQCMECPAAFTCKPYLEIHMRTHTGERPFECDVCYKRFSQKSTLNIHKRIHTGERPYACDICQKRFAVKSYVTAHRWSHVADKPLNCERCSMTFTSKSQFALHIRTHSAGSCYECSVCGRSFVRDSYLIRHHNRVHRENHSNVSANSIGTLNSVATNTNNSNSNYDSPGVCDLSFVPMVNRYMTSQGTQVSMQDTQSKMSAMSPQSIASISSPPPSHTPTPQPQMSGQMHLAD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00635601;
90% Identity
iTF_01312388;
80% Identity
-