Hdia017872.1
Basic Information
- Insect
- Hydrotaea diabolus
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_963513945.1
- Location
- OY740718.1:165387415-165414280[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.78 2.6e+04 -5.0 4.2 57 90 40 74 23 90 0.37 2 5 0.24 7.9e+03 -3.3 1.8 52 80 152 168 117 210 0.43 3 5 0.41 1.4e+04 -4.1 4.0 35 74 200 239 182 282 0.53 4 5 8.4e-117 2.8e-112 375.8 26.6 1 299 297 596 297 597 0.92 5 5 0.059 2e+03 -1.3 3.8 212 245 618 650 599 670 0.53
Sequence Information
- Coding Sequence
- ATGCCAGTGAAACAAAATAATGCTACAGAGAATCTTGTTCTTAGCGGTGGCGGCGGCGGGCATGGCACAAATTCGAGTTCGACAAAAACAAATAGTAAAAACAgtcataaaaataagaaaacgattaaaaaatcattgaagtCCAAAACTCTGAAAActaaaagcaacaacagcaacgaagCCGACATTAACGACatcggcagcaacaacaatatcagTAATAACAGCAAACACGACGAGCAAAAAATTGTAAGCGATGAAATCATCGAGGAGTTCGATTTCAGTGATAGCGATTTGGCCGAACTCAATGTTGCTGGGAGTGCGAATGGAGACAACAACAATGCGGCAATAGAAGAAGGCGAAGAAGCCAAAGAGTTAATTGTGGAGTGCAGTGCGGCGAGTGTGCATAGCGCCGATtccaccaacaccaccaccgcAACCACTGATAACGAACAGGTGGGAGAGACATCAATGACAGCCACCGATAACAATGATAAACACGAACCGTGTTCTACCGTAACTACACAAGCAAACAATGATGATGAAGAAAAAGAGGATTCATTGACTATGAATGCCAACGAAACCGATGAAGTATGtgaagaaaatatgaaaaacaactCCGAAGAATGTGCGTCTTCAAGTCAAGATATCGTTGCTGTCGCTGCCTCCGCAAACaacacacaacaacagcagcaacaacaaatccCATCTGAAATGGCAACGATGATGGATGTAAAGtccaaacaaacaaatgattCGAGTTCAGCGGTCTCTTCACCGCCGACAAACGATGAAAGTAACTGCGGTGGTGATGACAATGCCTCCGAGTACACTGAAGAACCATATGATGAACTGTTAGTTCAATTTCTAGACGAAGGAAATAATATTgCTGAAGCAAGATTAGCTGCCCGGAGGCAGGCCAGAGCGGAAGCCCGAGAAATTCGCATGCGAGAGTTGGAACGTCAACAGAAGGAACAGGAGCTTAATGCTGATCGTGTATTCGATATGCATACAACGGCATCGGGCATTGATCCTCTGTCGCGAACACGACTGGGCATGGGCAGTACATCACCGGCAATTAGTGGCTTATTAAATTCTACACGTGGCGGCAACTCAATGTCTTCAAGACGTAGCAGCGAAGATTCTCTAGAAGAGGAAGGACGCAGTTTGAGAGATATACGCCATGAATTGAAGGATGTGGAAGAGCGATTTCGTAAGGCCATGATAGCTAATGCTCAGTTGGACAATGAGCGTGCCTCACAGACTTATCAAATACAGTTGCTAAAAGACAAACTCGAAGATATGGAAGAATCATATGCCCAGTTGCAGCGCGAGTTTAAAGAAAAGTCACGCGATTGCAATGCTCTAAAGCGTTCCTTGGACAAACTGAGCGAAGAATTGAAACTTGTACAAGGCCAACTAAATGAGCGAGACACACTTATTGCCGAACAAGGTTTAGTTATTGTGGCCGTCGAAAACGAGGATGGCACTGATGCCAAGCGTGCTCTAGTCAGCGTAGAAAATGCACAATTATTAGGATCGGTTCAGGGTTCTTTGGATGTCCGACTTAAGAAATTCACCGAAGAGAAACAACAATTACACGCCGAAGTCCAACAGTTGCAAGAGCAATTAGAGACATACAAAAGTCAAGGCAAAGGCCGGGGACGGGGTAACTCTCTGAATGGGCCTCTGGGTTCAGACGATGATGACTATGAAGCTCAGAGAgaagcaaataaaattatatcggactataagtataaattgcaaaaagctgaacaagaaattgctagTCTACAATCAAGTTTAGCTCGTTCCGAAACTCAAGTTATACGTTACAAAAGTACAGCCGAGGCAGCTGAAAAGGCGGAATCCGAGCTTAAAATTGAAAGGAGGAAACTGCAACGAGAGAATCGAGAGGCCATGGAAAAACTGGAGGAGCTGGAAACGTCGAACAATCATTTAATCAAACGTCTGGATAAGTTAAAGAATGCCAAGAGTGCACTTCTAAAGGATCTTTGA
- Protein Sequence
- MPVKQNNATENLVLSGGGGGHGTNSSSTKTNSKNSHKNKKTIKKSLKSKTLKTKSNNSNEADINDIGSNNNISNNSKHDEQKIVSDEIIEEFDFSDSDLAELNVAGSANGDNNNAAIEEGEEAKELIVECSAASVHSADSTNTTTATTDNEQVGETSMTATDNNDKHEPCSTVTTQANNDDEEKEDSLTMNANETDEVCEENMKNNSEECASSSQDIVAVAASANNTQQQQQQQIPSEMATMMDVKSKQTNDSSSAVSSPPTNDESNCGGDDNASEYTEEPYDELLVQFLDEGNNIAEARLAARRQARAEAREIRMRELERQQKEQELNADRVFDMHTTASGIDPLSRTRLGMGSTSPAISGLLNSTRGGNSMSSRRSSEDSLEEEGRSLRDIRHELKDVEERFRKAMIANAQLDNERASQTYQIQLLKDKLEDMEESYAQLQREFKEKSRDCNALKRSLDKLSEELKLVQGQLNERDTLIAEQGLVIVAVENEDGTDAKRALVSVENAQLLGSVQGSLDVRLKKFTEEKQQLHAEVQQLQEQLETYKSQGKGRGRGNSLNGPLGSDDDDYEAQREANKIISDYKYKLQKAEQEIASLQSSLARSETQVIRYKSTAEAAEKAESELKIERRKLQRENREAMEKLEELETSNNHLIKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00816548;
- 90% Identity
- -
- 80% Identity
- -