Hcyr007184.1
Basic Information
- Insect
- Hydrotaea cyrtoneurina
- Gene Symbol
- Lrrfip2_1
- Assembly
- GCA_958296145.1
- Location
- OY282513.1:5563340-5568664[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.22 5.8e+03 -3.2 2.4 237 262 34 60 18 81 0.41 2 4 0.034 8.8e+02 -0.5 1.4 110 175 146 211 120 252 0.70 3 4 2.8e-115 7.3e-111 370.8 26.0 1 299 269 568 269 569 0.92 4 4 0.06 1.6e+03 -1.3 3.5 220 244 597 621 572 642 0.47
Sequence Information
- Coding Sequence
- ATGCCAGTGAAACAAATTAATGCTACGGAGAATCTTGTTCTTGGTGGCGGGCAGAGCTCAAATTCTAGTTCATCAAAAACAAATAGTAAAAACATTCATAAGAATAAGAAACctattaaaaaatcattgaagaccaaaaatactaaaagtaagagcaacaacaacaattccgaCAACAGTATCAGCACTAGCATCAGCAACGAACAAATTGTAAGCGATGAAATCATCGAGGAGTTCGATTTTAGTGATAGTGATTTGGCTGAACTCAATGTCGCTGGGAGTGCGAGTGGTGGAGACAACAACAATGTGGTAATAGAAGAAGGCGAAGAAGCCAAAGAGACAATGGTGAAGTGCACTATGAGTGTGCATACCGCCGACACCACCGAGACCCCTGATAACGAACAGGTGGGAGAGACATCAACGACAGCCACTGATAACAACGATAAACACGAACAGTGTTATCCAGCACAAGAAGAAATGTCATTGACTATGACTACCAATGAAACTGATGAAGTATGTAgaggaaatatgaaaaacaattcgATAGAATGTGAGTCTTCCTGTCAAAATATCGCAGTCGCCACTGCCTCCGCAAACAATACacagaagcagcagcaacagccatCTGAAATGGCAACAATTACGAATGTAAagtccaaacaaacaaatgaatcgAGTTCAGCGGTCTCTCCACCAATAAGAAATGATGAACGTAATTGCGGAGATCATGACAATGGTACCGAGTACCTGGATGAACCATACGGTGAACTGTTAGTTCAATTTCTGGATGAAGGATATAATATTGCTGAGGCAAGATTAGCTGCCCGGAGGCAGGCTAGAGCAGAAGCACGAGAGATCCGAATGCGGGAGTTGGAACGTCAACAGAAGGAACAAGAGCTGAATGCCGATCGTGTATTCGATATGCATACAACTGCGTCGGGCATAGATCCTCTGTCGAGAACACGACTGGGCATGGGCAGTGCATCACCGGCAATTAGTGGCTTATTAAATTCATCACGTGGCGGTAACTCAATGTCTTCAAGACGTAGCAGCGAAGATTCTCTGGAAGAGGAAGGACGCAGCTTGAGAGATATACGCCATGAATTAAAGAATGTAGAAGAACGATTCCGTAAGGCCATGATAGCTAATGCTCAGTTAGATAATGAGCGTGCCTCACAGACTTATCAAATACAGTTGCTAAAAGACAAACTCGAAGATATAGAAGAATCGTATGCCCAGTTGCAGCGTGAGTTTAAAGAGAAGTCTCGCGACTGTAATGCTCTGAAACGTTCATTGGACAAACTAAGCGAAGAACTTAAACTTGTACAAGGCCAATTAAATGAGCGAGACACACTTATTACCGACCAAGGTTTAGTTATTGTGGCCGTGGAAAACGAGGATGGCACAGATGCTAAACGTGCTCTAGTCAGCGTAGAAAATGCACAATTATTAGGATCAGTCCAGGGTTCTTTAGATGTCCGACTTAAGAAATTCACCGAAGAGAAACAGCAGTTGCAAGCGGAAGTCCAACAGTTTCAAGAACAATTAGAGACCTACAAAAGTCAAGGCAAAGGAAGAGGACGGGGCAATTCTTTAAATGGTCCTCTGGGTTCAGACGATGATGACTATGAAGCTCAGAGAgaagcaaataaaattatttcggACTATAAGTATAAATTGCAAAAAGCTGAACAAGAAATTGCTAGTCTACAATCAAGTTTAGCTCGTTCCGAAACTCAAGTTATTCGTTACAAAAGTACAGCCGAGGCAGCTGAAAAAGCAGAAGCTGAGCTTAAAATTGAAAGAAGGAAACTGCAACGAGAGAATCGAGAGGCCATGGAAAAACTTGAAGAGCTAGAAACGTCGAACAATCATTTAATCAAACGGCTGGATAAGTTAAAGAATGCCAAGAGTGCACTTCTTAAGGATCTTTGA
- Protein Sequence
- MPVKQINATENLVLGGGQSSNSSSSKTNSKNIHKNKKPIKKSLKTKNTKSKSNNNNSDNSISTSISNEQIVSDEIIEEFDFSDSDLAELNVAGSASGGDNNNVVIEEGEEAKETMVKCTMSVHTADTTETPDNEQVGETSTTATDNNDKHEQCYPAQEEMSLTMTTNETDEVCRGNMKNNSIECESSCQNIAVATASANNTQKQQQQPSEMATITNVKSKQTNESSSAVSPPIRNDERNCGDHDNGTEYLDEPYGELLVQFLDEGYNIAEARLAARRQARAEAREIRMRELERQQKEQELNADRVFDMHTTASGIDPLSRTRLGMGSASPAISGLLNSSRGGNSMSSRRSSEDSLEEEGRSLRDIRHELKNVEERFRKAMIANAQLDNERASQTYQIQLLKDKLEDIEESYAQLQREFKEKSRDCNALKRSLDKLSEELKLVQGQLNERDTLITDQGLVIVAVENEDGTDAKRALVSVENAQLLGSVQGSLDVRLKKFTEEKQQLQAEVQQFQEQLETYKSQGKGRGRGNSLNGPLGSDDDDYEAQREANKIISDYKYKLQKAEQEIASLQSSLARSETQVIRYKSTAEAAEKAEAELKIERRKLQRENREAMEKLEELETSNNHLIKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00817422;
- 90% Identity
- -
- 80% Identity
- -