Hcyr015404.1
Basic Information
- Insect
- Hydrotaea cyrtoneurina
- Gene Symbol
- -
- Assembly
- GCA_958296145.1
- Location
- OY282515.1:22468635-22470536[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.7e-08 3.2e-05 24.1 0.0 11 39 412 440 407 444 0.83 2 4 2.8e-13 5.1e-10 39.4 0.0 5 44 460 499 457 500 0.90 3 4 0.018 34 4.8 0.0 27 37 529 539 525 544 0.89 4 4 4.7e-17 8.7e-14 51.5 0.1 4 41 568 605 567 607 0.93
Sequence Information
- Coding Sequence
- ATGAACAATCTAAAGTGGATGGGCCACTCGGCCACCATCATAGATATACACAAAAATTTGCGAGATGACATACATGGTTGTGAAGTTACTCTGGTGGCGAAGGAACATTCAGTGAAGGCACACCGCTTCGTATTGTCGTCATGCAGTGATTTGTTTAAAACCCTTTTAAGTGACGTACCGCTCGGCCAAGAGTGTTGTATAATGGTGCCCGATATCAAAGGCATGTTGTTGAACAATGTTCTAGCTTTTATATATTTGGGTGAATGTTCGTTGTCCTCGACAAATTTGTCGGAATTTCTGGAAGCCATAACTGTACTGGGTATAAAGAGTGCAATTAGTTTTGAGTGTAATACGAATGCATTACAGGCTGCTCAGAATCAGAACAATGCTATGGTATCGACGCCGTCATCGTCCAGCGCAAATAATAGTGGTGTTCTTAGTGTAGGTGAGCATGTAAGTGCTAGTGCTGCCGGTCCAGGACCAGGCGATGCTCTGGACAACCAGCAACaggaagaaatcattgaaaccCAAACAGTTCTACACGCTGACACCCAGACGACAACTACTAGCAGCAATGTGACATCTGCGGCTACAAGCAACAGAGAACTGGAATTTCTAGATGTGTACCATGAGCCGCAACATAAAATCACATATTCTATAGAACACGTACCGGGCTCTACGGGTGGCAACGAATTCATTTTAACGGAAAATTCTGGCACGTTCACATTGACACATAATCACAAATTGGACTCAAGTTCTAGTGCTGAATCTACTAATATGGAAGTAACTGAAGATGATGCATGCGAATCTCATATCATTGAAGAATATAGCAGCGGAGAAGAGCCGCTGATACATATCGGCGCAGGAGAAACTGGAGTGGTAGCAGCAACAAATGTGGTTGCAACACAAACGGCAAATCCTTCTGCCGCTACAACCACGACGTCGATTATacaaatgaaaccaaaaattaaaaccattAAACTCAAAGGGCATACAACGGCGACTGCGATCATACCTAAAATGGAACCAGTGGCAGTGGTCAATGATATGGATAGCAACGTGCAGCACACAGGTGATCCTATATCTATAATGCATACCAGCACAGATGAAAGATATACTTTGTTAAAGGATAACAGTGCAAATGAATCTGTTGGTTCCGGCAATACCACCAATGAATCCGGAGATTTCTCTATGAACACCTCGGGTCTTACATCTGCCGACTTGGCGTATCAGGCTATGGTCAGTGAAGGCATGTCTTTGCCAAAAGCAGCTGTTAAGTTCAACGTATCCAAAACGGAACTGTGGAGGCGTGTTCGTAGTACCGGTGTTGAAAATCTACATAAAGCTCAAAAGTTAGATCCCGAAAAGTTGGATGTCATTGAGTTGGCCAGTCAAGCTGTTATATGTGAAGGACTATCACTTCAAAAAGCGGCCGTGCGATACGACATTTCGAAAACAGTTCTATGGAGAAGGGTTCGCAAACATCCACAGTATATGAAGACGACACGAGAGAATCCGATAATTTCAAAGGCCTACGAACGTCTGAAATCTGGAGAATCTCTCAAAAGTATATCGCAAGATCTAGATATACCCATGTCTACGTTACATCGCCACAAGGTGCGTTTGTCCCAATCGGGTCTATTGCCAGATTTTGTAAGTTGCAGAAAACGTGACAGCGTGTCAAAGGACGATTTGAAAATGAAACTTGCCAAAGCGGTACATGCGTGCGTTCACGAAGGCATGTCACAAAATCACGCCGCCAACCtctatgaaatttcaaaaagtacttTATGGCGGCATTTGCAGCGACGTGTCGCTGAAGCGGAAGCAGCCGAAGGTGCGGTTGAAGAATCAATGGAAGAAGGCGAGGAGGAAATCAAACAGGAGATCATTCTATCCTAA
- Protein Sequence
- MNNLKWMGHSATIIDIHKNLRDDIHGCEVTLVAKEHSVKAHRFVLSSCSDLFKTLLSDVPLGQECCIMVPDIKGMLLNNVLAFIYLGECSLSSTNLSEFLEAITVLGIKSAISFECNTNALQAAQNQNNAMVSTPSSSSANNSGVLSVGEHVSASAAGPGPGDALDNQQQEEIIETQTVLHADTQTTTTSSNVTSAATSNRELEFLDVYHEPQHKITYSIEHVPGSTGGNEFILTENSGTFTLTHNHKLDSSSSAESTNMEVTEDDACESHIIEEYSSGEEPLIHIGAGETGVVAATNVVATQTANPSAATTTTSIIQMKPKIKTIKLKGHTTATAIIPKMEPVAVVNDMDSNVQHTGDPISIMHTSTDERYTLLKDNSANESVGSGNTTNESGDFSMNTSGLTSADLAYQAMVSEGMSLPKAAVKFNVSKTELWRRVRSTGVENLHKAQKLDPEKLDVIELASQAVICEGLSLQKAAVRYDISKTVLWRRVRKHPQYMKTTRENPIISKAYERLKSGESLKSISQDLDIPMSTLHRHKVRLSQSGLLPDFVSCRKRDSVSKDDLKMKLAKAVHACVHEGMSQNHAANLYEISKSTLWRHLQRRVAEAEAAEGAVEESMEEGEEEIKQEIILS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00816675; iTF_01231501; iTF_01231721; iTF_00817565; iTF_00817332;
- 90% Identity
- iTF_00816675;
- 80% Identity
- iTF_00816675;