Hdia022039.1
Basic Information
- Insect
- Hydrotaea diabolus
- Gene Symbol
- bab2
- Assembly
- GCA_963513945.1
- Location
- OY740719.1:130603290-130605206[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.9e-08 3.7e-05 24.2 0.0 11 39 417 445 409 449 0.83 2 4 3.4e-13 6.6e-10 39.4 0.0 5 44 465 504 462 505 0.90 3 4 0.022 44 4.8 0.0 27 37 534 544 530 549 0.89 4 4 6.1e-17 1.2e-13 51.4 0.1 4 41 573 610 573 612 0.93
Sequence Information
- Coding Sequence
- ATGAACCATCTAAAGTGGATGGGCCATTCGGCAACCATCTTAGACATACACAAAAACTTGCGAGATGACTTTCATGGTTGTGAAGTCACTCTGGTGGCGAAGGGACATTCCGTAAAGGCCCACCGATTCGTTTTGTCGTCATGCAGTGACTTGTTAAAAGGCCTCCTAAGTGACATACCACTGGGCCAGGAGTGTTGTGTAATGGTGCCCGACATCAAGGGACCCTTGTTGGATAATGTtcttgcatttatttatttgggcGAATGTTCGCTGTCCTCAACTAATTTGTCGGAATTCCTCGAAGCCATAAATGTATTGGGCATCAAGAGCGCAATAAGTTTTGAGTGCAACACGAATGCCCTACAGGCCGCTCAGAATCAAAACAATAACGCGATGGCGTGTGCATCATCCTCCAGTGCAAGTAGTGCAGCGGTTGGTGGTGTCGGAGGAATGGCAGTACGACATGTCAGTGCTAGTGCTGCCGGTCCAGGGCCGGGCGGTGCTCTTCACCACCAGGATCAGGAAGAATTAATTGAAACGCAAACCGTTTTGCACGCGGATACGCAGACGCTACCGACTGCCCCCAGTAGCAATGTGACTTCTGCAGCTTCTAGCAACCGCGACTTGGAATTTCTGGACGTTTACCATGAACCCCAACATAAGATCACTTATTCGATAGAACATGTGCCTGGCTCCACTGGTGGCAATGAGTTTATTTTAACGGAAAATTCTGGAACATTCACTTTGACGCACAACCACAAGTTGGAATCGACTTCTAGTGCAGAATCCACCAATATGGAAGTAACCGAAGATGAAGTATGTGAATCTCATATCATAGAAGAATATAGCAGCGGAGATGAACCGCTAATTCATATCGGAGGAGCGGAAACGTCAGCAGTGCCAGCAACAAATGTTGTGGCAACGCAAACTACAAATCCGTCTGCCGCTACCACCACGAACACATCGATAATAcaaatgaaaccaaaaattaaaacaattaaactcAAAGGACATGTAACGGCGACAGCGATAATACCTAAACTGGAGCCGGTGGGCAATGATATGAACAGTAGCGTGCATCAGACGGAAGACCCCGTAACGATGCTGCATTCCAGCTCAGACGAGAGTTACACCTTGCTTAAGGATAACAGCGCAAATGAATCTGTTGGTTCCGGCAATACAACCAATGAGTCGGGAGATTTCTCTATGAATTCCACCGGCCTTACAGCTGCCGACTTAGCGTATCAGGCCATGGTCAGTGAGGGCATGTCTCTGCCAAAGGCAGcggttaaatttaatgtttccaAAACAGAGTTGTGGAGGCGTGTTCGTAGCACCGGCGTTGAAAATTTACACAAAACTCCTAAGCTAGATCCCGAAAAGTTAGACGTCATTGAGTTGGCCAGCCAAGCTGTTATATGTGAAGGTCTTTCGCTCCAAAAGGCCGCTGTGCGTTACGATATATCAAAAACAGTTCTTTGGAGAAGAGTTCGCAAACATCCGCAGTATATGAAGACGGCACGCGAGAATCCCATCATTTCAAAAGCTTACGAACGTCTGAAATCTGGTGAATCTCTTAAAAGTATTTCGCAAGATCTGGACATTCCCATGTCCACTCTACATCGCCACAAAGTTCGTTTGTCCCAATCTGGGCTGCTACCGGACTTTGTCAGTTGCCGGAAACGCGACAGCGTGTCAAAGGATGATCTGAAACTGAAACTTGCCAAAGCTGTACATGCATGCGTGCACGAAGGTATGTCACAAAATCATGCCGCCAATCTCTATGAAATATCGAAAAGTACGCTATGGCGTCATTTACAAAGGCGTGTCGCTGAGGCAGAGGCAGTGGAAGTCGCCGTTGATGAATCGATGGAAGAAGGAGAGGAGGAAATCAAACAGGAGGTTATTCTCTCCTAG
- Protein Sequence
- MNHLKWMGHSATILDIHKNLRDDFHGCEVTLVAKGHSVKAHRFVLSSCSDLLKGLLSDIPLGQECCVMVPDIKGPLLDNVLAFIYLGECSLSSTNLSEFLEAINVLGIKSAISFECNTNALQAAQNQNNNAMACASSSSASSAAVGGVGGMAVRHVSASAAGPGPGGALHHQDQEELIETQTVLHADTQTLPTAPSSNVTSAASSNRDLEFLDVYHEPQHKITYSIEHVPGSTGGNEFILTENSGTFTLTHNHKLESTSSAESTNMEVTEDEVCESHIIEEYSSGDEPLIHIGGAETSAVPATNVVATQTTNPSAATTTNTSIIQMKPKIKTIKLKGHVTATAIIPKLEPVGNDMNSSVHQTEDPVTMLHSSSDESYTLLKDNSANESVGSGNTTNESGDFSMNSTGLTAADLAYQAMVSEGMSLPKAAVKFNVSKTELWRRVRSTGVENLHKTPKLDPEKLDVIELASQAVICEGLSLQKAAVRYDISKTVLWRRVRKHPQYMKTARENPIISKAYERLKSGESLKSISQDLDIPMSTLHRHKVRLSQSGLLPDFVSCRKRDSVSKDDLKLKLAKAVHACVHEGMSQNHAANLYEISKSTLWRHLQRRVAEAEAVEVAVDESMEEGEEEIKQEVILS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00816465;
- 90% Identity
- iTF_00817565;
- 80% Identity
- iTF_00817565;