Hten013793.1
Basic Information
- Insect
- Hydropsyche tenuis
- Gene Symbol
- Rel
- Assembly
- GCA_009617725.1
- Location
- VTON01000122.1:564131-568408[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 7.3e-36 4.3e-32 111.4 0.2 1 168 80 250 80 251 0.85 2 3 0.95 5.6e+03 -2.9 0.1 105 142 522 559 515 578 0.82 3 3 1.1 6.8e+03 -3.1 0.0 82 101 893 912 888 918 0.77
Sequence Information
- Coding Sequence
- ATGGAATCGTTTGGCAGTGTGTTTGCTTGCAATGGAAATACATATGAACAACTTAGTTACATAGACTTGAGCGATTGCAGTTCTTCATTGTCTCCGCAGTCGTTACTATCGCCCGGTTCTAGTACTCTGGTAATGTCCCCACCAGCTCAGCAAGTACCGCAagaggaaaatttatatgatagaaTGATAGATAGCAATATGTTTTATGACAAAACAGAAGtttttaaaaaaccaattttgaaaatcatcgaCCAACCTACGAAAGAGTTTAGGTTTCGATACAAAAGCGAAACCGGCACACATGGGTGTATATCGGGAAGGTCACGTAAAAAGTCGTTTCCGGCAGTACAGCtcttgaattattcaaaagatgCCATGATAATGTGCTCACTAGTACAAAATAATGCGAAACATGATCGTCACCCACACAGTTTGGTCGTTTGGAAAGGAGACAAAGAAGTTACCGATCCCCATGAAGTTCTAATAGGTcctcataataaatttattgcaagGTTTCCCAATATGGCCATATTATTTACGGGAAAAAAGTCAATTCCAGAagaacttttaaaatataaaaagcaattaaaaaacaattcgatGTCACCCGAGGAAGAAAAACATTTAAAAATCATGTGCGAGAACGAAGCTAAAAgtatcaatttgaattcagTATGCTTGAAATTTTCTGCCTTCGATAACAATCATATGCTTATTTGTGATCCCATATTTTCTGAAGCTATCGATAATTCaaaaagtgCTGAAACatgtcaattaaaaattgtaaatattagtAAAACTTCAGGATATTGTAACGGCGGTGAAAAGATTTTCttgtttgttgaaaaagtCAATAAAAaaaatattaaagtgagattttttgaaatcgtcGACGATGTAAAAGTATGGGAAGACTTCGCATATTTCACAGAACTTGATGTTCATCATCAATATGGGATTGTTTTTCaAACACCAGCGTATCATGATCTCACCATAACACACGATGTGAATGTTTTTGTAGAACTTTTCCGACCTAAAGACAGCGCAACCTCTACAGAAATACAATTCCGTTACAAACCCATGCCGCGCCAAAATAAGAAAAGACGCATCGAAGACGACTCTGAAGCGATATCAGCAGAAgaactattttcatatttgccCAACCGTGAAATTCCCCAGGCAGATGTGCCCATATTTGTTCACAACTTCAATGAAATACaaatAACACCAAATGGAGGATTTAATCATAAAGAGATAGAAAATCAAAGAATTCCAGAAGATATATCTCAACAAAAAAGTTACATATCTCATCACAATTTTATACCCAGTGTCGAAGATTTTTCGATTGAACAAAATAGACCGAATTCAGGCGCTATGGAAATCGAAAGACTTTTACATGAATACACACAAgAACTTTTCCCGCTCGAAAATACAGAAATGAACTCGTGCGTGTTCTTCGATCCTATTTTATCATCAAGTAATATTGTGAGTGATGCTCCTCAAAATAATAGCAAACGGTCATCTAAAGATaacgaaaacaatataaatttgaaggAATTAGCTGAAATGctTGAAAATATGCACGAAAAGTTGCAAATGTGTGAATCTTCCAAAAAACTTAACGAAAAATGCCAAACTATGTATCGAGGAAACGATTTAACAAAATTAGGATTGgtGAACGTTATGGCACAATTGTATAAGGAAGTTCCGATTGTTCAATGTTATTTGGAGAAGATTCTCGAAGACGGATTATCTGATGGAGAAACTTTTCTTCATTTGCTTGTGACTATTGATgagaaatcatttttaaagtCAATCTTagattttatgaatgaatgCAAACTATTCACGTGTATTCATGGTGTGAACAAACAGCAAGAAACAGCTTTACATAGGGCAGTTAATTTTCAACGATtggatttgattgatttattgctTACATCTGGTTGCAATCCGAACTTATGTGATGAGAATGGGAACACTCCAATGCATCTGTCTATTATAAACGCTAATTATGATTGTTTAGAACATCTATTGGCACATAAAAATTCTGCATCTTCgttagatttaaatatttgtaacaaTGacGGTTATAGTCCAATACATATAGCTTTTATGTCTGCTTCAATCGAAGTCATCGATTTACTGATGAATTCAGGTGCTAATACAGAGTTGGAAGTTTCAACAGATGGGCGAACGATATTGCATCTTGCAGTCGAAAGAGGAGATTTAAAAATGGTTTCGTTTATAGTAGAAAAGGCGCTGGTGCCGATAAATGCAATGACGTATAAAGATTTTACCCCTATGCATTCAGTGTGCGTTTCCAAGAATGAAAATGCAATTGATATTTGCAAGTATCTTTTGGAAAATGGGGCGAAtcctttaataaaatatgacaaaaaCTTTATATCATCTTTAGCCGCAAACAACAATAATTCTCagattGCAGAACTTATCgaagaatatattgaaaagagcaataatataaaatcggaGACCGATGATTTCTTAGACGAAAATACTATAACAACTATTTCAAATCTGTTGGATAAATCTGGTAAATGGAGACAAGTAGCTGAAAATTTAGGTTTTCAATCCATAATTTCAGTGTGTGAGCAATCGGAAAGTCAATCCAGCAGTCCTAGTGCcattcttttaaataatattgaaATGGAGCAAAATATATCCGCACAAGATTTATACAAACTATTTAAGAATCTTGGAATTAACGATGCTGCTgaagaaattatgaaaatattgcccAATTCTAAAACCTGA
- Protein Sequence
- MESFGSVFACNGNTYEQLSYIDLSDCSSSLSPQSLLSPGSSTLVMSPPAQQVPQEENLYDRMIDSNMFYDKTEVFKKPILKIIDQPTKEFRFRYKSETGTHGCISGRSRKKSFPAVQLLNYSKDAMIMCSLVQNNAKHDRHPHSLVVWKGDKEVTDPHEVLIGPHNKFIARFPNMAILFTGKKSIPEELLKYKKQLKNNSMSPEEEKHLKIMCENEAKSINLNSVCLKFSAFDNNHMLICDPIFSEAIDNSKSAETCQLKIVNISKTSGYCNGGEKIFLFVEKVNKKNIKVRFFEIVDDVKVWEDFAYFTELDVHHQYGIVFQTPAYHDLTITHDVNVFVELFRPKDSATSTEIQFRYKPMPRQNKKRRIEDDSEAISAEELFSYLPNREIPQADVPIFVHNFNEIQITPNGGFNHKEIENQRIPEDISQQKSYISHHNFIPSVEDFSIEQNRPNSGAMEIERLLHEYTQELFPLENTEMNSCVFFDPILSSSNIVSDAPQNNSKRSSKDNENNINLKELAEMLENMHEKLQMCESSKKLNEKCQTMYRGNDLTKLGLVNVMAQLYKEVPIVQCYLEKILEDGLSDGETFLHLLVTIDEKSFLKSILDFMNECKLFTCIHGVNKQQETALHRAVNFQRLDLIDLLLTSGCNPNLCDENGNTPMHLSIINANYDCLEHLLAHKNSASSLDLNICNNDGYSPIHIAFMSASIEVIDLLMNSGANTELEVSTDGRTILHLAVERGDLKMVSFIVEKALVPINAMTYKDFTPMHSVCVSKNENAIDICKYLLENGANPLIKYDKNFISSLAANNNNSQIAELIEEYIEKSNNIKSETDDFLDENTITTISNLLDKSGKWRQVAENLGFQSIISVCEQSESQSSSPSAILLNNIEMEQNISAQDLYKLFKNLGINDAAEEIMKILPNSKT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00814876;
- 90% Identity
- -
- 80% Identity
- -