Hbet295790.1
Basic Information
- Insect
- Hydropsyche betteni
- Gene Symbol
- Rel
- Assembly
- GCA_028571205.2
- Location
- JAOXNN020241665.1:2337-6645[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-35 2.1e-30 109.9 0.2 1 168 80 250 80 251 0.85 2 2 1.1 1.1e+05 -3.0 0.0 81 101 857 877 852 883 0.78
Sequence Information
- Coding Sequence
- ATGGAATCGTTCGGAAATGTGTTTGCTTGCAACGGAGATACATACGAACAACTTAGTTACATAGACTTAAGCGATTGCAGTTCTTTATTGTCTCCGCAGTCATTACTATCGCCTAGTTCTAGTACTCTGGTAATGTCCCCACCAGCTCAGCAAGTTCCacaagaagaaaatttatatgatagaaTGATAGATAGCAATATGTTTTATGACCAAACAGAAGttttgaaaaaaccaattttgaaaatcatcgacCAACCTACGAAAGAGTTTAGATTCCGATACAAAAGCGAAACTGGCACACATGGATGTATATCGGGAAGGTCACGTAAAAAATCGTTTCCAGCGGTGCAGctcttgaattattcaaaagatgCCATGATAATGTGCTCGCTAGTACAAAATAATGCGAAACATGATCGGCACCCACACAGTTTGGTCGTTTGGAAAGGAGACAAAGAAGTTACCGATCCCCATGAAGTTTTAATAGGCtctcataataaattcattgcAAGGTTTCCCAATATGGCCATATTATTTACGGGAAAAAAGTCAATTCCAGAAGaacttttaaaatacaaaaaacaattaaaaaataattcaatgtcaCCCGAGGAAGAAAAAcatttaaaaatcATGTGCGAGAACGAAGCTAAAagtatcaatttgaattcaGTATGCTTGAAATTTTCTGCCTTCGATAACAATCACAGGCTTATTTGTGATCCCATATTTTCTGAAGCTATCGATAATTCtaAAAGTGCTGAAACATGTCaactaaaaattgtaaatattagtAAAACATCAGGATATTGTAACGGCGGTGAAAAGGTTTTcttgtttgttgaaaaagtcaataaaaaaaatatcaaagtaagatttttcgaaatcgtcgaTGATGTAAGAGTATGGGAAGACTTTGCATATTTCACAGAACTTGATGTTCATCATCAATATGGGATTGTTTTTCAAACACCAGCGTATCGCGATCTCAACATAACACATGACGTGAACGTTTTTGTAGAACTTTTTCGACCCAAAGACAACGCAACCTCTACAGAAATACAATTCCGTTACAAACCAATGCCACGCCAAAACAAAAGAAGACGCATCGAAGATGGCTCCGAAGTGATACCAGCGGAAGAACTATTTTCATACTTGTCCAACCGTGAAATTTCCCAGTCAGAAGTGCCCATATTTGTTAACAGTTTCAATGAAAtacaaGTGACACAAAACAGCGGATTTAACCATAAAGAGatagaaaatcaaagaattCCAGAAGACACATCTCAACAAAAAAGTTACATATCTCATCACAATTTTATACCCAGcattaatgatttttcgattgaacAAAATAGGCCAAATTCAGGTGCTAtggaaattgaaagatttttacatgaattcacaaaagATTTTTCCCCAATCGATAATACAGAAATGAACTCGTGCGTGTTCATCGATCCTATTTTATCGTCAAGTAATATTGTGAGTGACGCTcctcaaaataataacaaaaggCCGTCTAAAGATAACGggaataatattcatttgaagGAATTGTCTGAAATGGTGAACGTTATggcacaattatataaaaaagttccgactgttcaattttatttggagAAGATTCTTGAAGACGGATTATCTGATGGAGAAACTTTTCTTCATCTGCTTGTGactattgatgaaaaatcacttttaaagTCAATCTtagattttatgaatgaatgtAAACTATCCACGTGTATCAACGGTGTGAACAAACAGCAAGAAACGGCTTTACACAGAGCAGTTAATTTTCAGCGAttggatttgattgatttattgctTTCATCTGGTTGCAATCCGAACATATGTGACGAAAATGGTAACACTCCAATGCATCTGTCTATTATAAACGCTAATTACGATTGTTTACAACATCTATTGGCATATAAAAATTCTGTACCTTTGTTGGATTTAAACATTTGTAACAACgATGGTTATAGTCCAATACATATAGCTTTTATGAGTGCTTCAATCGAAGTTATCGATTTACTGATGAATTCAGGTGCTAATATAGAGTTGAGAATTTCAACAGATGGGCGAACGGTATTGCATCTCGCAGTCGAGAGGGGAGATTTAAAAATGGTTTCGTTCGTAGTAGAAAAGGCGCTGGTGCCAATAAACGCAACATCGTATAAAGATTTTACCGCTTTGCATTCTGTATGCATTTCCAAGAATAAAAATGCGATCGATATTTGCAAGTATCTTTTGGAAAATGGAGTGAAtcctttaataaaatacgacaaaaactTTATATCATCTTTAGCTGCAAACAACGAAAATTCTCagattgcaGAACTTATCGATGAGTATATTAAAAAGAGCAATACTATAAAACTGGAGACCGATGATTTCTTGGACGAAAATACTATGATAACTATTTCAAAACTGCTAGATAAATCTGGTAAATGGAGACAGGTAGCTGAAAATTTAGGTTTTCAATCCATAATTTCAGTGTGCGAACAATCGGAAAGTCAATCCAGCAGTCCTAGTGCCATCCTCTTAAATAATatcgaaATGGAACAAAATGTATCTGCACaagatttacataaattatttacgaatcTTGGAATTAACGATGCTGCTGaagaaatcatgaaaatattaccCAATTCAAAAACATGA
- Protein Sequence
- MESFGNVFACNGDTYEQLSYIDLSDCSSLLSPQSLLSPSSSTLVMSPPAQQVPQEENLYDRMIDSNMFYDQTEVLKKPILKIIDQPTKEFRFRYKSETGTHGCISGRSRKKSFPAVQLLNYSKDAMIMCSLVQNNAKHDRHPHSLVVWKGDKEVTDPHEVLIGSHNKFIARFPNMAILFTGKKSIPEELLKYKKQLKNNSMSPEEEKHLKIMCENEAKSINLNSVCLKFSAFDNNHRLICDPIFSEAIDNSKSAETCQLKIVNISKTSGYCNGGEKVFLFVEKVNKKNIKVRFFEIVDDVRVWEDFAYFTELDVHHQYGIVFQTPAYRDLNITHDVNVFVELFRPKDNATSTEIQFRYKPMPRQNKRRRIEDGSEVIPAEELFSYLSNREISQSEVPIFVNSFNEIQVTQNSGFNHKEIENQRIPEDTSQQKSYISHHNFIPSINDFSIEQNRPNSGAMEIERFLHEFTKDFSPIDNTEMNSCVFIDPILSSSNIVSDAPQNNNKRPSKDNGNNIHLKELSEMVNVMAQLYKKVPTVQFYLEKILEDGLSDGETFLHLLVTIDEKSLLKSILDFMNECKLSTCINGVNKQQETALHRAVNFQRLDLIDLLLSSGCNPNICDENGNTPMHLSIINANYDCLQHLLAYKNSVPLLDLNICNNDGYSPIHIAFMSASIEVIDLLMNSGANIELRISTDGRTVLHLAVERGDLKMVSFVVEKALVPINATSYKDFTALHSVCISKNKNAIDICKYLLENGVNPLIKYDKNFISSLAANNENSQIAELIDEYIKKSNTIKLETDDFLDENTMITISKLLDKSGKWRQVAENLGFQSIISVCEQSESQSSSPSAILLNNIEMEQNVSAQDLHKLFTNLGINDAAEEIMKILPNSKT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00815587;
- 90% Identity
- -
- 80% Identity
- -