Basic Information

Insect: Hycleus phaleratus
Gene Symbol: RREB1
Assembly: GCA_013841185.1
Location: JACDRP010000183.1:37012-46782[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00062 0.041 13.9 0.9 1 23 112 134 112 134 0.98

2 16 0.00029 0.019 14.9 0.4 1 23 151 173 151 173 0.98

3 16 4.1e-05 0.0027 17.6 6.4 1 23 179 201 179 201 0.98

4 16 4.6 3.1e+02 1.7 0.2 1 8 278 285 278 302 0.74

5 16 0.19 13 6.0 2.1 2 23 308 330 307 330 0.96

6 16 0.45 30 4.9 0.9 1 20 376 395 376 397 0.91

7 16 0.049 3.2 7.9 0.1 1 23 543 565 543 565 0.96

8 16 5.5e-06 0.00037 20.3 0.8 1 23 574 596 574 596 0.99

9 16 0.00056 0.037 14.0 3.1 1 23 602 625 602 625 0.97

10 16 0.00033 0.022 14.7 3.0 1 23 997 1020 997 1020 0.97

11 16 0.00038 0.025 14.5 0.5 2 23 1228 1249 1227 1249 0.97

12 16 0.085 5.7 7.1 6.3 1 23 1255 1278 1255 1278 0.97

13 16 0.0085 0.56 10.3 1.2 1 20 1311 1331 1311 1332 0.95

14 16 0.0067 0.45 10.6 1.1 1 23 1398 1421 1398 1421 0.95

15 16 0.011 0.75 9.9 0.4 3 23 1477 1497 1475 1497 0.93

16 16 0.0051 0.34 11.0 5.9 1 23 1503 1525 1503 1525 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00062	0.041	13.9	0.9	1	23	112	134	112	134	0.98
2	16	0.00029	0.019	14.9	0.4	1	23	151	173	151	173	0.98
3	16	4.1e-05	0.0027	17.6	6.4	1	23	179	201	179	201	0.98
4	16	4.6	3.1e+02	1.7	0.2	1	8	278	285	278	302	0.74
5	16	0.19	13	6.0	2.1	2	23	308	330	307	330	0.96
6	16	0.45	30	4.9	0.9	1	20	376	395	376	397	0.91
7	16	0.049	3.2	7.9	0.1	1	23	543	565	543	565	0.96
8	16	5.5e-06	0.00037	20.3	0.8	1	23	574	596	574	596	0.99
9	16	0.00056	0.037	14.0	3.1	1	23	602	625	602	625	0.97
10	16	0.00033	0.022	14.7	3.0	1	23	997	1020	997	1020	0.97
11	16	0.00038	0.025	14.5	0.5	2	23	1228	1249	1227	1249	0.97
12	16	0.085	5.7	7.1	6.3	1	23	1255	1278	1255	1278	0.97
13	16	0.0085	0.56	10.3	1.2	1	20	1311	1331	1311	1332	0.95
14	16	0.0067	0.45	10.6	1.1	1	23	1398	1421	1398	1421	0.95
15	16	0.011	0.75	9.9	0.4	3	23	1477	1497	1475	1497	0.93
16	16	0.0051	0.34	11.0	5.9	1	23	1503	1525	1503	1525	0.98

Sequence Information

Coding Sequence: ATGCAAGGCGTTGTCTTCATGCCCCAAAATCCGCAACAAGGCTCGCCGCCACCAAACAACACACTAGTTACCGATATTGTAACAATGGAAACATCATCCGAACCAAATGATTTAACCAAAGAGAAACAATTTAATAACCAAAGCAACAATCAGAACGACTCAGGCATTTATTCGATAACGAATTCAACAATTAATAGTGAATCACCAATGGAGACGACAATGAATACAACTCTACATTCCGATAATTGTGATAATTATGGTAGTGATTGTAGTAGGACGCCATCACCGCCAACAACAACAACAACACAAGATGAAGAACAACAAGAGAAACACTACATATGTCCGATTTGTGATAAAACTCTATTATCACAACACGAATTCACTTTACATATACGTTCGCATAATAACGAAACAATAACCGAATTAAATCACATCGATAATGATAAAGGCTTCACATGCCGTATTTGTTATAAAGTATTAAGTTCAAGTTCTAGTTTAGATCGGCATGTTTTAGTCCATAGTGGCGAACGGCCATTTCATTGTAAATATTGCGGCGATACCTTCACAACGAATGGTAATATGCATCGACATATGCGTACACATTCAAATAATAATATTAGTAATAATAATAATAATAATAATAAGTTTGATAATTACGAATCTGATGGTAGTATTGATAGTAGTCTTAGTACAAATTCTAAAAATACCGAATTTAATAATAATATTAACACAAAATTGGATCGAATCGAATCGAGGAAGCGTAAATTCGAGGAAGATGACGATATTGATGGTGATTATGATGAGAATCAATTCGATAACGACCAACAAATTTATAAATGTCCGGTTTGTGAACGGAATGATTTCAATTCGATTAAAGTTTTAGAGACCCATTTGGAGGATAATCATCCGGATTATCCAGTTAAATGTAATCAATGCAATCAAATCTTACAAAATCATAAAATGTTAACAATACATCGTACAACAATACATGATAATAATCAAACAAAACACCATGTATATGGTTTTAAAGATTTAACATTTGTTGATTTTTCTAGTGAGAAATTTCCACATATTGCACGTTATGAATGCGAAAAGAATTTACATAAAGTTAATAGTGGTTTACGTTTTCAATGTCGTAAATGTTCAAGAGCATTCCCATGTTCGAATTCATTAGAAATACATGAAAATGATTGTGTTTTAATTGATAATAATAATGGTTTAGATTTAACAAAAACACCAACAACAACAACAACAACAACCGCCCAATTATCGGAGAATGATATCAAAAGGAACGAATTCTTTTCGCGATTAAATCTACAAGACAACTCACCGGAGAAATCCAACACTATACCGCCAATATTGAATGAAACTTCAACGAAATTACGCCAACAATTATTAGCAAAAGCGATGAATTTAGAAACAACCAAAGATCTAGCCGATATACAATCGATAATATCGATGACAACAAATGGTAGTCTATTACAACAATTACAAACGAAAAATGATGGAATTTTAAACAAACAAAACGAACAGAACGATTATAATCGCCAAACTAACGATCAACAAGAAGAAGAAACGCAAGATTTATTCGCAGTCGAATTTCGGAAGATGAAACTACGCGGGGAATTCCCCTGTCGCTTATGTACAGCAGTATTTCCGAATTTGCGCGCGTTAAAAGGCCACAATCGCGCCCATTTAAACAGTAATAATAACGGTATGTATCGGTGTAATATGTGTCCACATTCATCGATTGATAAAGCGGCGTTAATACGCCATATGCGTACACATAATGGTGATCGGCCCTATGAGTGTTCGTTGTGTAATTATGCGTTTACAACGAAAGCGAATTGTGAACGTCATTTGCGGAATCGTCATGCGAAATCGACACGTGAAGAAGTCAAAAAATCGATAATCTACCATCCATCAGAAGATCCAACTAATGAAGATTTAAATAAATTGGCACGTGATGATCGTAAATTGAATCTAACAAGTGGTGATTCTTCCAGTGATTTATCTACAGAAAAACTTGTAACTAAACGTAATAATAACGATGGATTTATACCGAATTTATTGAAAGAAACTCTACAGAAAGACACGAAAATTTTCCACCACAACATCACCGATATTATCCGTAATGAGAATATAAAATCATTGAAAGATCACAGTATTGAAAATGGACAATTATCGCCGTATTTACCACAATATAATTATTCACCGAAAAATTCGAATATTTCAACCCCCACAACAACGCATCCCCCATCGAAGATTCAAGTGAAAAGTTTGGAAACTCTAAAAGAACCGAATTTCGATGATAACCATTCCGATTCCGATAATAATGATAATGAAGATGAACCGATGGTGTTGGATTTGAGTAAAAAACGGATCGATGAGGAAATAGTACCGGAGGATTTATCGAGAAAATCGTTAACACCACCATCATTATTATTGCCACCGCCACCAACTCAATTGAATATGGGTGAAATTTTTGCTCAACAATTATTGAAAACAACACCACCGAAAATTGATCCGGCCGCTTTATATGCAACCCAATTGGCTTTAGCTAGGAATAGTTTTGCTAGTTTTGGAAATTGGCCCGGTTTTCCGATCAATCATCTATTATTTCAATCGTTACAACAACCGATTTTATCACAAGATACCCAGGATATTAAAGAACGTTTACAACGCTATCAATTGTGTGGTGGTGGTAATTTGATTACCGATAATTTCACCGAACGTTTGAAGAGTTTACAGAATTTTCCAAATTATAAATTGACAACAAACGATACAAAAGAGAAGATTGATGATTTGAAACCGTTGAATATCGATACGAATTATAGCGAAAATTTGAATGTTAATCTACAAAGTCCGGTGGCAATAACGAAACAACAACCGGATCTAGTACAATCGCCGAATTCTGTTAAAATGGTGATAAAAAATGGTGTTTTAATGCCAAAACAGAAACAACGCCGTTATCGAACTGAACGTCCATTCACATGTGAACATTGTTCAGCTCGATTTACATTACGTTCAAATATGGAACGGCATATTAAACAACAACATCCACAATTTTGGTCGCAACGACAACGCGGTCTTGGTACACCTGGACGGAAAATACAAACAACACCTGTTAAAGGCTATTGCGATATTAATATACCGAATTATGAATCGCAAAAGAGCTCAGATATGGACGATACAACAACATTAGCAACAATTAAAACCGAACAAATCGATGAGAAATTGAAATTCGCCCTATTATCACAACATCTACAAGCCAATAACGATATCAAGAAGGAAGAAGAAGATGATTGTGCCTTAATTATCGATGAGAATTTAGAGAAAGAGGATAAAAATCGAATTTTGGAAGATAAACTCCGAGAACTCCATGCGAAACAATTGAAGAATGATAGTAATAAATTGATAAAACAGGAAGAAAATCAAGATCTTGTATCTGTATCTCGATTATTAGATAACGCGTCACAACAACAATTCAAAGAATATTTCAAACGTGAAGGTGAAGAACAAGAAACTGGCGGTGGTAGTGAAGAAGATGAGGAAGGTTTAATCGCTAGCGGTAGTACTAGTGAAGGCAATATTTCCGGTACCGATGAAAATAGATCTGAATCTGAAGCTCCACCACCAGTGAAGAAGAAATCAGCGTATTCGATGGCGCCAAATCGCGTTAGTTGTCCATTTTGTAGCCGAAAATTCCCGTGGAGTTCATCATTACGTCGCCATATTTTAACCCATACTGGTCAAAAACCGTTCAAATGTAGCCATTGTCCATTATTATTTACAACGAAATCGAATTGTGATCGACATTTGTTGAGGAAACATGGCAATTCAGCTACAACAATAATCAACGATATTACCAATAATAATAACAATAATAATAATGCGAATTATTTGATGAGGAATGTGCCCGAACGGCCGTTCAAATGCTCAAATTGTCCAAGTAGTACATTTTCGACGTATTCGAATTTAAAGAAACACATCAGTTGTAAGCATTCAACGAATGCTCAAGGCGACGATATTCGGGCGCAAGGCTACGAGGCTGGTAGTTCAGAAGATGAGAAACTCTCAACTGAATCTTTACAACAACCCCAACAACAACAGAAAACAACAAACGAATGGAATGATAACCAAATCAATCACATAAAAACTGAAACAATTATAACAAATTCCGATTTACCGTTCAAATGCCATTTGTGTGACGGTTCATTTAGCGACCGTCAGGACGCTTTAGATCACATCAAAGACAAGCATTTCTCCGAATACGATTTATTGATGTCGAAAAACGCTTTAGATAGTACGGCAACGGTACCAACGACAACACCAGCAACGACAACAACAACCGATGACCATCATAATGAAGATGAAGAGAACGATATTCGTGGTAAATTCCCCGATTATTCGAATCGTAAAGTGATTTGTGCCTTTTGTATGCGTCGTTTTTGGTCGGCGGAAGATCTACGCCGACATATGCGCACCCATACCGGTGAACGTCCATTCAGTTGTGATATTTGCCGGCGTCGATTTACGTTAAAACACAGCATGTTGCGGCATCGTAAGAAGCATAATGTTAATTTCGATCATGACAATTGTAATAATAGTGATGATGATAATTTAGAGAAATATAGTAAAGGTCTTATTAGTGGTGGTGGGATCGGTGGTGGTGATAATTTCAAACATGGGGATAAAACTGAGGAATCTGATGGTAATGAAGGTGGTGATTTAATTAGTAATCTATTAGGTATAAGGGATCGGTCGTTTATTGATAAAGTGTTAACGGCATCGCCTGATGATGTTGCTAAACTATTGGGTGTTAAAAATGGTATTAAAGAATAA
Protein Sequence: MQGVVFMPQNPQQGSPPPNNTLVTDIVTMETSSEPNDLTKEKQFNNQSNNQNDSGIYSITNSTINSESPMETTMNTTLHSDNCDNYGSDCSRTPSPPTTTTTQDEEQQEKHYICPICDKTLLSQHEFTLHIRSHNNETITELNHIDNDKGFTCRICYKVLSSSSSLDRHVLVHSGERPFHCKYCGDTFTTNGNMHRHMRTHSNNNISNNNNNNNKFDNYESDGSIDSSLSTNSKNTEFNNNINTKLDRIESRKRKFEEDDDIDGDYDENQFDNDQQIYKCPVCERNDFNSIKVLETHLEDNHPDYPVKCNQCNQILQNHKMLTIHRTTIHDNNQTKHHVYGFKDLTFVDFSSEKFPHIARYECEKNLHKVNSGLRFQCRKCSRAFPCSNSLEIHENDCVLIDNNNGLDLTKTPTTTTTTTAQLSENDIKRNEFFSRLNLQDNSPEKSNTIPPILNETSTKLRQQLLAKAMNLETTKDLADIQSIISMTTNGSLLQQLQTKNDGILNKQNEQNDYNRQTNDQQEEETQDLFAVEFRKMKLRGEFPCRLCTAVFPNLRALKGHNRAHLNSNNNGMYRCNMCPHSSIDKAALIRHMRTHNGDRPYECSLCNYAFTTKANCERHLRNRHAKSTREEVKKSIIYHPSEDPTNEDLNKLARDDRKLNLTSGDSSSDLSTEKLVTKRNNNDGFIPNLLKETLQKDTKIFHHNITDIIRNENIKSLKDHSIENGQLSPYLPQYNYSPKNSNISTPTTTHPPSKIQVKSLETLKEPNFDDNHSDSDNNDNEDEPMVLDLSKKRIDEEIVPEDLSRKSLTPPSLLLPPPPTQLNMGEIFAQQLLKTTPPKIDPAALYATQLALARNSFASFGNWPGFPINHLLFQSLQQPILSQDTQDIKERLQRYQLCGGGNLITDNFTERLKSLQNFPNYKLTTNDTKEKIDDLKPLNIDTNYSENLNVNLQSPVAITKQQPDLVQSPNSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQFWSQRQRGLGTPGRKIQTTPVKGYCDINIPNYESQKSSDMDDTTTLATIKTEQIDEKLKFALLSQHLQANNDIKKEEEDDCALIIDENLEKEDKNRILEDKLRELHAKQLKNDSNKLIKQEENQDLVSVSRLLDNASQQQFKEYFKREGEEQETGGGSEEDEEGLIASGSTSEGNISGTDENRSESEAPPPVKKKSAYSMAPNRVSCPFCSRKFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNSATTIINDITNNNNNNNNANYLMRNVPERPFKCSNCPSSTFSTYSNLKKHISCKHSTNAQGDDIRAQGYEAGSSEDEKLSTESLQQPQQQQKTTNEWNDNQINHIKTETIITNSDLPFKCHLCDGSFSDRQDALDHIKDKHFSEYDLLMSKNALDSTATVPTTTPATTTTTDDHHNEDEENDIRGKFPDYSNRKVICAFCMRRFWSAEDLRRHMRTHTGERPFSCDICRRRFTLKHSMLRHRKKHNVNFDHDNCNNSDDDNLEKYSKGLISGGGIGGGDNFKHGDKTEESDGNEGGDLISNLLGIRDRSFIDKVLTASPDDVAKLLGVKNGIKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00813899; iTF_01022475;
90% Identity: iTF_00813899;
80% Identity: -