Basic Information

Insect: Hycleus phaleratus
Gene Symbol: -
Assembly: GCA_013841185.1
Location: JACDRP010000385.1:36469-41921[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 0.0028 0.19 11.8 2.0 2 23 193 215 193 215 0.95

2 21 1.6 1e+02 3.1 2.1 1 21 324 344 324 345 0.92

3 21 0.49 33 4.7 6.4 1 23 374 397 374 397 0.92

4 21 0.52 35 4.6 0.1 5 19 407 421 405 424 0.91

5 21 0.0091 0.6 10.2 0.9 1 23 430 453 430 453 0.91

6 21 0.00022 0.015 15.3 0.3 3 23 535 555 534 555 0.98

7 21 0.019 1.3 9.2 0.8 1 23 572 593 572 593 0.93

8 21 9.5e-06 0.00063 19.6 0.4 2 23 597 618 596 618 0.96

9 21 3.5e-05 0.0023 17.8 0.2 2 23 649 670 648 670 0.97

10 21 0.011 0.74 9.9 0.3 1 23 701 724 701 724 0.97

11 21 1 69 3.7 0.4 2 23 738 759 737 759 0.95

12 21 6.4e-06 0.00043 20.1 6.5 1 23 804 826 804 826 0.98

13 21 0.0072 0.48 10.5 1.2 3 23 847 868 847 868 0.93

14 21 0.00042 0.028 14.4 1.6 1 23 894 916 894 916 0.98

15 21 6.8e-05 0.0045 16.9 1.9 1 23 930 953 930 953 0.97

16 21 0.00013 0.0087 16.0 0.3 1 23 973 995 973 995 0.94

17 21 0.057 3.8 7.7 0.1 1 23 1030 1053 1030 1053 0.95

18 21 0.0032 0.21 11.6 2.7 2 23 1065 1086 1064 1086 0.97

19 21 7.8e-05 0.0052 16.7 0.5 1 23 1096 1119 1096 1119 0.96

20 21 1.3e-06 8.9e-05 22.2 0.6 1 23 1127 1149 1127 1149 0.98

21 21 0.00063 0.042 13.8 0.1 1 23 1162 1185 1162 1185 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	0.0028	0.19	11.8	2.0	2	23	193	215	193	215	0.95
2	21	1.6	1e+02	3.1	2.1	1	21	324	344	324	345	0.92
3	21	0.49	33	4.7	6.4	1	23	374	397	374	397	0.92
4	21	0.52	35	4.6	0.1	5	19	407	421	405	424	0.91
5	21	0.0091	0.6	10.2	0.9	1	23	430	453	430	453	0.91
6	21	0.00022	0.015	15.3	0.3	3	23	535	555	534	555	0.98
7	21	0.019	1.3	9.2	0.8	1	23	572	593	572	593	0.93
8	21	9.5e-06	0.00063	19.6	0.4	2	23	597	618	596	618	0.96
9	21	3.5e-05	0.0023	17.8	0.2	2	23	649	670	648	670	0.97
10	21	0.011	0.74	9.9	0.3	1	23	701	724	701	724	0.97
11	21	1	69	3.7	0.4	2	23	738	759	737	759	0.95
12	21	6.4e-06	0.00043	20.1	6.5	1	23	804	826	804	826	0.98
13	21	0.0072	0.48	10.5	1.2	3	23	847	868	847	868	0.93
14	21	0.00042	0.028	14.4	1.6	1	23	894	916	894	916	0.98
15	21	6.8e-05	0.0045	16.9	1.9	1	23	930	953	930	953	0.97
16	21	0.00013	0.0087	16.0	0.3	1	23	973	995	973	995	0.94
17	21	0.057	3.8	7.7	0.1	1	23	1030	1053	1030	1053	0.95
18	21	0.0032	0.21	11.6	2.7	2	23	1065	1086	1064	1086	0.97
19	21	7.8e-05	0.0052	16.7	0.5	1	23	1096	1119	1096	1119	0.96
20	21	1.3e-06	8.9e-05	22.2	0.6	1	23	1127	1149	1127	1149	0.98
21	21	0.00063	0.042	13.8	0.1	1	23	1162	1185	1162	1185	0.96

Sequence Information

Coding Sequence: ATGGCAGACTTCAGTACGTGCTGTAGACTTTGCCTTAGTGAGAAACTGGACACTATCAAGTCTATATTTGATGATGCTATAGATGATCGGACATTACAACAGAAAATTCTAGCCTCTGTTGCAATTGAAATAACATCTGGGGATAAATTGACAACAATGGTTTGCAATCAATGCATTGAAACTGTTGATAACTTTTATAATTTTAAGAAGTCGTGCTCGGAAAACCAGAAAAAGCTCGAAGAATGGCTCAAATTGAATTCTTCAGATACGAATATTCAAATCAAAGAAGAATCTATCGATACAGAACCACCACAATCACCTGATGTTATAATTAATGGTGAAATTCGTGCTGTTAAAATTGAACCAATTGATGATAGTGACGATGGTGGAGAACTTGTAGAAGATGCACCACCACCTTTAACACCACATGATCAACATAATGATGATAATGATAATGATGATGCGATGGATATAGAAGTTGTAGAGCCACAGAATGATAAGATTCAAGAAGATAAACATCAAGATAAAGAAAATCAGCAGAATAATGATGGACCGAATGTAGAGATAAATCCACGTAGATGTACAATTTGCGATAAAGACTTTTGTTCGGTTGCGAATCGTAAGAGGCATGAACGTGGAATCCATGGGATTGGAGTTACTACTAATGCTGAAGCTTCACCGTCTCAAGATGATCAGTCGCAGAGTTCATTGGATTCTCAACCGGTAGAAGAACCAACAGCTGAAGAAAAGAAAATCCTATTTGCTGCTGGTTTAAAACTCTTACAAACGAATTCAACACCGCCAATATCATTGGAGACACTATCAAAACTCGAATTAAGTTATATCGAAAAATGTAAAGCTATGGCTATAATGTATCGTTCATTAGTATGTGCTTGCCATAATGTACCCCATCCAAATTTGAAAGGTTTATTATCGCATTTACGTTCGATCGGTATCTGGTTTCCTGTATTTACATGTTATCAATGCATGATAACATTCACTGATCGTTCATCAAGTACACGCCATCATTTACGTTGCACACGTACGAATTTGGAAACATTGGTGAAATTGTCAAATTTGAAGAAACGCAGCGAAGTGAAAACACGCCTGTATCAGAATTATAAATGTACGAAATGTCGTTTCATGTACAGTTTCCATGAAGATTTTTGTAAACACGTCGATGAAGAACATTCTGATATAACATTTCCAATGACATGCACATGTGAACGGACATTTACAACTTTGGAAGATTATAAAGACCATGCTTATATTAGTTGTTTAGTTGATTTCTATTGTGATGTTTGTCATATCACTGTAAAAACATTGGATGCATTCCAGAAGCATGCTAGTGAGAATCACGATAATTCCGAAGGTTTTGCTTTGGTCCAGAAAGATGGTTATCGACAAAGACGTGAACGTACCTCATTACCAAATGCAATTTCCGTTAAACGTGAACATTCAGAAAACAACATTATCTACGGTAAACGCCGTAGTACATTCTATAAACGATTTGCCGACAGTGAAGAAGAGTACGCGAGTAGCGTAGGCAGTGGTAGTAAAGTCATCAATCCAATGGTTGTACAAAAAATCCCCGGCAAAATATGTCCGATATGTTCAAGGGAATACGTATCGAATAACAACATGTTGCGACACTATCGCAGCCATGAATTCGATGTTACAAATGATTCACAACAGAACAAAGATGATTCATTGTATTGTTGTCCGGATTGCGGTGGTATGTTTACATCGGAAGAATGGGAGAAACATAAAGAACAACACAAAAAGAAAGTCTGCAATGAATGTGGTAAAGTATTCCAATTCCAATCAGAATTGGAACAACATAGAAGCGTACATTTGAATCTTAAAGTTTATCGCGACTCGAAAACACAATCGTATCGAAGTACAATGGCAAGTCCGAATAATACCGACACGAATATTGTTGTTATGTGTGAAATTTGCGACACCATATTTCCGACAAAAGAACAATTAAAAGAACATAAATTAACACATGACTTGCCACCACAACAACAACAGCAGCAGCGGCAACAACACGATACAGAAGAAGAGGATAATCATAGCCTTGCTAGTAATGGTAAGAAATACAAATGTACACTTTGTAATAAAGGTTATGCTGCTTATGGTGGTTTATGGGAGCATAATCGGAAGAAACATCCGGAGAATAAATCGCCGTATTGTAAAGATTTCCCGAAAGAATGTAAGGCTTGTGACAAACTGTTTTACACTGGTGGTTCATGGTATATGCATAAAATGATGCACGAAAGGACACGCGATAATGTATTGGCAATCAAGCAACAGAAACAACAACAACAACAGAAAGCAACCCCATCGTCTTCATCGCAATATTCTCAAGTCGATGACGAAGCTGTCGATGATGATAGTGAATCGTATCATACATGTAAACGTTGTTTTAAAGTCTTTTCGAATCGTTATAATCTAAAGAATCACATGAAATCTCACGGCATCAATCTACACCCAGTTACAAAGACCAGTTTGAAGAGTAAAGGTAAAAAAGTATGGTGCGATGTTTGTCATACACCATTCGATAGTAGCCAACAATTACAACAACATAAATCTGAAGAACATGCAGAAACTGAAGACACAATGCCCAGTTTATCCGACGAACAAGAAGAAGTGGAAGTTAAAGCACCGTTTGTTGTATTCACTTGTGATGTTTGCGTACAAACATTCACAACGAAATTAGGATTGAAGAAACACAAAGAGAAACATGCACAAGAACGCGGTTTATTTATGCAACCAACAAAACGTTTCTATTGTAAATATTGTAAAATATCATTCATCAATTCGAATGAAATGAACTACCATATGCGTAACGAACATGATGAAACAGCCCAAGGACGGGCTAATGCAACCCGAATTAAAGAGAGAGCCAGGCATTTTGTTTGTAAAATGTGCAAGAAACCATTCCAGAGTTCATCGGCATTGTATGCACATTTGGGCTGGCATAAACGCGGTAAAGTTTACGAACAGTACGTGCCGGAAACACGGACACCAATCAAAGTGAAAATCAAACAAGAACCGATCGATGAAATCCCGGCGGTATCGCAATTTAAATGCAGTACATGCAAAGCTGTATTGCCGAATGATACAGCATTACAGATACATATTTTAGAGAAACATCGCGATATTAACGCGATTGTATTACCAACAACTAGATGTAATATGTGTAATTTGGATTTCAGTTCGCATGATGAATACGAACAACATAAACGTCTGCATAATATTGTGGAACAACCGAGGAAAACGTTTCCATGTAATCATTGTCCGGCTGCTTTCAGTCGTATTGAAACGTTGAATGCACATTTGAAACAATATCATTTAGATGACATTAAACAGGAATACAATTGTCCGCAATGCAATCGTGTTTTTGATAAACAAAGCTCGTTAACGATACATTTGAAAGTGCACGAGAAACAGCGGATGAATGCCCCATCTAGGCCGTTATTCTCATGCTCGATTTGTAATTTAGGCTTTAATCTACCGAAAGATTTACGAGCACACACCATTAAAGCTCATCCATTTTGA
Protein Sequence: MADFSTCCRLCLSEKLDTIKSIFDDAIDDRTLQQKILASVAIEITSGDKLTTMVCNQCIETVDNFYNFKKSCSENQKKLEEWLKLNSSDTNIQIKEESIDTEPPQSPDVIINGEIRAVKIEPIDDSDDGGELVEDAPPPLTPHDQHNDDNDNDDAMDIEVVEPQNDKIQEDKHQDKENQQNNDGPNVEINPRRCTICDKDFCSVANRKRHERGIHGIGVTTNAEASPSQDDQSQSSLDSQPVEEPTAEEKKILFAAGLKLLQTNSTPPISLETLSKLELSYIEKCKAMAIMYRSLVCACHNVPHPNLKGLLSHLRSIGIWFPVFTCYQCMITFTDRSSSTRHHLRCTRTNLETLVKLSNLKKRSEVKTRLYQNYKCTKCRFMYSFHEDFCKHVDEEHSDITFPMTCTCERTFTTLEDYKDHAYISCLVDFYCDVCHITVKTLDAFQKHASENHDNSEGFALVQKDGYRQRRERTSLPNAISVKREHSENNIIYGKRRSTFYKRFADSEEEYASSVGSGSKVINPMVVQKIPGKICPICSREYVSNNNMLRHYRSHEFDVTNDSQQNKDDSLYCCPDCGGMFTSEEWEKHKEQHKKKVCNECGKVFQFQSELEQHRSVHLNLKVYRDSKTQSYRSTMASPNNTDTNIVVMCEICDTIFPTKEQLKEHKLTHDLPPQQQQQQRQQHDTEEEDNHSLASNGKKYKCTLCNKGYAAYGGLWEHNRKKHPENKSPYCKDFPKECKACDKLFYTGGSWYMHKMMHERTRDNVLAIKQQKQQQQQKATPSSSSQYSQVDDEAVDDDSESYHTCKRCFKVFSNRYNLKNHMKSHGINLHPVTKTSLKSKGKKVWCDVCHTPFDSSQQLQQHKSEEHAETEDTMPSLSDEQEEVEVKAPFVVFTCDVCVQTFTTKLGLKKHKEKHAQERGLFMQPTKRFYCKYCKISFINSNEMNYHMRNEHDETAQGRANATRIKERARHFVCKMCKKPFQSSSALYAHLGWHKRGKVYEQYVPETRTPIKVKIKQEPIDEIPAVSQFKCSTCKAVLPNDTALQIHILEKHRDINAIVLPTTRCNMCNLDFSSHDEYEQHKRLHNIVEQPRKTFPCNHCPAAFSRIETLNAHLKQYHLDDIKQEYNCPQCNRVFDKQSSLTIHLKVHEKQRMNAPSRPLFSCSICNLGFNLPKDLRAHTIKAHPF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00987314;
90% Identity: iTF_00813875;
80% Identity: -