Hcor008462.1
Basic Information
- Insect
- Hormaphis cornu
- Gene Symbol
- Bgb
- Assembly
- GCA_017140985.1
- Location
- CM029365.1:14904975-14947351[-]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.16 1.6e+03 -1.3 0.0 101 134 3 36 1 39 0.78 2 2 5.3e-81 5.3e-77 257.3 0.4 1 164 47 210 47 212 0.98
Sequence Information
- Coding Sequence
- ATGTTGACGATGAACGACCTGGGCTCGATGGCCGCCGGAATGATGCCGTTCGATCCGATGTGCGGCGCGGGCATCTACGAGCACCAGCTGCAGCAGCAGCAGCAGCAGCAGCCGCCCAAGCCGCGGTTCGTGTTCAAAATGCCGCGCGTCGTGCCCGACCAGAAGAACAAATTCGAAACGGACGAGCTGTTTCGCCGTCTGAGCCGCGAGAGCGACGTGCGATACACTGGTTACCGGGACAGACCACACGAAGAACGCCAAAGTCGATTTCAAATCGGTTGTCGAGAAGGTCACGTAGATATTGCATTCATTTCGACTGGAACCAATTTGCAATTGATGTTTACTCCGAGCCTACCAATCGTTTCATACCACCAACCTGTAAATGGTTTTTGCGATTTCGAAAAAGAACGGGGAATGGTCCATATACTGTCTCACTTTATCATGAACGGAGTGTGCGTACGGTGGAAAGGACGCATCGATCTGGACAAATTGGACGGCGCCGGCTGCCTGGAGTTCGACGAGGAACGGGCGATGATCGAGAACAGGATGTTACAAGAGCAGATAGAACGATACAACGACCGTATCAGAGACTTTCAGGACAAACCTCGGGCTTATCGGAACCAAGAGCGCGGCGGCGGAGTGGACGACTCGGATTTGGACGTCAAAAGAAGATTGAACTACTAA
- Protein Sequence
- MLTMNDLGSMAAGMMPFDPMCGAGIYEHQLQQQQQQQPPKPRFVFKMPRVVPDQKNKFETDELFRRLSRESDVRYTGYRDRPHEERQSRFQIGCREGHVDIAFISTGTNLQLMFTPSLPIVSYHQPVNGFCDFEKERGMVHILSHFIMNGVCVRWKGRIDLDKLDGAGCLEFDEERAMIENRMLQEQIERYNDRIRDFQDKPRAYRNQERGGGVDDSDLDVKRRLNY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00135075; iTF_01032646; iTF_01031721; iTF_01303949; iTF_00972814; iTF_00135920; iTF_00463123; iTF_00340342; iTF_01328375; iTF_01305305; iTF_01346236; iTF_00418051;
- 90% Identity
- -
- 80% Identity
- -