Cced002602.1
Basic Information
- Insect
- Cinara cedri
- Gene Symbol
- Bgb
- Assembly
- GCA_902439185.1
- Location
- CABPRJ010001963.1:104631-140550[-]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.8e-79 9.6e-75 249.9 0.2 1 161 38 200 38 204 0.95
Sequence Information
- Coding Sequence
- ATGTTGATGATGAACGATTTGGGCTCGATGGCTGCCGGGATGTTGCCTTTCGACCCGATGTGCGGCGGCCTCTACGAACAACAGCCCCCCAAGCCCCGGTTCATATTCAAAATGCCGCGAGTCGTGCCGGACCAAAAGAACAAGTTCGAAACCGACGAACTTTTCAGGCGTCTGAGCCGCGAGAGTGACGTGCGATACACCGGTTACAGAGATAGACCGCACGAAGAACGCCAAAGTCGATTCCAAATTGGATGCCGCGAAGGTCATGTAGATATTGCGTTCACTGCGACTGGAACCAATTTACAGTTGATGTTTACCCCGAACATTCCTATTGCTTCCTACCACCAACCTATCAACGGTATATGCGATTTCGAAAAAGAACGGGGAATGGTTCACATACTGTCGCATTTCATAATGAACGGAGTTTGCGTGCGATGGAAAGGACGTATCGATTTGGACAAATTGGACGGCACCGGTTGTTTGGAGTTCGACGAAGAACGAGCAATGATCGAGAACAGAATGTTACAGGAACAAATCGAAAGATACAACGACCGTATCAGAGACTACCAAGACGACAAAGTACCCCGCGCTTACAGGAACCAAGGCCCGACGTTGTAG
- Protein Sequence
- MLMMNDLGSMAAGMLPFDPMCGGLYEQQPPKPRFIFKMPRVVPDQKNKFETDELFRRLSRESDVRYTGYRDRPHEERQSRFQIGCREGHVDIAFTATGTNLQLMFTPNIPIASYHQPINGICDFEKERGMVHILSHFIMNGVCVRWKGRIDLDKLDGTGCLEFDEERAMIENRMLQEQIERYNDRIRDYQDDKVPRAYRNQGPTL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00811729;
- 90% Identity
- iTF_00135075; iTF_01032646; iTF_01031721; iTF_01303949; iTF_00972814; iTF_00463123; iTF_01328375; iTF_01305305; iTF_00135920; iTF_00418051; iTF_01346236;
- 80% Identity
- -