Basic Information

Insect: Hoplodrina blanda
Gene Symbol: -
Assembly: GCA_949316365.1
Location: OX438573.1:2372736-2404855[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 3.2 2.3e+02 3.1 1.6 2 23 492 513 491 513 0.90

2 18 0.0022 0.15 13.1 0.0 1 23 523 546 523 546 0.96

3 18 0.15 10 7.4 1.6 2 21 672 691 672 692 0.94

4 18 0.046 3.2 9.0 3.8 2 23 755 776 754 776 0.95

5 18 0.99 69 4.7 0.7 1 23 788 812 788 812 0.91

6 18 0.00017 0.012 16.6 0.3 2 23 819 842 818 842 0.97

7 18 0.18 13 7.0 0.3 1 23 848 870 848 870 0.93

8 18 0.0044 0.3 12.2 2.9 1 23 876 898 876 898 0.98

9 18 0.68 47 5.3 0.5 2 20 909 927 909 929 0.90

10 18 0.044 3.1 9.0 0.4 1 23 1008 1030 1008 1030 0.97

11 18 2.6 1.8e+02 3.4 7.2 1 23 1037 1059 1037 1059 0.95

12 18 0.0018 0.12 13.4 1.8 1 23 1101 1124 1101 1124 0.95

13 18 0.0003 0.021 15.8 0.7 1 23 1131 1154 1131 1154 0.98

14 18 0.0049 0.34 12.0 0.2 2 23 1176 1198 1175 1198 0.96

15 18 0.015 1.1 10.5 4.2 3 23 1224 1245 1223 1245 0.95

16 18 0.00039 0.027 15.5 1.2 1 23 1270 1292 1270 1292 0.96

17 18 0.00016 0.011 16.7 0.1 1 23 1298 1320 1298 1320 0.97

18 18 0.00049 0.034 15.1 0.7 3 23 1328 1349 1326 1349 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	3.2	2.3e+02	3.1	1.6	2	23	492	513	491	513	0.90
2	18	0.0022	0.15	13.1	0.0	1	23	523	546	523	546	0.96
3	18	0.15	10	7.4	1.6	2	21	672	691	672	692	0.94
4	18	0.046	3.2	9.0	3.8	2	23	755	776	754	776	0.95
5	18	0.99	69	4.7	0.7	1	23	788	812	788	812	0.91
6	18	0.00017	0.012	16.6	0.3	2	23	819	842	818	842	0.97
7	18	0.18	13	7.0	0.3	1	23	848	870	848	870	0.93
8	18	0.0044	0.3	12.2	2.9	1	23	876	898	876	898	0.98
9	18	0.68	47	5.3	0.5	2	20	909	927	909	929	0.90
10	18	0.044	3.1	9.0	0.4	1	23	1008	1030	1008	1030	0.97
11	18	2.6	1.8e+02	3.4	7.2	1	23	1037	1059	1037	1059	0.95
12	18	0.0018	0.12	13.4	1.8	1	23	1101	1124	1101	1124	0.95
13	18	0.0003	0.021	15.8	0.7	1	23	1131	1154	1131	1154	0.98
14	18	0.0049	0.34	12.0	0.2	2	23	1176	1198	1175	1198	0.96
15	18	0.015	1.1	10.5	4.2	3	23	1224	1245	1223	1245	0.95
16	18	0.00039	0.027	15.5	1.2	1	23	1270	1292	1270	1292	0.96
17	18	0.00016	0.011	16.7	0.1	1	23	1298	1320	1298	1320	0.97
18	18	0.00049	0.034	15.1	0.7	3	23	1328	1349	1326	1349	0.95

Sequence Information

Coding Sequence: ATGACGGAGACTCAACCACCATTGATCCTATGCATGGAGAATGCGACGGGAGAGGATGTGGCTCTCAGGATAGAGCCAGACGATAACTTCCAGATGTTCCTCGATAAAGCCAGATCAATTTTAGGCTTTGATGTGGACCTGAACTCGATAACCAGAAACCAACCCGTCTCCCTATCAGAAAACGTTTACCAATTCCTAATTAATGCCGAACAAAACCTCCAAGCAGACGAGTTGACGCAAAACTTTGACCAAATGTTGGACACCAACGATGGAGCCAACGATTTGGTCTACATATTGGATGATGGCACACAAATTCGTGCTTCACAAATACATTTTGATAATGATGATCCTTTAGTCGATTTGACGGCTGAGAAAATACCCTTTGTGAAGTATGCGGATGATGTAAATGATATAGACTTAGATGATATTAATGTTCAGGAGACGAAAAAGATTAATATAGTTGAAAGTCCCGTCTCTCGATGGTCTAGTAAAAATTCTAGCCCAAAATGCAGTTTTGTCAACACTCTACCTTTCAAACTTGTATGCAATAACACTTCTGGTTTCGAAGCACAATTCACAAAATACCTAGAAGCAAACACAATGAAAACGTACGCGACTTTGAACCCTGTTACAACTCGCAATAAGTCTCCAAAAAGCTTGATAAAAGACAATTTTAAAAACTACGATGACAATTATCAGGGGAACGATAACCTGTCGTATACTCGGGAGGAGATTTTGAACATGTTCAAAGACTCCCCGATGACGTCATTGCCTTACGACCAGGGTTATAGCGAGAGGAGACATGTCCGGAAGACGGATCCGACGAGACTTGTTCATAAGAATTGGAGCAAGCCACTGTCTTACGTCGATATTGATCGAGTGTTGATTGGTGAAAGTGAGAGCCAAATCTGTTTTATTTGCGGGAAGCATGTTGATAATAACGTAGATAAGCTGTATCTTTTTGACAATGAAGATCAGAGGTTACACAGATGTTCGCCACAGAAAAAAATGTCGACtcaattaaaaattatctgCGAATGTTGTCTGAACGAAAACTTCACACCGTGCCGAATGAAGAGCGCTCATCAATTTCTAAACCCTGACGAATTCCTCGTCATAAGAAACAACCAACAATACATCTTTCAAAAAGTCAAAAACTTCAATTTCAATCATTTGTGTAAAGTCAAAGATATCATAAACAAGGTAGAGAAGAAAATAGACAAGGAAGAGTTTGTTAAAGTCGAAATTGGGTCTGACGGTGAAATTATAACTAAGCCCATAGACAACGATCCAAGGTCAGATGACGTCATTATTGTGAAGGATGAGAAGAAGGAGGGTAGTTCGAGTGACGTAGAGATTGTAGAGCCGGAACCGGAAATAGATCATATCATAGACAATTTGGAGGAAGCTGATGAGGAAGTGAAAGAGTTTTTGGGGAAATATCAGTGCGATAATAGTGATGTCACTGAATTGAAATGCAGGTTCTGTGAGCAGATATTCTCAGATCTGCAGGAGGTGACGGATCATTGTGAGACTCATAAACATGACCTTGAGGACGGCGAGGTGTTCCCGTGTCCACTCTGCAATTATGGTTATGCAAATTTAAAATGGCTGAAAGGTCATATGAAGGCGGCGCACGAGAAGACAGAAACagaaaaagaaatgaaagaaGTAATTGAAACAATGAAAGAggaaaataaagatgatgatgaaaaatcGCCTAAAGCGTCATCACCGATTGCTACTCGCACTAGAAGTTCTAGTAATAAAAAGGGAGAGGGCGATAGAAAAGAGAACGACTCGCCGGAAGACACAAAACCAGATTCTAATACTGAGGCGACGGAGCCACCCATCATAAAAACAGAGGTAAAGCAAGAATGCCTGGACAGCAGTGAAGATGAGATCTGGATTGTCCAGACTGCTGATGCAGAAGCCACGCAGGAGCTGCAGAAATTACTCTGTAGTAGCAAGGTTAAAGAAGACAGGCAAGATGGCGATTCAGATAAGACgccaaaatgttttaattgcaGTCAAATATTCGCGAACTCGGATGCTCTGTCAAGTCATCGCTGTAGGAGACGCAATCCTAAGCGGAAATCCAAAGACCTGGTGAACCTGATATGTATACCTACTGAGGAAGACTTCTTGAAAaGAGCTCAAGGACGGCCCCGACCGGCAGACTCATCAATAGACAATGATCTTCTAGTGATGcgTCCCAGGAAACGCCGCAACCGGGAACCGACCTCAAACCCCCAGATAGTGACCTGCCATAACTGCAACGAATCTTTTACGTCTAAAGTGAGACTCAAGTTTCATATGCAGTTCCACGAAACCTCAAACCTGGCACGGTCAGACGGTCGCTACTCCTGCTCGGAGTGTGATGACGCCACCTTCGCCACGGAAACAGAGCTGTTCGACCACGTGCACTTCCAGCATGACAAGCAGAAAAGATGGCAGTGTCCTGTCGAGGGCTGCGggaagaccttttttctcagggcAACCCTCACGAAACACAGTCGCACGCACACAGACACGCGCCGGTACGTGTGCGTCACGTGCGACAAACGATTCTTAGACAAACAGACGCTGGATGAACATGGAGTGACGCATTTACAGATCAAACCCTTCCAATGCCACATATGCCTGAAACAGCTGACGCGTCGCTCGCGCCTGCGCATGCACGTGCGCGCGCACGAGGAGGAGCTCGCGCCGCGACTCGTGCGCGTCTGTGCTGTCTGCACGAGGGCATTTAGAGATCACCGGCATGCACAGGAACACGCGTCCAAATCGACGGAGTGCATCGAGGCGTTCGCGAATGAGTTGAAAGAGGAGGCGGAGGAGGTGTCCGTGCAGCTGTCCCCCACCAGCGGACTCGTGCGGCACACTGTGCAAATTATCGAATCCCCGAAGCTGTCGAAGCCGATCAAGCGCCAGGTGTCAAGCGAGGTGGGCGAGCCGCTGCTGAGCCAGCTGGCGGACGAGGCCAGGGCGCTCATACGAGTCGTGGAGATCGAGAAGGCGTTCAGATGCGAGTACTGTGAAGACGTGTTCTACTTGGAGAGCGGTCTAAACAATCACCGCACCATACACAAGGGAGTGAAGAATCCCTTTACCTGCCACATCTGTAAAGTTAGCTTCGCTACCTATTCcagGTGTACAACCCATAAAACGACCCACGGCTTCTACAAACGCTCGTTAGCCGACGCTAAGAAGCACGCGGACGCGCCCGCACGCGCAGACGCAGCCGCCCCGTCCGCCACCGGGATACTGGGGTACGGGGACTTTCCTGTCGTCAAACACTTTTTATGCGAGGACTGCGGCCGCTCGTACCTGCACTGGACCTACCTACAAGTACACAGACGCATGAAGCACGCGAACGACAACTTCCTGTACAAGTGTAACCAGTGTGAACTTACCTTTCCTAACAGTTGGAGCCTGGCGTATCATCGTAAGAAGGTGCACGGCAAGTCAGGAACTGATGAGCCTGGAGCCACCAACAAGAACAGCAGGGAAGACTACAGGATACCGTGTCGAGATTGTGACGAGGTTCTGCCGAATAAAACAGCTTTATACAAACATCGTAAGAAAGAACACAGCGATGTCACCACACGAGCCTATTCCAAACCAGGCATGTACGCAAGCGCAGAGTCGGAATCTACGGGTGGTGCGTGTGCACATTGTCACGCCACGTTCACGCACGCGGCGGACTTGCACAAACACGTCAAagAAGTCCACGGCAAAGATGACGGATCATGCTTATCCTGCAACAAGACTTCAAGCTCAGAGACGGCGTGTCCGCGCCGTCCGCACGCGTGTCCGGTCTGCGGACATGCCTTCCGGACGCTGTCCATGAGGAACGAGCACCTGAGGGTGCATACGGGGGAGAGGCCCTTTCCCTGTGACGTCTGCGGAGTAGCGTTTAGGAGGTCCACGGCCATGCGCAACCACCGGCTCATCCACACGGGCGTGCGCGCGTGGGCGTGCGGGCGCTGCCCCAAGCGCTTCCGCATCCGCTCCGACCTGCGCACGCACCTGCGGCTCAAACATCCCGCCACCATTGTCGTTGTTGAGATGTTAGGTCTAAACCCGACCCCCGAGGAAGTGTTGGACGTGCTTGCGTCACAGAACGTACCACACGACAAGCTTATAGAAATCACCAAGATGTCGTTCACTAAGGGCTCGACGAGTGTGATACCGACCTGCGCACGCGCACTCTCTGCTCTAAACAACGTGCCGCGCACGCACGTCGCGTGCATCAAGCCTACACCGTCCAGGATGTTAGACGAGTTCCAACCAGCACGCCGTGGTCGCGGTATCGCTAAAAACCCGCGGCGACCCAAGATATTACAGCGAGGTGACTCGGAGCCGCCCGATGACAATGCTTACCCCAGCGGAGAGGAGCTCTCAGATCTGAACATGCAACTGTTGCTTCGGGACGGCGTGCTCGTCAACGGCAGTCAAATGGTGCAGTTGCAACTAGACGACCACATACTGATGGAATAG
Protein Sequence: MTETQPPLILCMENATGEDVALRIEPDDNFQMFLDKARSILGFDVDLNSITRNQPVSLSENVYQFLINAEQNLQADELTQNFDQMLDTNDGANDLVYILDDGTQIRASQIHFDNDDPLVDLTAEKIPFVKYADDVNDIDLDDINVQETKKINIVESPVSRWSSKNSSPKCSFVNTLPFKLVCNNTSGFEAQFTKYLEANTMKTYATLNPVTTRNKSPKSLIKDNFKNYDDNYQGNDNLSYTREEILNMFKDSPMTSLPYDQGYSERRHVRKTDPTRLVHKNWSKPLSYVDIDRVLIGESESQICFICGKHVDNNVDKLYLFDNEDQRLHRCSPQKKMSTQLKIICECCLNENFTPCRMKSAHQFLNPDEFLVIRNNQQYIFQKVKNFNFNHLCKVKDIINKVEKKIDKEEFVKVEIGSDGEIITKPIDNDPRSDDVIIVKDEKKEGSSSDVEIVEPEPEIDHIIDNLEEADEEVKEFLGKYQCDNSDVTELKCRFCEQIFSDLQEVTDHCETHKHDLEDGEVFPCPLCNYGYANLKWLKGHMKAAHEKTETEKEMKEVIETMKEENKDDDEKSPKASSPIATRTRSSSNKKGEGDRKENDSPEDTKPDSNTEATEPPIIKTEVKQECLDSSEDEIWIVQTADAEATQELQKLLCSSKVKEDRQDGDSDKTPKCFNCSQIFANSDALSSHRCRRRNPKRKSKDLVNLICIPTEEDFLKRAQGRPRPADSSIDNDLLVMRPRKRRNREPTSNPQIVTCHNCNESFTSKVRLKFHMQFHETSNLARSDGRYSCSECDDATFATETELFDHVHFQHDKQKRWQCPVEGCGKTFFLRATLTKHSRTHTDTRRYVCVTCDKRFLDKQTLDEHGVTHLQIKPFQCHICLKQLTRRSRLRMHVRAHEEELAPRLVRVCAVCTRAFRDHRHAQEHASKSTECIEAFANELKEEAEEVSVQLSPTSGLVRHTVQIIESPKLSKPIKRQVSSEVGEPLLSQLADEARALIRVVEIEKAFRCEYCEDVFYLESGLNNHRTIHKGVKNPFTCHICKVSFATYSRCTTHKTTHGFYKRSLADAKKHADAPARADAAAPSATGILGYGDFPVVKHFLCEDCGRSYLHWTYLQVHRRMKHANDNFLYKCNQCELTFPNSWSLAYHRKKVHGKSGTDEPGATNKNSREDYRIPCRDCDEVLPNKTALYKHRKKEHSDVTTRAYSKPGMYASAESESTGGACAHCHATFTHAADLHKHVKEVHGKDDGSCLSCNKTSSSETACPRRPHACPVCGHAFRTLSMRNEHLRVHTGERPFPCDVCGVAFRRSTAMRNHRLIHTGVRAWACGRCPKRFRIRSDLRTHLRLKHPATIVVVEMLGLNPTPEEVLDVLASQNVPHDKLIEITKMSFTKGSTSVIPTCARALSALNNVPRTHVACIKPTPSRMLDEFQPARRGRGIAKNPRRPKILQRGDSEPPDDNAYPSGEELSDLNMQLLLRDGVLVNGSQMVQLQLDDHILME

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00121732;
90% Identity: iTF_00273868;
80% Identity: -