Basic Information

Insect: Hoplodrina ambigua
Gene Symbol: -
Assembly: GCA_949774945.1
Location: OX458991.1:1917659-1943009[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 3.2 2.4e+02 3.1 1.6 2 23 491 512 490 512 0.90

2 18 0.0022 0.16 13.1 0.0 1 23 522 545 522 545 0.96

3 18 0.16 12 7.2 1.6 2 21 671 690 671 691 0.94

4 18 0.045 3.3 8.9 3.8 2 23 754 775 753 775 0.95

5 18 0.97 72 4.7 0.7 1 23 787 811 787 811 0.91

6 18 0.00016 0.012 16.6 0.3 2 23 818 841 817 841 0.97

7 18 0.18 13 7.0 0.3 1 23 847 869 847 869 0.93

8 18 0.0043 0.32 12.1 2.9 1 23 875 897 875 897 0.98

9 18 0.66 49 5.3 0.5 2 20 908 926 908 928 0.90

10 18 0.043 3.2 9.0 0.4 1 23 1007 1029 1007 1029 0.97

11 18 2.6 1.9e+02 3.4 7.2 1 23 1036 1058 1036 1058 0.95

12 18 0.0017 0.13 13.4 1.8 1 23 1111 1134 1111 1134 0.95

13 18 0.00029 0.022 15.8 0.7 1 23 1141 1164 1141 1164 0.98

14 18 0.0048 0.36 12.0 0.2 2 23 1186 1208 1185 1208 0.96

15 18 0.015 1.1 10.5 4.2 3 23 1234 1255 1233 1255 0.95

16 18 0.00038 0.028 15.4 1.2 1 23 1280 1302 1280 1302 0.96

17 18 0.00015 0.011 16.7 0.1 1 23 1308 1330 1308 1330 0.97

18 18 0.00048 0.036 15.1 0.7 3 23 1338 1359 1336 1359 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	3.2	2.4e+02	3.1	1.6	2	23	491	512	490	512	0.90
2	18	0.0022	0.16	13.1	0.0	1	23	522	545	522	545	0.96
3	18	0.16	12	7.2	1.6	2	21	671	690	671	691	0.94
4	18	0.045	3.3	8.9	3.8	2	23	754	775	753	775	0.95
5	18	0.97	72	4.7	0.7	1	23	787	811	787	811	0.91
6	18	0.00016	0.012	16.6	0.3	2	23	818	841	817	841	0.97
7	18	0.18	13	7.0	0.3	1	23	847	869	847	869	0.93
8	18	0.0043	0.32	12.1	2.9	1	23	875	897	875	897	0.98
9	18	0.66	49	5.3	0.5	2	20	908	926	908	928	0.90
10	18	0.043	3.2	9.0	0.4	1	23	1007	1029	1007	1029	0.97
11	18	2.6	1.9e+02	3.4	7.2	1	23	1036	1058	1036	1058	0.95
12	18	0.0017	0.13	13.4	1.8	1	23	1111	1134	1111	1134	0.95
13	18	0.00029	0.022	15.8	0.7	1	23	1141	1164	1141	1164	0.98
14	18	0.0048	0.36	12.0	0.2	2	23	1186	1208	1185	1208	0.96
15	18	0.015	1.1	10.5	4.2	3	23	1234	1255	1233	1255	0.95
16	18	0.00038	0.028	15.4	1.2	1	23	1280	1302	1280	1302	0.96
17	18	0.00015	0.011	16.7	0.1	1	23	1308	1330	1308	1330	0.97
18	18	0.00048	0.036	15.1	0.7	3	23	1338	1359	1336	1359	0.95

Sequence Information

Coding Sequence: ATGGAGACCCAACCACCATTGATCCTATGCATGGAGAATGCGACGGGCGAGGATGTGGCTCTCAGGATAGAGCCGGATGATAACTTCCAGATGTTCCTCGATAAAGCTAGATCAATTTTAGGCTTTGACGTGGACCTAAATTCCATCACCAGAAACCAACCGGTCTCTCTATCAGAAAACGTTTACCAATTCCTTATTAACGCCGAACAAAACCTCCAAGCAGACGAGTTGACACAAAACTTTGATCAAATGTTGGACACCAACGATGGAGCCAACGATTTGGTCTACATATTGGATGATGGCACACAAATACGTGCGTCACAGATACATTTTGATAATGATGACCCTTTAGTCGATTTGACGGCGGAGAAAATACCTTTTGTGAAATATGCGGATGACGTAAATGATATAGATTTAGATGATATCAATGTGCAGGAGACGAAAAAGATTAATATAGTTGAAAGTCCCGTCTCTCGATGGTCTAGTAAAAATTCTAGCCCAAAATGCAGTTTCGTTAACACTCTTCCTTTTAAACTCGTATGCAATAACACTTCCGGATTCGAAGCACAATTCACAAAATATCTAGAAGCGAATACAATGAAAACGTACGCGACTTTAAACCCTGTTACTACCCGCAATAAGTCTCCAAAAAGCTTGATAaaagacaattttaaaaattacgatGATAGTTATCAGGGGAACGACAATTTATCGTACACTCGGGAGGAAATTTTGAACATGTTCAAAGACTCCCCGATGACGTCATTGCCTTACGACCAGGGTTACAGCGAAAGGAGACATGTCCGGAAGACGGATCCGACGAGACTTGTTCATAAGAATTGGAGCAAGCCTCTGTCTTACGTCGATATTGATCGAGTGTTGATTGGGGAGAGTGAAAGCCAAATCTGTTTTATTTGTGGGAAGCATGTTGATAATAACGTGGATAAGCTGTACCTTTTTGACAATGAAGATCAAAAGTTACACAGGTGTTCGCCACAGAAAAAAATGTCTactcaattaaaaattatctgCGAATGTTGTCTGAACGAAAACTTCACACCGTGCCGAATGAAAAGTGCTCATCAATTTCTAAACCCAGACGAATTTCTCGTCATAAGAAACAACCAACAATACATCtttcaaaaagtcaaaaacttCAATTTCAATCATTTGTGTAAAGTCAAAGATATCATAAACAAAGTAGAGAAGAAGATAGACAAGGAAGAGTTTGTTAAAGTCGAAATTGGGTCTGACGGTGAAATTATAACGAAGCCCATAGACAATGATCCAAGGTCTGATGACGTCATTATTGTGAAGGATGAGAAGAAGGAGGGTAGTTCGAGTGACGTAGAGATTGTAGAGCCGGAACCGGAAATAGATCATATCATAGACAATTTGGAGGAAGCTGATGAGGAGGTGAAAGAGTTTTTGGGGAAATATCAGTGTGATAATAGTGACGTCACTGAATTGAAATGCAGgtTCTGTGAGCAAATATTCTCAGATCTGCAGGAGGTGACGGATCATTGTGAGACTCATAAGCATGACCTTGAGGACGGCGAGGTGTTCCCATGTCCACTCTGTAATTATGGTTATGCAAATTTAAAATGGCTGAAAGGTCATATGAAGGCGGCCCACGAGAAGACTGAATCAGATAAAGTAGTAAAAGAAGTAATTGAAACAATGAAAGAGGAAAACAAAGatgatgatgaaaaatcTCCTAAAGCGTCATCACCTATTGCTACACGGACTAGAAGTTCTAGTAATAAGAAGGGAGAGGGCGATAGAAAAGAGAATGATTCACCGGAAGATACTAAAACAGATTCTAATACTGAGGCGACGGAGCCACCCATCATAAAAACAGAGGTAAAGCAAGAATGCCTGGACAGCAGTGAGGATGAGATCTGGATTGTCCAGACTGCTGATGCTGAAGCCACGCAGGAGCTGCAGAAATTACTCTGTAGTGGCAAGGTTACAGAAGAGAGGCAAGATGGCGATTCAGATAAGACgccaaaatgttttaattgcaGTCAAATATTCCCGAACTCGGATGCTCTCTCAAGCCATCGCTGTAGAAGACGCAATCCTAAGCGGAAATCCAAAGACCTGGTGAACCTgatatgtatacctactgaGGAAGACTTCTTGAAAagAGCACAAGGACGGCCCCGACCAGCTGACTCATCAATAGACAATGATCTCCTAGTGATGcGTCCCAGGAAACGCCGCAACCGGGAACCGACCTCAAACCCCCAGATAGTGACCTGCCACAACTGCAACGAATCTTTTACGTCTAAAGTTAGACTCAAGTTTCACATGCAGTTCCACGAAACCTCAAACCTGGCACGGTCAGACGGTCGTTACTCGTGCTCCGAGTGTGATGACGCCACCTTCGCCACGGAGACGGAGCTGTTCGACCACGTGCACTTCCAGCATGATAAGCAGAAGAGGTGGCAGTGTCCAGTCGAGGGCTGCGGGAAGACCTTTTTTCTCAGgGCAACCCTCACGAAGCACAGTCGCACGCACACAGACACGCGCCGGTACGTGTGCGTCACGTGCGACAAACGATTCTTAGACAAGCAGACGCTGGATGAACATGGAGTGACGCATTTACAGATCAAACCCTTCCAATGCCACATATGCCTGAAGCAGCTGACGCGCCGCTCGCGCCTGCGCATGCACGTGCGCGCGCACGAGGAGGAGCTCGCGCCGCGACTCGTGCGCGTCTGTGCTGTCTGCACGAGGGCCTTTAGAGATCATCGGCATGCACAGGAACACGCGTCCAAATCGACGGAGTGCATCGAAGCGTTCGCGAACGAGTTGAaagaggaagcggaggaggtgTCCGTGCAGCTGTCGCCCACCAGCGGACTCGTGAGGCACACTGTGCAGATTGCCGAATCGCCGAAGCTATCGAAGCCGATCAAGCGGCAGGTGTCGAGCGAGGTGGGCGAGCCGCTGCTGAGCCAGCTGGCGGACGAGGCCAGAGCGCTCATACGAGTCGTCGAGATCGAGAAGGCGTTCAGATGCGAGTACTGTGAAGACGTGTTCTACTTGGAGAGCGGGCTGAACAATCACCGCACTATACACAAGGGGGTAAAGAACCCCTTTACCTGCCACATCTGTAAAGTTAGCTTCGCCACCTATTCCAGATGTACAACCCATAAAACGACTCACGGCTTCTACAAGCGCTCGCTGGCCGACGCCAAGAAGCACGCGGACGCTCCCGCACGCGCTGACGCAGACGCAGCCGCGCCCTCCGCCCCCTCCGCCCCCTCCGCCCCCTCCGCCACCGGGATACTCGGATACGGAGACTTTCCCGTCGTCAAACACTTTTTATGCGAGGACTGCGGCCGCTCGTACCTGCACTGGACGTACCTACAAGTACACAGACGCATGAAGCACGCGAACGACAACTTTCTATACAAGTGTAATCAGTGTGAACTTACCTTTCCTAACAGTTGGAGCCTGGCGTATCATCGTAAGAAGGTGCACGGCAAATCAGGAACTGATGACCCTGGAGCCGCTAGCAAGAGCAGCAGGGAGGACTACAGGATACCGTGTCGAGATTGTGACGAGGTGCTGCCGAATAAAACAGCTTTATATAAGCATCGTAAGAAAGAACACAGCGATGTCACAACGCGAGCCTATTCTAAACCAGGCATGTACGCAAGTGCGGAGTCGGAATCTACGGATGGTGCGTGTGCGCATTGTCACGCCACGTTCACGCACGCGGCGGACTTGCACAAACATGTCAAAGAAGTCCATGGCAAAGATGATGGGTCATGTTTATCCTGCAACAAGACCTCGAGCTCAGAGACGGCGTGTCCGCGCCGTCCGCACGCGTGTCCGGTTTGCGGACATGCCTTCCGGACGCTGTCCATGCGCAACGAACACCTGAGGGTGCATACGGGGGAAAGACCCTTTCCCTGTGACGTTTGCGGAGTAGCGTTTAGGAGGTCCACGGCCATGCGCAACCACCGGCTGATCCACACGGGCGTGCGCGCGTGGGCGTGCGGGCGCTGCCCCAAGCGCTTCCGCATCCGCTCCGACCTGCGCACGCACCTGCGCCTCAAGCACCCCGCCACCATCGTTGTTGTTGAGATGCTAGGTCTAAATCCGACCCCCGAGGAAGTGTTGGACGTGCTCGCGTCACAGAACGTACCACACGACAAGCTTATCGAAATCACTAAGATGTCGTTCACAAAGGGTTCGACGAGTGTGATACCGACATGCGCCCGCGCACTCTCAGCTCTCAGCAACGTGCCGCGAACGCACGTCGCGTGCATCAAGCCTACACCCTCTAGGATGTTAGACGAGTTTCAACCAGCACGCCGTGGTCGCGGGATCGCTAAAAACCCGCGGCGACCCAAGATATTACAGCGAGGAGACTCGGAGCCGCCCGATGATAACGCTTACCCCAGCGGAGAGGAGCTCTCCGATCTGAACATGCAACTGTTGCTGCGGGACGGCGTGCTCGTGAACGGCAGCCAGATGGTTCAGCTGCAACTAGACGACCACATACTGATGGAATAA
Protein Sequence: METQPPLILCMENATGEDVALRIEPDDNFQMFLDKARSILGFDVDLNSITRNQPVSLSENVYQFLINAEQNLQADELTQNFDQMLDTNDGANDLVYILDDGTQIRASQIHFDNDDPLVDLTAEKIPFVKYADDVNDIDLDDINVQETKKINIVESPVSRWSSKNSSPKCSFVNTLPFKLVCNNTSGFEAQFTKYLEANTMKTYATLNPVTTRNKSPKSLIKDNFKNYDDSYQGNDNLSYTREEILNMFKDSPMTSLPYDQGYSERRHVRKTDPTRLVHKNWSKPLSYVDIDRVLIGESESQICFICGKHVDNNVDKLYLFDNEDQKLHRCSPQKKMSTQLKIICECCLNENFTPCRMKSAHQFLNPDEFLVIRNNQQYIFQKVKNFNFNHLCKVKDIINKVEKKIDKEEFVKVEIGSDGEIITKPIDNDPRSDDVIIVKDEKKEGSSSDVEIVEPEPEIDHIIDNLEEADEEVKEFLGKYQCDNSDVTELKCRFCEQIFSDLQEVTDHCETHKHDLEDGEVFPCPLCNYGYANLKWLKGHMKAAHEKTESDKVVKEVIETMKEENKDDDEKSPKASSPIATRTRSSSNKKGEGDRKENDSPEDTKTDSNTEATEPPIIKTEVKQECLDSSEDEIWIVQTADAEATQELQKLLCSGKVTEERQDGDSDKTPKCFNCSQIFPNSDALSSHRCRRRNPKRKSKDLVNLICIPTEEDFLKRAQGRPRPADSSIDNDLLVMRPRKRRNREPTSNPQIVTCHNCNESFTSKVRLKFHMQFHETSNLARSDGRYSCSECDDATFATETELFDHVHFQHDKQKRWQCPVEGCGKTFFLRATLTKHSRTHTDTRRYVCVTCDKRFLDKQTLDEHGVTHLQIKPFQCHICLKQLTRRSRLRMHVRAHEEELAPRLVRVCAVCTRAFRDHRHAQEHASKSTECIEAFANELKEEAEEVSVQLSPTSGLVRHTVQIAESPKLSKPIKRQVSSEVGEPLLSQLADEARALIRVVEIEKAFRCEYCEDVFYLESGLNNHRTIHKGVKNPFTCHICKVSFATYSRCTTHKTTHGFYKRSLADAKKHADAPARADADAAAPSAPSAPSAPSATGILGYGDFPVVKHFLCEDCGRSYLHWTYLQVHRRMKHANDNFLYKCNQCELTFPNSWSLAYHRKKVHGKSGTDDPGAASKSSREDYRIPCRDCDEVLPNKTALYKHRKKEHSDVTTRAYSKPGMYASAESESTDGACAHCHATFTHAADLHKHVKEVHGKDDGSCLSCNKTSSSETACPRRPHACPVCGHAFRTLSMRNEHLRVHTGERPFPCDVCGVAFRRSTAMRNHRLIHTGVRAWACGRCPKRFRIRSDLRTHLRLKHPATIVVVEMLGLNPTPEEVLDVLASQNVPHDKLIEITKMSFTKGSTSVIPTCARALSALSNVPRTHVACIKPTPSRMLDEFQPARRGRGIAKNPRRPKILQRGDSEPPDDNAYPSGEELSDLNMQLLLRDGVLVNGSQMVQLQLDDHILME

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00121732;
90% Identity: iTF_00273868;
80% Identity: -