Hpse011185.1
Basic Information
- Gene Symbol
- kn
- Assembly
- GCA_947369225.1
- Location
- OX376322.1:5324637-5337181[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-141 1.5e-137 459.8 0.0 183 387 5 227 2 230 0.99 2 2 5.3e-08 0.00042 19.1 8.0 414 551 230 375 227 391 0.59
Sequence Information
- Coding Sequence
- ATGTTTCTATTATTTTTTCTTAAATTCTTCCTGAAATGCAACCAGAACTGTTTGAAGAACGCTGGTAATCCGCGGGATATGCGAAGGTTTCAAGTGGTAATATCAACGCAAGTGATGGTCGACGGGCCCCTGCTGGCGATATCGGACAACATGTTCGTTCACAACAACAGCAAGCACGGCCGGCGAGCCAAGCGGCTCGACCCCACTGAAGGTATTGACGCCGCCAACGAGCCCACCTCGGGCCTATATCCTCCACTACCAGTGGCAACTCCTTGCATCAAAGCGATATCACCGAGTGAGGGGTGGACGTCGGGAGGATCAACAGTCATCATTGTTGGAGACAACTTCTTCGATGGTCTGCAAGTCGTTTTTGGGACAATGCTTGTTTGGAGTGAGTTAATAACGTCTCACGCGATAAGAGTACAGACACCACCGAGGCACATACCAGGAGTAGTAGAAGTGACGCTCTCGTACAAGAGTAAGCAGTTCTGTAAAGGAGCACCAGGAAGATTTGTTTACGTTTCAGCTCTCAACGAGCCGACGATAGATTACGGCTTTCAGAGGCTTCAGAAACTTATACCGAGGCATCCTGGCGACCCGGAGAAATTGCCAAAGGAAATAATCCTCAAACGAGCAGCCGATCTTGCTGAGGCCTTGTACGCCATGCCTCGCAACAACCAGTTGGGTCTGGGTGCCTCCCGCTCACCCCCGGCCAGCATGCCCTTCAACTCTTATACGGGACAGCTGGCAGTCAGTGTTCAAGACACTGCTGCATCGCAGTGGACTGAAGAGGACTACGCGCGCAGCGGCGGCTCGGTGTCGCCGCGCTACTGCTCAGCTGCGTCCACGCCACACGCCGCTTCTGCGTCCTACCCACATCCACAGCACTACCCCGCACCGCCCACATCACTATTTAATACTACCTCACTGTCTCTAGGCCCGTACCACCCCGCCAACGTGAATGGACATTTATCTGACCACTATAACGCGTATAATACGAAAGATAGCGCGCATTACACTGAAAGAAATTCTAAAAGCTCGACCGACTGTCCGGCAAACACTCATTCGAAATGCGGAGGTATGAAAGGGGAGGATAAAGAGACCAAGTTGAGAAGCGCCTTTGCTGTCGTGAGGCAGAGTCCACCTCGCGGCAATATGCAACACCACCACAATTGGCAGCATCTCGCCGTTCAGTGTTAG
- Protein Sequence
- MFLLFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGIDAANEPTSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYAMPRNNQLGLGASRSPPASMPFNSYTGQLAVSVQDTAASQWTEEDYARSGGSVSPRYCSAASTPHAASASYPHPQHYPAPPTSLFNTTSLSLGPYHPANVNGHLSDHYNAYNTKDSAHYTERNSKSSTDCPANTHSKCGGMKGEDKETKLRSAFAVVRQSPPRGNMQHHHNWQHLAVQC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00856390; iTF_00026632; iTF_00027548; iTF_00427882; iTF_00787408; iTF_00428787; iTF_01429721; iTF_01090474; iTF_00960721; iTF_00186930; iTF_00112300; iTF_00821563; iTF_00113920; iTF_00113877; iTF_00354875;
- 90% Identity
- iTF_00682157;
- 80% Identity
- -