Basic Information

Gene Symbol
kn
Assembly
None
Location
AY:674704-694183[+]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.3e-143 9.5e-140 466.3 0.0 180 387 5 229 2 232 0.99
2 2 1.6e-08 0.00012 20.3 7.3 420 555 238 386 230 405 0.63

Sequence Information

Coding Sequence
ATGAATCTGGTTTGTTTCAGATTTTTTCTCAAGTTCTTCCTCAAATGCAACCAGAACTGTTTGAAAAATGCTGGCAACCCACGAGATATGAGAAGGTTTCAAGTAGTCATATCGACCCAGGTGATGGTAGATGGCCCTCTGTTGGCGATATCGGATAACATGTTCGTCCATAACAACAGTAAACACGGACGGCGAGCGAAACGGCTTGACCCAACTGAAGGTACTGACGCCGCGCCTGAAACTGCTTCCGGTCTATATCCACCGTTGCCCGTAGCAACGCCGTGCATCAAGGCGATATCACCAAGCGAAGGCTGGACGTCGGGCGGATCGACTGTGATCATTGTCGGAGACAATTTCTTCGACGGGCTCCAAGTCGTCTTCGGTACTATGCTGGTTTGGAGTGAGTTAATAACATCTCATGCAATAAGAGTTCAAACGCCACCAAGACATATACCAGGTGTGGTGGAAGTAACACTATCGTATAAGAGCAAGCAGTTTTGTAAAGGTGCGCCGGGGAGATTCGTTTATGTTTCGCTGAACGAACCGACGATAGATTACGGGTTTCAGAGGCTACAGAAACTTATACCGAGACATCCCGGTGATCCGGAAAAATTACCGAAGGAAATAATTCTGAAACGAGCAGCGGATCTAGCAGAAGCCTTGTATTCTATGCCAAGAAACAATCAGCTCGGTTTAGGCACACCCCGGTCCCCTCCCGCCAGCATGCCTTTCAATTCCTACACCGGTCAGTTGGCCGTCAGTGTTCAGGACACTGCCGCATCGCAGTGGACTGAAGAAGAATACGCGCGCAGCGGCGGTTCTGTATCGCCGCGGTATTGTTCCGCGGCGTCGACCCCGCACGGCGCGCCCGCCGCCTACCCGCACCCGCAGCACTACCCCGCGCCACCCACCTCACTGTTCAACACTACCTCGCTGTCTCTAGGACCATATCATCCGACCAACATGAATGGGTTATCATCTGACCATCACTATAACACGTATAACACGAAAGATAGCGGACATTACAGCGAAAGAAATGGGAATTCTAAAAGCTTGGCTGACTGTCCGGCAAACATTCATTCGAAATGCACCGGGAACGATATGAAAGGGCTACAGAATAAAGACGCCAAGTCGAGAAGTGCCTTTGCGGTCGTGAGGCAGAGTCCGCCGCGCGTTACCAATGTTCACCAACAGAATTGGCAACATCTAGCTGTTCAGTGTTAG
Protein Sequence
MNLVCFRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGTDAAPETASGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGTPRSPPASMPFNSYTGQLAVSVQDTAASQWTEEEYARSGGSVSPRYCSAASTPHGAPAAYPHPQHYPAPPTSLFNTTSLSLGPYHPTNMNGLSSDHHYNTYNTKDSGHYSERNGNSKSLADCPANIHSKCTGNDMKGLQNKDAKSRSAFAVVRQSPPRVTNVHQQNWQHLAVQC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00806479;
90% Identity
iTF_00176893;
80% Identity
iTF_00113877;