Basic Information

Gene Symbol
kn
Assembly
GCA_035772565.1
Location
JAQQSE010000203.1:375950-389330[+]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.3e-142 1.7e-138 463.2 0.0 180 387 5 230 2 234 0.98
2 2 4.2e-08 0.00031 19.9 8.4 420 555 239 387 231 406 0.62

Sequence Information

Coding Sequence
atgtATCTGGTTTGTTTCAGATTTTTTCTCAAGTTCTTCCTCAAATGCAACCAAAACTGTTTGAAAAATGCTGGCAACCCTCGAGATATGAGAAGGTTTCAAGTAGTGATATCGACCCAGGTGATGGTGGATGGTCCTCTGCTGGCGATATCGGATAACATGTTCGTCCATAACAACAGTAAACACGGGCGACGCGCGAAACGGCTTGACCCAACTGAAGGTATTGACGCCGCGCCTGAAACTACTTCCGGTCTATACCCACCGTTGCCCGTAGCAACGCCGTGCATCAAGGCGATATCGCCAAGCGAAGGCTGGACGTCGGGCGGGTCGACTGTAATCATTGTCGGGGACAATTTCTTCGATGGACTCCAAGTCGTCTTCGGTACTATGCTGGTTTGGAGTGagCTAATAACATCTCATGCAATAAGAGTCCAAACGCCGCCGAGGCATATACCAGGCGTGGTCGAAGTAACACTGTCATACAAGAGTAAACAGTTCTGCAAAGGTGCGCCGGGAAGATTCGTTTATGTTTCAGCGCTGAACGAACCGACGATAGATTACGGGTTTCAGAGGCTACAGAAACTTATACCGAGACATCCTGGTGACCCGGAAAAATTACCGAAGGAAATAATCCTCAAACGAGCTGCGGATCTAGCCGAAGCATTATACTCCATGCCAAGAAACAATCAGCTCGGCTTAGGCACTCCTCGGTCCCCTCCCGCCAGCATGCCTTTCAATTCGTACACCGGTCAGTTGGCCGTCAGTGTTCAGGACACTGCTGCATCGCAGTGGACTGAAGAAGAATACGCGCGCAGCGGCGGTTCTGTATCACCGCGGTATTGCTCCGCGGCGTCCACCCCCCACGCCGCCCCCGCGTCCTACCCGCACCCGCAGCACTACCCCGCGCCACCCACATCATTGTTCAACACTACCTCGCTGTCTCTAGGACCATATCATCCGACCAACATGAATGGGTTATCATCTGACCATCACTATAACACGTATAACACGAAAGATAGCGGACATTACAGCGAAAGAAATGGGAATTCTAAAAGCTTGTCTGACTGTCCGGCAAACATTCATTCGAAATGCACCGGGAATGATATGAAAGGGCTACAGAATAAAGAGGCGAAGTCGAGAAGTGCCTTTGCGGTCGTGAGGCAGAGTCCGCCGCGCGTTACCAATGTTCACCAACAGAATTGGCAACATCTAGCTGTTCAGTGTtag
Protein Sequence
MYLVCFRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGIDAAPETTSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGTPRSPPASMPFNSYTGQLAVSVQDTAASQWTEEEYARSGGSVSPRYCSAASTPHAAPASYPHPQHYPAPPTSLFNTTSLSLGPYHPTNMNGLSSDHHYNTYNTKDSGHYSERNGNSKSLSDCPANIHSKCTGNDMKGLQNKEAKSRSAFAVVRQSPPRVTNVHQQNWQHLAVQC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00806479;
90% Identity
iTF_00176893;
80% Identity
-