Htri014936.1
Basic Information
- Insect
- Hirtodrosophila trivittata
- Gene Symbol
- Lztr1
- Assembly
- GCA_035045065.1
- Location
- JAWNNK010001028.1:8582166-8585950[+]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.1e-06 0.00061 20.2 0.2 1 46 553 599 553 611 0.84 2 4 1.8e-08 5.2e-06 26.9 0.0 48 108 627 694 617 696 0.84 3 4 0.18 53 4.3 0.2 78 108 696 726 691 728 0.89 4 4 1.6e-19 4.5e-17 62.5 0.1 8 97 787 876 781 914 0.86
Sequence Information
- Coding Sequence
- ATGCTAAGGTCCATACTCGGGGCGGACTCGAATGTTTCTGCGGAAGAACTACCAAGCGGAGGCGGTGGCGTCGCCAACGGCAGCAGTGgtagcggcagtggcagtgggagcgggagtgggagtgggagtagACACAGTGCTGGAGCACTTAGCCGAGCTGCTTGTGGCTTGGGCTCCAGTTCGATATCTAGTGGCTTGAGTGCTGTGTGTGGACGCCTGGTCTCAGGCAGTCGTGggagtggcagtggcagcgcaAGTGGTGGCAGTACCCCAGCAACAGTTTATTGTCCTATATGCGCAGGCAACGGTTCGCAGCAGCAGGTTGCATGCAGCTCCGGTGGTGAGGCATTGCCGCTGCGTGACTCGAAGACGGGTAAAAAGATTAAGCCGCGTAAAAGTGCCTCAACAGCTGGTTGTTTGGATGCCCACCACATACGCTACCATCTGAAAATGTCCACATCAAGCTCCATGCGCAGCACGCGCGCAAACGGCGCcggcagcagtagcagcagcagcaccgccTCCGCCGCCGTTCCCATCTccagcggctgcagcagcataGCATACGATCCCAGCAGTaacggcagcagcttcaacGGCAAGGCCATCTCGACAAGCAGCTTCAGTTGCAATGCCCTCAACGTCGACTTCAACTCCTATACGGCGACACATCAGTGGACCCGCATGTTGGAGTGTGCCGAATTTGTTGGCGCCAAACGGAGCAAGCATACGGTGGTTGCCTACAAGGATGCCATGTTCGTTTTCGGTGGCGACAATGGGAAGAACATGCTCAACGATCTGATCAGATTTGGAGTGAAGGACAAGTCATGGGGCCGCGCATGCGCAACGGGCACACCGCCAGCTCCACGCTATCATCATTCAGCTGTGGTGGCGGGCAGTTCGATGTTCGTCTTCGGTGGCTATACGGGCGATATACACTCCAACTCGAATCTGACCAACAAGAACGATCTGTTTGAGTATAAGTTTCTTAGTGCTATGTGGGTGGAATGGAAAACGCCGGGCAAACAACCTGTGCCAAGATCAGCACATGGAGCTGCAGTGTACGACAACAAGATGTGGATCTATGCTGGCTACGATGGAAATGCTAGGCTGAATGATATGTGGACATTAAACTTAACGGGGGAGAATCATCAATGGGAGGAGGTGGAACAGCAAGGCGATCGTCCGCCCACCTGCTGTAATTTTCCAGTGGCTGTCGCTCGCGATGCCATGTACGTGTTCTCTGGACAAAGTGGCTTGCAGATAACCAATTCGCTCTTCGAGTTTCATTTCAAGACGCGCACCTGGCGTCACATATCAAATGAGCCGGTGCTGCGTGGTGCCACATCGGCGCCACCTTCACGACGTTATGGCCATACCATGGTGCACCATGATCGctttttgtatgtgtttggCGGTTCGGCAGACTCAACACTGCCGAACGACTTGCACTGCTACGATCTGGACTCGCAGGTGTGGTCAGTTATACAGGCGGAGTTGAACTCCGACATGCCTTCGGGACGTGTGTTTCATGCTTCGGCAGTTATTGGCGATGCCATGTACATATTTGGTGGCACTGTGGACAACAGTGTCCGCCGCGGAGACACGTATCGTTTTCAGTTCTCCAGCTATCCAAAGTGCACACTGCGCGATGACTTTAGTAAGTTCTTTCATGAGAAACAATTCTGTGACATTCAGTTTTTGGTGGGCGTTGAAGAAGTCCGCATCCTGGCGCACATTGCCTTTGTTGCGGCACGTTCCAAGTATTTGCGCAACAAGATTTTGTCGGCCCGTGAGGCgctgcaacagcaaatggAGAAGTTGTATGGCGTGGGTCAAATAGATGGACTGGCCTTTAACACAGGCGTCGGAGCAGATCGTGCACCCATGCTGGAGGTGCGACTGGCGCATGCCTCGCCAGAAGCCTTCGAGATCATATTAAACTACATCTACACGGATCGCATTGATTTAAAGGATTCATACAGCAAGAACATAATCATACTCATCACAGACATCTATCAGCTCGCTGGACTGTTCACAATGCCGCGCCTGGCGCACGGCTGCATACAGTATCTCGACTACAAGATCAACAAGTTAAATGTCCTGGAGGCGCTCTACAATGCAGACAAACACAACATTAAAATCATCAAGGACCATTGCATGCAATTCATCATCAAGGAGGAGAATTTCACGGAAGTGGTCATGTCCAATGAGTTTAGTGATCTGGACAAGCCTCTGTTGGTCGAGATAATACGAAAACGTTTGCATCCCTGCAAACTAGTTATGGAGACCACCTATGAGCCTAATATTGGCACCACTCTGGAGCATGATATGTCCACATTCCTGGAGACAACGGGCAAAGAGTTTTGCGATATAAGCCTCATGTTGGAGGATAATGTGATACAGGCACACAAATCTGTGCTCTCTGCACGTTGTACCTATTTTCAGGGTATGTTTCGCTCGTTTACGCCTCCGGATAACTCGGTCAATATACAAATTGGAGAAATTTCACCCTCTTTGGAGTCCTTCGATTCATTGCTACGATATATTTATTACGGGGAGACAAAAATGCCGCCACAGGATGCGCTCTATTTATTCCAGGCACCTTGTTTTTACGGTTTATCCAATAATCGTTTGCATGCATTTTGCAAATATTCACTGGAGCATAATATTACGTATGAGAATGTATTGGAGACCCTGGAGGCTTCCGATATAACAAAGATCTATGACATCAAGGAGTACgcattgaaattaattgtGAAAGATTTTTCCAAAGTTGCCAGGCTACCCAAGATATCCTGTTTGTCGCGTGAACTGTTGCTGGAGATAATACGCGCTGTGGCCGATTCGCAAGGCGAGTTTCTGACCCGCATCAATATCAATACCGATATCTGA
- Protein Sequence
- MLRSILGADSNVSAEELPSGGGGVANGSSGSGSGSGSGSGSGSRHSAGALSRAACGLGSSSISSGLSAVCGRLVSGSRGSGSGSASGGSTPATVYCPICAGNGSQQQVACSSGGEALPLRDSKTGKKIKPRKSASTAGCLDAHHIRYHLKMSTSSSMRSTRANGAGSSSSSSTASAAVPISSGCSSIAYDPSSNGSSFNGKAISTSSFSCNALNVDFNSYTATHQWTRMLECAEFVGAKRSKHTVVAYKDAMFVFGGDNGKNMLNDLIRFGVKDKSWGRACATGTPPAPRYHHSAVVAGSSMFVFGGYTGDIHSNSNLTNKNDLFEYKFLSAMWVEWKTPGKQPVPRSAHGAAVYDNKMWIYAGYDGNARLNDMWTLNLTGENHQWEEVEQQGDRPPTCCNFPVAVARDAMYVFSGQSGLQITNSLFEFHFKTRTWRHISNEPVLRGATSAPPSRRYGHTMVHHDRFLYVFGGSADSTLPNDLHCYDLDSQVWSVIQAELNSDMPSGRVFHASAVIGDAMYIFGGTVDNSVRRGDTYRFQFSSYPKCTLRDDFSKFFHEKQFCDIQFLVGVEEVRILAHIAFVAARSKYLRNKILSAREALQQQMEKLYGVGQIDGLAFNTGVGADRAPMLEVRLAHASPEAFEIILNYIYTDRIDLKDSYSKNIIILITDIYQLAGLFTMPRLAHGCIQYLDYKINKLNVLEALYNADKHNIKIIKDHCMQFIIKEENFTEVVMSNEFSDLDKPLLVEIIRKRLHPCKLVMETTYEPNIGTTLEHDMSTFLETTGKEFCDISLMLEDNVIQAHKSVLSARCTYFQGMFRSFTPPDNSVNIQIGEISPSLESFDSLLRYIYYGETKMPPQDALYLFQAPCFYGLSNNRLHAFCKYSLEHNITYENVLETLEASDITKIYDIKEYALKLIVKDFSKVARLPKISCLSRELLLEIIRAVADSQGEFLTRININTDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00479535;
- 90% Identity
- iTF_01570295;
- 80% Identity
- -