Htri012287.1
Basic Information
- Insect
- Hirtodrosophila trivittata
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_035045065.1
- Location
- JAWNNK010000870.1:86261-88247[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.1e-78 5.6e-74 249.4 16.4 89 299 10 210 4 211 0.98 2 2 0.6 6.6e+03 -3.6 0.2 134 137 237 240 217 259 0.49
Sequence Information
- Coding Sequence
- ATGGTGGGAGCTATCCAAGTTTCTGATAAAGCAATGATGTCGgAAGCCGAAGAACGTTTTCGAAAAGCTATGATAACAAATGCCCAGCTGGATAACGACCGCTCATCTCAAATCTATGAAGTCAAGTTACTCAAGGATAAAAGTGAGACGATGCAGGAGTCCTTTGCCCAATTACAGCGCGAGCTTAAAAACAAACTCCGCGAGTATAATGTCCTAAAAAGAAGCTTGGATCGCACAACAATGGAATTGAACCTTGTTCAAGGTCAGCTAATAGAGCGTGATGCACTGATTGCGGAACATGGTCTTGTTATTGTAGCTATTGAGAATACTGATGGTAGCGACGCCAAGCGTGCTTTGGTTAGTATTGAAAACGCCAATTTATTGGCAACCGTGCAGGGTTCGCTTGaTGTACGACTCAAAAAAATTACCGAGGAAAAACAGCAGCTTCTTGTTGAAGTCCAAAAGTTGCATGAAGGGTTAGACGCGTATAAAAAGGAAGGAATGATAGGACACGGCAATTTGCTAAACGGCTCCTTAAGCTGCGACGATGATTTTGAGGTTCAAAGAGAAGCAAATAAGACCATATCAGATTATAAATACAAGCTTCAAAAGGCTGAACAGGAAATCGCTAATCTTCAGGCAAGTCTAGCACGTTCAGAGACACAAGTAGTTCGATATAAAAGCACGGCAGAAGCAGCTgaaaaagcagaagcagagctAAAACTCGAACGGCGTAAGCTGCAACGTGAGTTGCTATTCGATGTGAAATCCACAATGAATATGACCACCAACTTGTTCTAA
- Protein Sequence
- MVGAIQVSDKAMMSEAEERFRKAMITNAQLDNDRSSQIYEVKLLKDKSETMQESFAQLQRELKNKLREYNVLKRSLDRTTMELNLVQGQLIERDALIAEHGLVIVAIENTDGSDAKRALVSIENANLLATVQGSLDVRLKKITEEKQQLLVEVQKLHEGLDAYKKEGMIGHGNLLNGSLSCDDDFEVQREANKTISDYKYKLQKAEQEIANLQASLARSETQVVRYKSTAEAAEKAEAELKLERRKLQRELLFDVKSTMNMTTNLF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00802834;
- 90% Identity
- -
- 80% Identity
- -