Htri001168.1
Basic Information
- Insect
- Hirtodrosophila trivittata
- Gene Symbol
- bab2
- Assembly
- GCA_035045065.1
- Location
- JAWNNK010000066.1:514032-516547[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.1e-17 3.8e-14 52.4 0.0 1 43 92 135 92 137 0.95
Sequence Information
- Coding Sequence
- aTGCCCTGGCGAGTCGAACTGCACCTGAACCTAgacctggagctggagctggagctggagctggacctCGACCTGGGCCTAGCTATGGGTCTGgcCAAACTGATTGAGACCGGCGGACACGGCTGGATGGGTGCTCCGGCAACAGGCACATCTGTGGCGGCAGACAGTTACCAGTACCAATTGCAGTCCATGTGGCAGAAGTGCTGGAACACCAACCAACAGAATCTGGTGCAACAGCTGCGGTTCCGCGAGCGCGGACCCCTCAAGTCCTGGCGCCCGGAAGCCATGGCCGAGGCCATATTCAGTGTCCTCAAGGAgggtctctccctctcccagGCCGCTCGCAAGTTTGACATACCCTACCCGACGTTTGTGCTCTACGCGAATCGGGTGCACAACATGCTGGGACCCTCTCTCGATGGCGGCACTGATCCGCGACCCAAGGCACGTGGTCGTCCGCAGCGCATCCTGCTCGGCATGTGGCCGGAGGAGCTCATCCGCAGTGTCATCAAGGCCGTTGTCTTCCGTGACTATCGCGAGATCAAGGAGGACATCAGTGCCCACCAGTACGCCAATGGACAGGCGCATGGCGGTCACTATGGTTCAGGTAACTCCGCAGCAGCGGCCAACGGTTACCACAGCGCCGTCAAGATGGCCGCTCAGAGCGCCGCCCTGGCTCCACCCGATGCAGGCAACCCGCTCAGCACCATGACAGAGACGCTGCGCCGTCAGATACTctcccagcagcagcagcaacagtcgcctCACATCCAGTCCATGAACATGTACAAGTCGCCAGCCTACTTGCAGCGCTCGGAGATTGAGGATCAGGTCTCGGCTGCTGCGGCGGTGGCTGCGGCCAAGCATCAGCAGAGCGAGCGACGCGGCTCCGAGAACTTGCCGGACTTGAGCGCTCTGGGATTGATGGGTCTGCCCGGGCTGAATGTGATGCCCACCCAGCAGTCATCGCATCAGCGCGGCTCCGGTGGCAACGGCGGTGGGCCAGGTGCTCCGATGCATCCCAGTGCCGCCAGCTATGCCCGTGAGCTGTCCCGCGAGCGGGAGCGCGAGCGCGAGATGACGCGGGATCGGGAGCTGAAGGAGGCGATGCACGCCCGCCAGTATGGCAACCAGTCGCGTGGCTCGAATACGTCGGCGGGCAGCAAGTCGGTGGCAGCGCATGGTGCCTCCTCAAGCCGCCCAGGCGCCGCCTCCCCCTACTCCTCGCACTACGCCAAGCACGCCAAGGAACATCCCAGCTATGCGTACAACAAACGCTTCCTAGAGAGTCTACCCGCAGGCATTGACTTCGAGGCCATTGCCAATGGGCTGCTGCAGAAGTCGGTGAACAAGAGTCCCCGCTTCGAGGACTTCTTTCCGGGGCAGGACATGAGCGAGCTGTTCGCCAGTCCCGATGCCGGAGCCAGtgcagccgccgcagcagccgccgctgccgctgcctatGCCCCAGCCGCAGTGCGGGAGTCGCCGCTGATGAAGATcaagctggagcagcagcaggccaCAGAGCTGCCGCACGAGGATTGA
- Protein Sequence
- MPWRVELHLNLDLELELELELDLDLGLAMGLAKLIETGGHGWMGAPATGTSVAADSYQYQLQSMWQKCWNTNQQNLVQQLRFRERGPLKSWRPEAMAEAIFSVLKEGLSLSQAARKFDIPYPTFVLYANRVHNMLGPSLDGGTDPRPKARGRPQRILLGMWPEELIRSVIKAVVFRDYREIKEDISAHQYANGQAHGGHYGSGNSAAAANGYHSAVKMAAQSAALAPPDAGNPLSTMTETLRRQILSQQQQQQSPHIQSMNMYKSPAYLQRSEIEDQVSAAAAVAAAKHQQSERRGSENLPDLSALGLMGLPGLNVMPTQQSSHQRGSGGNGGGPGAPMHPSAASYARELSREREREREMTRDRELKEAMHARQYGNQSRGSNTSAGSKSVAAHGASSSRPGAASPYSSHYAKHAKEHPSYAYNKRFLESLPAGIDFEAIANGLLQKSVNKSPRFEDFFPGQDMSELFASPDAGASAAAAAAAAAAAYAPAAVRESPLMKIKLEQQQATELPHED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01327085;
- 90% Identity
- iTF_00805108;
- 80% Identity
- -