Basic Information

Insect: Hipparchia semele
Gene Symbol: -
Assembly: GCA_933228835.1
Location: CAKOGE010000006.1:1320608-1328659[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 4.4 2.3e+02 2.9 1.0 1 23 54 77 54 77 0.94

2 18 0.017 0.87 10.5 1.5 1 23 84 107 84 107 0.97

3 18 3.5 1.8e+02 3.2 4.2 1 23 180 202 180 202 0.97

4 18 0.0022 0.12 13.2 1.0 2 23 208 229 207 229 0.97

5 18 0.11 5.7 7.9 3.8 2 22 500 520 499 520 0.95

6 18 0.17 8.7 7.4 0.4 2 23 774 795 773 795 0.96

7 18 0.63 33 5.5 0.2 2 23 877 898 876 898 0.95

8 18 0.28 15 6.6 1.4 1 23 906 928 906 928 0.95

9 18 0.2 11 7.1 3.2 1 23 963 985 963 985 0.95

10 18 0.00064 0.034 14.9 5.4 1 23 993 1015 993 1015 0.99

11 18 0.069 3.7 8.5 0.3 1 23 1100 1122 1100 1122 0.96

12 18 0.36 19 6.3 0.1 2 23 1206 1227 1205 1227 0.97

13 18 0.0056 0.29 12.0 0.5 1 23 1295 1317 1295 1317 0.93

14 18 0.019 0.99 10.3 1.1 1 23 1323 1345 1323 1345 0.96

15 18 0.0088 0.46 11.4 2.6 1 23 1435 1457 1435 1457 0.97

16 18 0.00022 0.012 16.4 1.4 1 23 1463 1485 1463 1485 0.99

17 18 2.5 1.3e+02 3.6 1.4 1 23 1578 1600 1578 1600 0.94

18 18 0.0033 0.18 12.7 3.8 1 23 1611 1633 1611 1633 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	4.4	2.3e+02	2.9	1.0	1	23	54	77	54	77	0.94
2	18	0.017	0.87	10.5	1.5	1	23	84	107	84	107	0.97
3	18	3.5	1.8e+02	3.2	4.2	1	23	180	202	180	202	0.97
4	18	0.0022	0.12	13.2	1.0	2	23	208	229	207	229	0.97
5	18	0.11	5.7	7.9	3.8	2	22	500	520	499	520	0.95
6	18	0.17	8.7	7.4	0.4	2	23	774	795	773	795	0.96
7	18	0.63	33	5.5	0.2	2	23	877	898	876	898	0.95
8	18	0.28	15	6.6	1.4	1	23	906	928	906	928	0.95
9	18	0.2	11	7.1	3.2	1	23	963	985	963	985	0.95
10	18	0.00064	0.034	14.9	5.4	1	23	993	1015	993	1015	0.99
11	18	0.069	3.7	8.5	0.3	1	23	1100	1122	1100	1122	0.96
12	18	0.36	19	6.3	0.1	2	23	1206	1227	1205	1227	0.97
13	18	0.0056	0.29	12.0	0.5	1	23	1295	1317	1295	1317	0.93
14	18	0.019	0.99	10.3	1.1	1	23	1323	1345	1323	1345	0.96
15	18	0.0088	0.46	11.4	2.6	1	23	1435	1457	1435	1457	0.97
16	18	0.00022	0.012	16.4	1.4	1	23	1463	1485	1463	1485	0.99
17	18	2.5	1.3e+02	3.6	1.4	1	23	1578	1600	1578	1600	0.94
18	18	0.0033	0.18	12.7	3.8	1	23	1611	1633	1611	1633	0.98

Sequence Information

Coding Sequence: ATGCTACAACAGATGTCCTCGCCGCAGAGCGCGCAACTCGGCGAGGTCGCGACTCTCGTGCGCCCCCTCGAAGGCCGCCTGTGCGGCGACGCATCGTCGGAGGCCTCCTCGGACGCCGCGGAAGATTTTGAATTGCCGCAGTGCAAGATAAAGCGGAACTACAACTGCACGAAGTGCACGTTTTACACGCAGAACCCGCGCGCTTATCTCGTGCACACGCGCGACGTCCACTTCGAAAGACTCAAGATTTATGACTGCCCCTATTGTATTTATGCTTCCCGGCATCAACAAAAACTCACGAGGCATATAAAGATGGTTCACGAATCTTCTGCCAAGGAGACGGGAACGATACCACCGCCTCCTCAAAACTCGGAGCCCGTAGAGAGGATGGAAGAGCTGCTCGAGGAAGTGGAGGAGTGCGACGACGTGCAGATAGACGTCGAGGACTGCGACGAAGAGGCACTCGAGCGCACCTTCGAGAGCGAGTCCGCCAACGCCGACGCCGCGCCCGACCAGCCGACAGACAGAAGCAATTTCTTTCCCTGCAGCAAATGCAACTACGTCACGCACATAAGATCGAGATACACGAAGCACGTTAAATATCATTCGATGCCAATGATAAAGTGCACCATGTGCGATTTTCGCACGCCTTACAAGTGGAACCTGGATCGACATATGAAAAACCACGGCGGTAACGGGAGTTTTCACTGCACGATGTGTAACTTTACGGCAGACATAAGACAGAGTTTGACAGTGCACGAAATGAATCACCACTCGCCGCCCGTTGGCCAAACGGGTTCCAACAGACGTCGCAACCGGGTGGGCGCCAGTGACTTGCCCACTGGAGTCGATATGACGGACGCGAGTGCTCTCATCTTGAAAGAAGAGGAAGGGAGTGGAGACTCGCATTCTTCGCATTCTGCATCGgaaATGGGACTTCAGTATATGGACAAAGAAGTTATAAGTTGCAACAGCGACTCTAACGAAGCCTCCACATCTGAAACATCCAAAAACGATAATATACAATTGTCTAAAGATGCTGAAGGCGAAGTGGCCCATACATCAGATGAAGGAAAACACCAAAAACAAAGTAGAAAAGCACCAAGACCTATACCACAACTTATACCCTTAAATGCTTCAACTCCAAATCAAACCAAGCCTCTTCCCGGTGAACCACCAGCTAAGAAGTTTAAAGAGTCATCAACAGCACAAACGGCGGAGATCCAAAAGATGGAAACTTTACCTGTAGACATAACCTTAACTCCAATAAATAATCTGGTTGCGAAAGATACGTCCAGTCGAAAAAAGAATGAATCGTTTTTTGACCGCCTGAAGGAGAGATTACTAACTGAAACCGGCGAAAAAGGTACTCTCGTATGTAAAAATTGTGGATTTGAAAGTAAATGTTTATCTGAACATTCGGTTCACGAGAAGAATTGCTCAACGCAGACTAATCGAATACCAGCAAACGCACTCCATTCCAGTTTGGGGTCGACACGATGTCAACACTGTAGACAACGATGTAAATCAAGCGCAGATTTATATCTACATATGCAGACGTGTAGGAAAAAAGACGGTTCCTTTGAAAACACTTTAGAAGGACATAACAATGATAGCACTGGAACTGTATTGAGTAATCAAGAAAAGGATGCCGAACCACATCCTATGGAAAATGTTGTTTTTGTTTGGAACAACATCAATCAAAATAGTAACAAGTTTGAGACTCCATTAGATATAAGTATAAATGACGATTCCACTCTACCAGAGCCAATCAGAGGCTTTGAGCTAGATATTGTTGACGATAATGAAACAATGAATTTATCGCCCAGCCAAGCGGTGGGTAAAAAAGTGTTTAAATGTCCGCATTGTTTGTTTTGGGCCGCCACTGCTTCAAGATTCCACGTACATATAGTTGGGCATCTCAACAAGAAGCCATTTGAATGCTCTTTGTGCAAGTACAAATCAAACTGGCGATGGGACATAACGAaacatattaaattaaaatcagcTCGAGATCCTGAGCACACAGATGCAAAAGTACTCATGACAGATGAGACGGGAAGGCGAAATTACAGTAAATACAACAAATTTTTAGCGATGCCAGTTATGAACGAAAACGGTGAAAACGAGTTTCATTATATCGACCAAAATACAACCGCTGATACAGCGTTAGACGAGGAGCCATACAATGACACTAACGAGAGTGGCAATATACCTCTGGAGATGCAACCCCTTAATCTACATACTCATTCTACTGACCACAAGTTTGACATAGATAATAGATTGCAAGATGCTAAAAAACCTAAAAAGACAATGTGGAAatgtaaaaaatgtaattacaaggattcctCAAAAGAAGCTTTAATAGAACATGTCCGGGAACATTCTAAACCAGAAGATTTCGAAGATGGTAAAGCTGGAAACAATGCAAATAAGAAACCAGAAAATATGCCTGATCCTGCTGACTTGGCCTATCGATGTGGCCATTGCAACCAACTCTCTAATTGGAAACATGTTATACAGAGGCATTGCCGCTTGAAACATGACGGAATCATAAAAGTTATCACAACTGTGAAACCAAAAGCTGATAATATGCCCACAACATCGACAAGTGAATTTGGCGGCGATATGTGCACGAAGTGTCCCTTTAAGACAATTGATAAGAACGTACTGGCAGCACATTTACTGCAACATCAACCTTCCGCCCAGTCAATATTCAAGTGCTACTTTTGCCCTTTTTTCGTCAAGGATGAGCATGAATTAATACAGCATCTTGTTTTACATGGCATTTCGGATCCAGAAGAATATATTTCAAAAGCTATGGGATGCAAATCACCTCTACCCGAAAACGGAGCGAATCCACTAAATCCGTGTACTACAAAACGACATAGATGTACGGAATGTCCCTATGAAACTAATAGTAAGTCTCAGTATATGTATCATGAGCAGTTCCATCGACTACCCGCAGACACTCCATACAAATGTCAAGAATGTAACTATAGTGTATCCAAGAGGCATTTGTTACATCAACATATGAGAGTTCACGGTATTATTGCTAAGAAGAGTGAAATGGAGGCCGAGTTGGAAGCTATGTCATCGAATTCGAATCAGGCTGATGAGAAATCTGAATGTTCAATTAATCTTGACGAAATACCCTTCGTATGGGTATCAGCCAGAAATGAATTTCACAAAATGTACAAATGCCGTTATTGTTCTTATGTTAATTCTCAAAAGTGTAAAATACCTAATCATGAAAAAATTCACTGTAACATATTTGAGAACAGTGACATAACAATTTATAAGTGCCTCGAGTGTAAATATACTAGTGATAATAAAGGAGGATTAGCGGAACATTCGAAAGCACACGCTGAAATATACGGTCGCATTTACTGTCCTGTAGAAATGGACGTGCCTGACGAAGAACAGATAGCGAAATTACGAAAAGTAATTGATAGAGAGAAACTAAACGTTGCAGAATTACCAAGAGAGGAAGAGCATTTAGGTGAAAACAAGGAAATCAAAACTTTGTACTTTTGCCAAAAATGTCCAGCTCGATTTTTCGCCGACAATGAATTAAAAGTGCATGATAAATTTCATGACTTaacattttcaaataaatgcaaaagttgtGAGTTTTCTGTACCTCAAGATGATGATTTAAATGTTCATATATTCGTTCACACAGATGAATACAATACGAAGACGAAAATGCTGAAATTCATTCATAAAACTCATTGGGCTTTCAAAGAACCTAAATTACAGCTTGTCCACTGCCCTCTTACATCCGAGATCACGTGGATTGTAGCAAGTCCAGGTAAAAATTTTGACATAAATGAAAATACCAATAAAAAATCTGCCGAAACAAAACATACGCCAAAACAATACTTGTGTAAGGAATGCCCagcaaaattctttaaaaattctGCACTAACATATCACATGGGATTACACGGAGGAGATGGCGATCACAAATGTAAGAAATGTAGTTATGCTGTTAAAAATATCGGAAACCTGGCCAAACACGAACTATTACATGAAAATGAGACTAAATTAAATACATGCGATTATGAATCTGGAGATGACATGGACTTCAAAAACATTCCCTTATCAGGCACGGATCTATTTCAAAGAAAGACAGAGGCTCAAAAAAGAGTTCTTACAGATAAAGATAAACTTGTGAAACCAAACGATCATTTTCCACCTGTACTCCAAGCTGACCCACAATTCGGATACTTAATGCATGGAAATCCAGAGTTCATATAtcctacttatttaaaaaatggaCGTCAGAAAGAAAAACGGTACAAGTGCCACAAGTGCCCATCAGCATTTGAAAAACGGGAACAGTATAAGATTCATTTATCATTACATGGTTCAAAACAAAGATATAAATGTGAACTATGTGACTATTCTGTAAAATATTACGCTAATTACGTTCAACATATGAGGAAACATCAAATGAATGATGAAGCACAAGCCGAGAGAAAAAAAGGAATCAACGGACTTGATGGACCCGAGTCTGAAAACATAGATCTAAAGCCAGATGATAGTGGGGATAATATAAAATTAGCAATTAAAACTATGCCAAAACGACCGGTTAAAAGTGATTTTCAACAATTTTCAATAAGTGATCAACAAACACTACGGTTGTTGCAACGCAGGCGTTCGCTGAATATTTCCGGGAAAGATGCAATTACGACTGACCCGTCGCCTACAAAAGATCGAAGGCAGCATATGTGTTTACTTTGCCCCTACATAAACCAGCGCCAAGATGCACTCAGTAATCATTATAGGAGACATGATGAAACTGACTCCCTCAGCAGTGGTAACCATAAATGTAATTATTGCGATTTAGTTGTTATACAATCTCATTTTCTACGTGATCATCTAAAAACTCACTTTAATTACCAAAAGCATCATAACCCTGAATGTTTTGTGGCTAACGAAAATGTAAGTTTTACAATTACcaaattggatgaaaatgatttGTCAAATGATCTCAAATTAGATACCCTGAATAAAAAcagattttcaaataaaaagaaaatattcgtaaaaatTAAAACGGGGGAACTTTGTGTAGATTAG
Protein Sequence: MLQQMSSPQSAQLGEVATLVRPLEGRLCGDASSEASSDAAEDFELPQCKIKRNYNCTKCTFYTQNPRAYLVHTRDVHFERLKIYDCPYCIYASRHQQKLTRHIKMVHESSAKETGTIPPPPQNSEPVERMEELLEEVEECDDVQIDVEDCDEEALERTFESESANADAAPDQPTDRSNFFPCSKCNYVTHIRSRYTKHVKYHSMPMIKCTMCDFRTPYKWNLDRHMKNHGGNGSFHCTMCNFTADIRQSLTVHEMNHHSPPVGQTGSNRRRNRVGASDLPTGVDMTDASALILKEEEGSGDSHSSHSASEMGLQYMDKEVISCNSDSNEASTSETSKNDNIQLSKDAEGEVAHTSDEGKHQKQSRKAPRPIPQLIPLNASTPNQTKPLPGEPPAKKFKESSTAQTAEIQKMETLPVDITLTPINNLVAKDTSSRKKNESFFDRLKERLLTETGEKGTLVCKNCGFESKCLSEHSVHEKNCSTQTNRIPANALHSSLGSTRCQHCRQRCKSSADLYLHMQTCRKKDGSFENTLEGHNNDSTGTVLSNQEKDAEPHPMENVVFVWNNINQNSNKFETPLDISINDDSTLPEPIRGFELDIVDDNETMNLSPSQAVGKKVFKCPHCLFWAATASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHTDAKVLMTDETGRRNYSKYNKFLAMPVMNENGENEFHYIDQNTTADTALDEEPYNDTNESGNIPLEMQPLNLHTHSTDHKFDIDNRLQDAKKPKKTMWKCKKCNYKDSSKEALIEHVREHSKPEDFEDGKAGNNANKKPENMPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGIIKVITTVKPKADNMPTTSTSEFGGDMCTKCPFKTIDKNVLAAHLLQHQPSAQSIFKCYFCPFFVKDEHELIQHLVLHGISDPEEYISKAMGCKSPLPENGANPLNPCTTKRHRCTECPYETNSKSQYMYHEQFHRLPADTPYKCQECNYSVSKRHLLHQHMRVHGIIAKKSEMEAELEAMSSNSNQADEKSECSINLDEIPFVWVSARNEFHKMYKCRYCSYVNSQKCKIPNHEKIHCNIFENSDITIYKCLECKYTSDNKGGLAEHSKAHAEIYGRIYCPVEMDVPDEEQIAKLRKVIDREKLNVAELPREEEHLGENKEIKTLYFCQKCPARFFADNELKVHDKFHDLTFSNKCKSCEFSVPQDDDLNVHIFVHTDEYNTKTKMLKFIHKTHWAFKEPKLQLVHCPLTSEITWIVASPGKNFDINENTNKKSAETKHTPKQYLCKECPAKFFKNSALTYHMGLHGGDGDHKCKKCSYAVKNIGNLAKHELLHENETKLNTCDYESGDDMDFKNIPLSGTDLFQRKTEAQKRVLTDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKGINGLDGPESENIDLKPDDSGDNIKLAIKTMPKRPVKSDFQQFSISDQQTLRLLQRRRSLNISGKDAITTDPSPTKDRRQHMCLLCPYINQRQDALSNHYRRHDETDSLSSGNHKCNYCDLVVIQSHFLRDHLKTHFNYQKHHNPECFVANENVSFTITKLDENDLSNDLKLDTLNKNRFSNKKKIFVKIKTGELCVD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00955235; iTF_00954039; iTF_01092645; iTF_00354667; iTF_00353646;
90% Identity: iTF_01092645;
80% Identity: -