Basic Information

Insect: Coenonympha glycerion
Gene Symbol: -
Assembly: GCA_963855885.1
Location: OY979629.1:13268623-13273065[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.62 38 5.6 4.7 2 22 183 203 182 203 0.95

2 15 0.14 8.7 7.7 0.4 2 23 457 478 456 478 0.96

3 15 0.069 4.2 8.6 0.1 2 23 560 581 559 581 0.95

4 15 0.24 15 6.9 1.4 1 23 589 611 589 611 0.95

5 15 0.14 8.4 7.7 3.4 1 23 646 668 646 668 0.95

6 15 0.00055 0.033 15.3 5.4 1 23 676 698 676 698 0.99

7 15 0.42 26 6.2 2.8 1 23 783 805 783 805 0.97

8 15 0.79 49 5.3 1.0 1 19 861 879 861 883 0.90

9 15 0.24 15 6.9 0.6 2 23 890 911 889 911 0.96

10 15 0.0028 0.17 13.0 0.5 1 23 979 1001 979 1001 0.96

11 15 0.016 0.98 10.6 1.1 1 23 1007 1029 1007 1029 0.96

12 15 0.0075 0.46 11.7 2.6 1 23 1119 1141 1119 1141 0.97

13 15 0.00019 0.011 16.7 1.4 1 23 1147 1169 1147 1169 0.99

14 15 0.65 40 5.6 0.9 1 23 1262 1284 1262 1284 0.96

15 15 0.0014 0.085 14.0 3.4 1 23 1295 1317 1295 1317 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.62	38	5.6	4.7	2	22	183	203	182	203	0.95
2	15	0.14	8.7	7.7	0.4	2	23	457	478	456	478	0.96
3	15	0.069	4.2	8.6	0.1	2	23	560	581	559	581	0.95
4	15	0.24	15	6.9	1.4	1	23	589	611	589	611	0.95
5	15	0.14	8.4	7.7	3.4	1	23	646	668	646	668	0.95
6	15	0.00055	0.033	15.3	5.4	1	23	676	698	676	698	0.99
7	15	0.42	26	6.2	2.8	1	23	783	805	783	805	0.97
8	15	0.79	49	5.3	1.0	1	19	861	879	861	883	0.90
9	15	0.24	15	6.9	0.6	2	23	890	911	889	911	0.96
10	15	0.0028	0.17	13.0	0.5	1	23	979	1001	979	1001	0.96
11	15	0.016	0.98	10.6	1.1	1	23	1007	1029	1007	1029	0.96
12	15	0.0075	0.46	11.7	2.6	1	23	1119	1141	1119	1141	0.97
13	15	0.00019	0.011	16.7	1.4	1	23	1147	1169	1147	1169	0.99
14	15	0.65	40	5.6	0.9	1	23	1262	1284	1262	1284	0.96
15	15	0.0014	0.085	14.0	3.4	1	23	1295	1317	1295	1317	0.98

Sequence Information

Coding Sequence: ATGGGACATCAGTTCGTGGATAAGGAAGTTTTAAGTTGTAACAGTGATTCTAACGAAGCTTCGTCAGCGGAAAATACTAAAACGGATAATATGCAACTATCAAAACAATCGGAGGGAGATATGGCCCCTACCTCTAAGGAAACTAAGCAAAGCAGAAAAGCTCCAAGACCTATACCGCAACTTATACCCTTAAATGCTTCAACTCCAAATCAAGCGAAGCCTCTCCCCGGTGAACCACCAGCTAAGAAGATGAAAGGGTCGCCGACAGAGACGCAGAAAACGGAACCTTTACCTATAGACATAACTCTAACTCCGGTGAATAATGCAGTCGCAAAAGACACATCCACTCGGAAGAAGAATGAATCCTTTTTCGACCGCCTCAAGGAGAGACTACTAACTGAAACAGGGGAAGAAGGGACCCTCGTGTGCAAAAGTTGTGGATTCGTTAGTAAATGTTTGTCTGAACATTCTGTCCACGAGAAGAACTGCACAACGCAGTCGAATCGAGTACCAGCGAACGCGCTACATTCCAGTTTGGGGTCGACGCGGTGTCAGCACTGCAGACATCGATGTAAATCAAGCGCTGATTTATACCTGCATATACAGACGTGCAAAAAGAAGGACAGTGCTATAGAAAACAATGTAGAGGCACATAATAATGATAGTACGGGGACTGTATTGAGTAATCAAGAAAAAGATGCGGAGCCACATCCGATGGAAAATGTGGTTTTCGTTTGGAACGACATAAGTCATAATAGTAATAAGTTTGAAACTCCATTAGATATAAGTATTAATGACGATTCTACTCAACCCGAGCAGGTTAGAGGCTTTGAGCTAGATGTTGTCGACGATAATGAGACAATGAACTTGTCACCCAGCCAAGCGGTGGGCAAGAAAGTTTTTAAATGTCCGCATTGTTTATTTTGGGCAGCCACTGCTTCAAGATTTCACGTGCATATCGTTGGGCATCTCAACAAGAAACCTTTTGAATGTTCTCTGTGCAAGTATAAATCAAACTGGCGGTGGGACATAACTAAACATATTAAATTGAAGTCTGCTAGAGATCCTGAACACGCGGATGCAAAAGTTCTCATGACGGACGAAACGGGCAGAAGGAATtacagtaaatataataaatttttagCTATGCCAGTTATGAACGAAAATGGTGAAAATGAGTTTCATTACATTGACCAAAATGCCGCTGCTGATACAGCTTTAGAAGAGGAGTCCTTTAATGATATGAACGAGAGTTCCAACATACCTATGGATATGCAACCGCTTAATCTGCACAATAATTCGAATGAACAAAAGTTTGATATGGATGGTAGACTACACGACGCTAAAAAACCTAAGAAGACAATGTGGAAGTGCAAAAAATGTAATTACAAGGATTCTTCTAAAGAAGCATTAATAGAACATGTCCGGGAGCATTCCAAACCTGAGGATTCCTCCGAAGAGGCGAAGGCAGGAAACAGTGCGAACAAAAAACCAGAAAACATGCCCGACCCTGCGGATTTGGCCTACCGATGCGGGCATTGCAACCAACTCTCCAACTGGAAACATGTTATACAGAGACATTGCCGTTTGAAACATGACGgaataataaaagttataacGACTGTGAAGCCAAAAGTAGAACTGCCGACTACATCGTCAAATGAATTTGGCACCGACATGTGCACGAAGTGTCCCTTCAGAGCAAGCGACAAGACCGCACTAGCAGCACATCTACTGCAACATCAACCTTCCGCGCAGTCAATattcaaatgttatttttgCCCCTTTTTCGTCAAAGATGAACACGAACTGATACAACATCTTGTTTTACACGGCATTACTGATCCAGAAGATTATATATCGAAAGCTATGGGATGTAAATCGCCTTTACCAGAACACGGGGCTAATGCAGTAAATCCTCTCGCTACGAAACGTCACAAATGCACTGAATGCCCCTATGAAACCAACAGCAAGTCTCAGTATATGTATCACGAGCAGTTCCATCGGCTCCCAGCAGACACTCCGTACAAGTGCCAAGAATGTAATTATAGCGTATCCAAAAGGCATTTGCTACATCAGCACATGAGAGTTCATGGAATTATTGCAAAGAAAAGTGAAATGGAGGCGGAATTGGAAGCGATGTCTTCGAATTCTAATCAGACTGATGAAAAAGCTGAATGCTCAATAAATCTTGATGAAATACCCTTCGTGTGGGTTTCAGCCAAGAATGAGTTTCACAAAATGTATAAATGCCGTTACTGTTCTTACGTCAATtctcaaaaatgtaaaatacctAATCATGAGAAAATTCACTGCATCATATTTGAGAATAGCGATATAACAATTTATAAATGTTTGGAGTGTAAATTTACGTGTGATAACAAGGGCAGATTAGCAGAACATTCCAAATTGCACGGGGAAATATACGGTCGTATTTATTGCCCCGTAGAAATGGACGTACCTGACGACGAGCAAATAGCGAAGTTACGCAAAGTAGTAGAAACAGAGAAACTCAACGCGCCGGAAGAGTCACCAAAGGAAGAAGAGAATCAGCCTGAAAACAATGAaacaaaaactttgtacttttgcCAAAAATGCCCAGCAAGATTTTTCGCCGAAAGCGAATTAAAAGTTCACGACAAGTATCACGACTTaacattttcaaataaatgCAAGAGCTGCGAGTTTTCTGTACCTCAATATGACGATTTGAATACTCATACATTCGTTCACACAGATGAATACAATACGAAAACGAAAATGCTGAAATTTATTCATAAATCTCATTGGGCTTTCAAAGAACCAAAACTGCAGCTCGTTCATTGCTCGCTCACATCCGAGATCACGTGGATCGTAGCAGAACCCGGAAAAAACTTCGACACAAACGAGAACAGCAATAAAAAATACTCAGAATCAAAACAGACCCCAAAACAATACTCGTGTAAAGAATGTCCAGCAAAATTCTTCAAAAGTTCCGCACTGAGTTATCACATGGGTTTGCACGGAGGAGACGGCGATCACAAATGTAAGAAATGTAGTTATGCTGTAAAAAATATTGGGAACCTGGCCAAGCACGAGCTGCTGCATGAGAATGAAAGTAAATTATCGACAGCAGATTATGAATCTGGAGATGACATGGATTTCAAAAACATTCCTTTATCGGGCACAGATTTATTTCAGAGAAAGACTGAGGCTCAAAAAAGAGTGCTCACCGATAAAGATAAGCTCGTAAAACCGAACGATCATTTTCCACCCGTACTGCAAGCTGACCCCCAGTTCGGCTATTTAATGCATGGCAATCCAGAGTTCATATATCCCACTTACCTAAAAAACGGCCGGCAAAAAGAAAAACGGTACAAATGCCACAAGTGTCCATCAGCATTTGAAAAACGGGAACAATACAAGATACATCTATCTTTACACGGATCGAAACAAAGATACAAATGTGAACTTTGTGACTATTCAGTAAAATATTACGCGAATTATGTGCAACATATGAGAAAACATCAAATGAACGACGAAGCACAAGCCGAAAGGAGAAAAGGAAGTAACGGCGTCGAGGAACCCGAGTCTGAAAATCTAGACGTAAAGGCCGATGCCGGTaaagataatattaaattagCAATTAAAACTATGCCAAAAAGACCGGTCAAGAGTGATTTCCAGCAATTCTCAATAAGCGATCAGCAAACGCTTCGGTTGTTACAACGCAAGCGGTCCTTGAATATGTGTGGGAAAGATGCGAGCGCGAATGAACCGTCACCTACAAAGGAGCGCAAGCAGCACATGTGTTTGCTGTGTCCATACGTCAACCAACGGCAAGACGCTCTAGTTAATCACTACAGAAGACACGACGAGACCGACTGTCTCAGCAGTGGAAACCATAAATGTAATTACTGCGATTTAGTCGTCATACAATCACATTTTCTACGTGATCACATCAAAACTCATTTCAACTACCAGAAGCAACATAGCCCGGAATGTTTCGTAGCCAGTGAAAACGTAAGTTTTACAATCACCAAATTGGATGAAAATGATGTCTCAAGCGATCTCAAATTAGACACCACATATAAAAAATGTTCatcaaataaaaagaaaatatttgtaGATATAAAAACAGGAGAACTTGCAGTAAAATAA
Protein Sequence: MGHQFVDKEVLSCNSDSNEASSAENTKTDNMQLSKQSEGDMAPTSKETKQSRKAPRPIPQLIPLNASTPNQAKPLPGEPPAKKMKGSPTETQKTEPLPIDITLTPVNNAVAKDTSTRKKNESFFDRLKERLLTETGEEGTLVCKSCGFVSKCLSEHSVHEKNCTTQSNRVPANALHSSLGSTRCQHCRHRCKSSADLYLHIQTCKKKDSAIENNVEAHNNDSTGTVLSNQEKDAEPHPMENVVFVWNDISHNSNKFETPLDISINDDSTQPEQVRGFELDVVDDNETMNLSPSQAVGKKVFKCPHCLFWAATASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHADAKVLMTDETGRRNYSKYNKFLAMPVMNENGENEFHYIDQNAAADTALEEESFNDMNESSNIPMDMQPLNLHNNSNEQKFDMDGRLHDAKKPKKTMWKCKKCNYKDSSKEALIEHVREHSKPEDSSEEAKAGNSANKKPENMPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGIIKVITTVKPKVELPTTSSNEFGTDMCTKCPFRASDKTALAAHLLQHQPSAQSIFKCYFCPFFVKDEHELIQHLVLHGITDPEDYISKAMGCKSPLPEHGANAVNPLATKRHKCTECPYETNSKSQYMYHEQFHRLPADTPYKCQECNYSVSKRHLLHQHMRVHGIIAKKSEMEAELEAMSSNSNQTDEKAECSINLDEIPFVWVSAKNEFHKMYKCRYCSYVNSQKCKIPNHEKIHCIIFENSDITIYKCLECKFTCDNKGRLAEHSKLHGEIYGRIYCPVEMDVPDDEQIAKLRKVVETEKLNAPEESPKEEENQPENNETKTLYFCQKCPARFFAESELKVHDKYHDLTFSNKCKSCEFSVPQYDDLNTHTFVHTDEYNTKTKMLKFIHKSHWAFKEPKLQLVHCSLTSEITWIVAEPGKNFDTNENSNKKYSESKQTPKQYSCKECPAKFFKSSALSYHMGLHGGDGDHKCKKCSYAVKNIGNLAKHELLHENESKLSTADYESGDDMDFKNIPLSGTDLFQRKTEAQKRVLTDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERRKGSNGVEEPESENLDVKADAGKDNIKLAIKTMPKRPVKSDFQQFSISDQQTLRLLQRKRSLNMCGKDASANEPSPTKERKQHMCLLCPYVNQRQDALVNHYRRHDETDCLSSGNHKCNYCDLVVIQSHFLRDHIKTHFNYQKQHSPECFVASENVSFTITKLDENDVSSDLKLDTTYKKCSSNKKKIFVDIKTGELAVK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00802438;
90% Identity: iTF_00353646;
80% Identity: -