Mhyp000179.1
Basic Information
- Insect
- Maniola hyperantus
- Gene Symbol
- -
- Assembly
- GCA_902806685.1
- Location
- NC:5984720-6006132[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 3.4 1.3e+02 2.9 1.0 1 23 57 80 57 80 0.94 2 20 0.041 1.6 8.9 1.5 1 23 87 110 87 110 0.97 3 20 2.7 1e+02 3.2 4.2 1 23 186 208 186 208 0.97 4 20 0.0017 0.067 13.2 1.0 2 23 214 235 213 235 0.97 5 20 9.5 3.6e+02 1.5 3.1 1 23 241 263 241 264 0.94 6 20 0.35 14 6.0 5.3 2 22 506 526 505 526 0.95 7 20 0.13 4.9 7.3 0.4 2 23 780 801 779 801 0.96 8 20 0.51 20 5.4 0.5 2 23 883 904 882 904 0.95 9 20 0.22 8.4 6.6 1.4 1 23 912 934 912 934 0.95 10 20 0.16 6 7.1 3.2 1 23 969 991 969 991 0.95 11 20 0.00049 0.019 14.9 5.4 1 23 999 1021 999 1021 0.99 12 20 0.026 0.99 9.5 1.2 1 23 1106 1128 1106 1128 0.96 13 20 9.9 3.8e+02 1.4 0.9 1 19 1183 1201 1183 1205 0.87 14 20 4.1 1.6e+02 2.6 0.3 2 23 1212 1233 1211 1233 0.95 15 20 0.028 1.1 9.4 0.4 1 23 1301 1323 1301 1323 0.91 16 20 0.014 0.55 10.3 1.1 1 23 1329 1351 1329 1351 0.96 17 20 0.0068 0.26 11.4 2.6 1 23 1441 1463 1441 1463 0.97 18 20 0.00017 0.0065 16.4 1.4 1 23 1469 1491 1469 1491 0.99 19 20 2 76 3.6 1.4 1 23 1584 1606 1584 1606 0.94 20 20 0.0041 0.16 12.1 3.4 1 23 1617 1639 1617 1639 0.98
Sequence Information
- Coding Sequence
- ATGCGGAGTATGCTACAACAGATGTCCTCGCCGCAGAGCGCGCAACTCGGCGAGGTCGCGACTCTCGTGCGCCCGCTCGAAGGCCGCCTGTGCGGCGACGCATCTTCGGAGGCCTCCTCGGACGCCGCGGAAGATTTTGAATTGCCACAGTGCAAGATAAAGAGGAACTACAACTGCACCAAGTGTACGTTTTATACGCAAAACCCGCGCGCTTATCTCGTGCACACGCGTGACGTTCACTTTGAAAGACTCAAGATTTATGATTGCCCCTATTGTATTTATGCTTCCCGGCATCAACAGAAACTTACGAGGCACGTAAAGATGGTCCACGAATCTACCTCCGTTAAGGAGACGGGAACGTTACTACCGCCCACTTCGCAACCCTTGGAGCCGATAGAGAAGATGGAAGAGTTGCTCGAGGAAGTGGAGGAGTGCGACGATATGCAAATAGATGTGGAGGACTACAACGAAGAGGCACTCGAGCGCAACTTCGAGACCGAGTCCGCGAGCGCAAACGACGCAGCACCGGACCAGCCGACAGACAGGAGCAACTTCTTTCCCTGCAGCAAATGCAACTACGTCACCCATATAAGATCGAGATACACGAAGCACGTTAAATACCATTCGATGCCTATGATTAAGTGCACTATGTGTGATTTTCGCACGCCTTACAAGTGGAACTTGGATCGACATATGAAAAACCACGGTGGGAACGGGAGTTTTCACTGTACCATGTGCAACTTCACGGCAGATATCAGGCAGAGTTTGACAGTGCACGAAATGAATCACCACTCACCGCCCGTTGGCCAAACGGGTTCCAACCGGCGCCGCAACCGGGTGGGCGCCAGCGACTTGCCCGCTGGAGTCGACACGACGGACGCTAGCGCTCTCATTTTAATAGAGGAGGAAGGAAGTGGAGATTCACATTCGTCGCACTCTGCATCGGAAATGGGGCTTCAATACATGGACAAAGAAGTTATAAGCTGCAACAGCGATTCCAACGAAGCCTCTACATCGGAAACTCCAAAAAACGAAAATATGCAATTGTCTAAGGATCCAGAGGGCGAAGTAGCCCTTACATCAGATGAAGCCAAATCGCAAAAACAAAGTAGAAAAGCTCCAAGACCTATTCCACAACTTATACCCTTAAATGCTTCAACTCCTAATCAAACTAAGACTCTTCCCGGTGAACCCCCAGCTAAGAAGTTTAAAGAGTCATCGAGAATACAAACAGCAGACATACAAAAAATGGAAACTTTACCTATAGACATAACTTTAACTCCAGTAAATAATCTGGCTGCAAAAGATACGTCCATCCGGAAAAAGAATGAATCTTTTTTTGACCGCCTGAAGGAGAGATTACTTACTGAAACTGGGGGAGAAGGTACTCTTGTTTGTAAAAATTGCAGGTTTGAAAGTAAATGTTTATCTGAACATTCAGTTCATGAGAAGAATTGCACAACGCAGTCGAATCGGATACCAGCAAACGCCCTGCATTCAAGTTTAGGCTCGACACGATGCCAACATTGTAGACATCGATGTAAATCAAGCGCCGATTTATACCTGCATATGCAGACGTGTAGAAAAAAAGACAGTGCCTTTGAAAACACTTCAGAAGGACATAACAATGATAGCACTGGAACCGTATTGAGTAATCACGAAAAGGATGCGGAACCACATCCTATGGAAAATGTTGTTTTTGTTTGGAACGACATAAGTCATAATAGTAATAAGTTTGAAACTCCACTAGATATAAGTATTAATGACGATTCCACCCTACCGGAGCAGATCAGAGGCTTCGAGCTAGATATTGTTGACGATAATGAAACAATGAATTTATCGCCTAGCCAAGCGGTGggtaaaaaagtatttaaatgtCCGCATTGTTTGTTTTGGGCAGCCACTGCTTCAAGATTTCACGTACATATAGTTGGTCATCTCAACAAGAAGCCATTTGAATGTTCTTTGTGCAAGTACAAATCTAACTGGCGATGGGACATAACTAAACATATTAAATTAAAGTCAGCTCGAGATCCTGAACACGCAGATGCAAAAGTTCTTATGACGGATGAAACGGGAAGGCGTAACTACAgtaaatacaataaatttttaGCGATGCCTGTAATGAACGAAAACGGTGAAAACGAGTTTCACTATATCGATCAAAACGCGGCCGCTGATACAGCATTAGAGGAGGAGTCATACAATGATGTTAACGAGAATGCCAATATACCTATGGAAATGCAACCACTAAATCTACACACTCAATCTATGGACTATAAGTTTGACATGGATAGTAGACTACAAGATGGTAAAAAACCTAAAAAGACAATGTGGAAATGTAAAAAATGCAATTACAAGGATTCCTCAAAAGAAGCGTTAATAGAACACGTCCGGGAACATTCCAAACCAGAAGACTCCGAAGACGTTAAATCTGGAAACAATGCAAACAAAAAACCAGAAAACATGCCTGATCCTGCAGATTTAGCTTATCGGTGTGGACATTGCAACCAACTCTCTAATTGGAAACATGTTATACAGaGACATTGCCGCTTGAAACATGATGGAATAATAAAAGTTATAACGACTGTGAAACCAAAATTAGAAAATATGCCCACAACATCGACAGGTGAATTTGGTGGTGATATGTGCACAAAATGTCCATTTAAGACAAATGATAAGAACGTCCTGGCATCACATTTACTACAACATCAACCTTCAGCGCAGTCAATATTCAAATGCTACTTTTGCCCGTTTTTCGTCAAGGATGAACATGAATTAATACAGCATCTTGTTTTACATGGAATTTCGGATCCAGAAGAATATATATCGAAAGCAATGGGATGCAAATCTCCTTTACCAGAACATGGAGCAAATCCATTAAATCCGTGCGCTACAAAACGACACAGATGTACAGAATGCCCCTATGAAACCAACAGTAAATCTCAGTACATGTACCACGAGCAGTTCCATCGATTACCAGCAGACACTCCTTACAAATGTCAAGAATGTAATTACAGCGTATCCAAGAGGCATTTGCTCCATCAACATATGAGAGTTCATGGGATTCTCCCTAAAAAAAGTGAAATGGAGGCTGAGATGGAAGCAATGTCATCGAATTCTAATCAGGCTGATGACAAATCTGAATGTTTTAATAATCTTGACGAAATTCCTTACGTGTGGGTATCGGCCAAAAATGAATTCCacaaaatgtataaatgtcgTTATTGTTCTTACGTTAACTcacaaaaatgtaaaataccTAGTCACGAAAAAATTCACTGCGTCGTATTTGAGAACAGTGACATAACAATTTATAAATGTCTGGAGTGTAAATATACATGTGATAATAAAGCAGGATTAGCGGAACATTCCAAAGCGCATGCGGAAATATATGGTCGCATTTATTGCCCCGTAGACATGGACGTGCCTGACGAAGAACAGATAGCCAAATTACGAAAAGTAATCGATACAGAGAAACGAAATGTGCTAGAGGAATTACCAAAAGGGGAAGAGCATATAGGtgaaaaagaaactaaaactttGTACTTTTGTCAAAAATGTCCAGCTCGATTTTTCGCTGACGGTGAATTAAAAGTTCATGATAAGTTTCATGACTTAACCTTTTCAAATAAATGCAAAAGCTGTGCATTTTCTGTACCACAAGATGATGATTTAAATAGTCATACATTCGTTCACACGGATGAATACAATACTAAAACCAAAATGCTGAAATTTATTCATAAAACTCACTGGGCTTTTAAAGAGCCAAAATTACAGCTTGTTCACTGCCCGCTTACGTCTGAGATTACGTGGATTGTAGCAAATCCCGGTAAAAATTTTGACATTAATGAAAATAACAATAGAAAATCTATAGAAACAAAACATACTCCAAAGCAATACCTGTGTAAAGAATGCCCAgcaaaattctttaaaaattctgCACTAACATATCACGTTGGATTACATGGAGGAGATGGTGATCACAAATGTAAGAAATGTAGTTATGCTGTTAAAAATATCGGAAACCTAGCAAAACACGAGCTATTGCATGAAAATGAGACCAAATTATCAACATGCGATTATGAATCTGGAGATGATATGGACTTCAAAAACATTCCCTTATCAGGCACGGATTTATTTCAAAGAAAGACGGAGGCTCAAAAAAGAGTGCTCACGGATAAAGACAAGCTTGTGAAACCAAATGATCATTTTCCACCTGTACTCCAAGCTGATCCACAATTCGGCTATTTAATGCATGGAAATCCTGAGTTCATATACCCTACTTATCTTAAAAATGGACGTCagaaagaaaaacgttataAATGCCACAAGTGCCCATCGGCATTTGAAAAACGGGAACAATATAAGATACATCTTTCATTACATGGTTCGAAACAAAGGTATAAATGTGAACTATGTGACTATTCTGTAAAATATTACGCTAATTACGTTCAGCACATGAGGAAACATCAAATGAACGACGAAGCACAAGCCGAGAGGAAGAAAGGAATCAACGGACTTGAAGGACCTGAGTCTGAAAACATAGATGTAAAGCCAGACGATGGTGGggataatataaaattagcaATTAAAACTATGCCAAAAAGACCGGTTAAAAGTGATTTCCAACAATTTTCAATAAGCGATCAACAAACCCTACGGTTGTTACAACGTAGGCGTTCTTTGAATGTTTCCGGGAAAGACGCAAATACAGCTGATCCGTCGCCTACCAAAGATCGGAGACAACATATGTGTTTACTATGTCCTTACATAAACCAGCGCCAAGACGCGCTCAGCAATCACTACAGGAGACACGATGAAACCGACTCCCTCAGCAGTGGTAACCATAAATGTAATTATTGCGATTTAGTTGTTATACAATCTCATTTTCTTCGAGACCATGTGAAAACTCACTTTAATTACCAAAAGCACCATAACCCTGAATGTTTTGTAGCTAATGAAAACATTCGTTTTACAATTACCAAATTGGATGAAAATGATTTCTCGAGTGATCTCAAATTAGATAccctaaataaaaacaaattatcaaATAAGAAGAAAATATTCGTAAAAATCAAAACAGGAGAACTTTTTGTagattag
- Protein Sequence
- MRSMLQQMSSPQSAQLGEVATLVRPLEGRLCGDASSEASSDAAEDFELPQCKIKRNYNCTKCTFYTQNPRAYLVHTRDVHFERLKIYDCPYCIYASRHQQKLTRHVKMVHESTSVKETGTLLPPTSQPLEPIEKMEELLEEVEECDDMQIDVEDYNEEALERNFETESASANDAAPDQPTDRSNFFPCSKCNYVTHIRSRYTKHVKYHSMPMIKCTMCDFRTPYKWNLDRHMKNHGGNGSFHCTMCNFTADIRQSLTVHEMNHHSPPVGQTGSNRRRNRVGASDLPAGVDTTDASALILIEEEGSGDSHSSHSASEMGLQYMDKEVISCNSDSNEASTSETPKNENMQLSKDPEGEVALTSDEAKSQKQSRKAPRPIPQLIPLNASTPNQTKTLPGEPPAKKFKESSRIQTADIQKMETLPIDITLTPVNNLAAKDTSIRKKNESFFDRLKERLLTETGGEGTLVCKNCRFESKCLSEHSVHEKNCTTQSNRIPANALHSSLGSTRCQHCRHRCKSSADLYLHMQTCRKKDSAFENTSEGHNNDSTGTVLSNHEKDAEPHPMENVVFVWNDISHNSNKFETPLDISINDDSTLPEQIRGFELDIVDDNETMNLSPSQAVGKKVFKCPHCLFWAATASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHADAKVLMTDETGRRNYSKYNKFLAMPVMNENGENEFHYIDQNAAADTALEEESYNDVNENANIPMEMQPLNLHTQSMDYKFDMDSRLQDGKKPKKTMWKCKKCNYKDSSKEALIEHVREHSKPEDSEDVKSGNNANKKPENMPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGIIKVITTVKPKLENMPTTSTGEFGGDMCTKCPFKTNDKNVLASHLLQHQPSAQSIFKCYFCPFFVKDEHELIQHLVLHGISDPEEYISKAMGCKSPLPEHGANPLNPCATKRHRCTECPYETNSKSQYMYHEQFHRLPADTPYKCQECNYSVSKRHLLHQHMRVHGILPKKSEMEAEMEAMSSNSNQADDKSECFNNLDEIPYVWVSAKNEFHKMYKCRYCSYVNSQKCKIPSHEKIHCVVFENSDITIYKCLECKYTCDNKAGLAEHSKAHAEIYGRIYCPVDMDVPDEEQIAKLRKVIDTEKRNVLEELPKGEEHIGEKETKTLYFCQKCPARFFADGELKVHDKFHDLTFSNKCKSCAFSVPQDDDLNSHTFVHTDEYNTKTKMLKFIHKTHWAFKEPKLQLVHCPLTSEITWIVANPGKNFDINENNNRKSIETKHTPKQYLCKECPAKFFKNSALTYHVGLHGGDGDHKCKKCSYAVKNIGNLAKHELLHENETKLSTCDYESGDDMDFKNIPLSGTDLFQRKTEAQKRVLTDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKGINGLEGPESENIDVKPDDGGDNIKLAIKTMPKRPVKSDFQQFSISDQQTLRLLQRRRSLNVSGKDANTADPSPTKDRRQHMCLLCPYINQRQDALSNHYRRHDETDSLSSGNHKCNYCDLVVIQSHFLRDHVKTHFNYQKHHNPECFVANENIRFTITKLDENDFSSDLKLDTLNKNKLSNKKKIFVKIKTGELFVD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00802438;
- 90% Identity
- iTF_01092645;
- 80% Identity
- -