Hsem008588.1
Basic Information
- Insect
- Hipparchia semele
- Gene Symbol
- -
- Assembly
- GCA_933228835.1
- Location
- CAKOGE010000047.1:310098-312038[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.9e-10 2.2e-07 30.8 0.0 1 37 10 45 10 51 0.91
Sequence Information
- Coding Sequence
- ATGTCCAAGAGACCAATCCACCAATATAAAGAAGAACAATTGACAGAGGCCATGGCGGCGATTAGAAACGGAATGAAAATTAGAGAAGCCAGTCGAGTTTTTAAGGTTCCGCGAGGGACGTTACAGGATCGACTACATTTAAGGGTTCCAGATTTGCCCCGTAAAATGGGACCGGATTCAGTGCTGACCAAAACTGAAGAAACTATATTGAAAGACTGGTGTATTGCATTAGCGAAATGTGGCTTCCCATTAAAACGTGACGATCTCCTGAATACCgtccataatattatatctgaaGATAAAAGACCAAACccatttataaataatagaCCAGGGAAGAAATGGTACCAATCATTCTTGAGACGAAATCCCGAGTTAAGTGAAAGAACTCCTGAAAATATATCTAAGGGTAGAGCCGCTGTAACTGAAGAAGGTATTCGGAAGTGGTTTGCTGAACTTATGAAGCATTTAGAAGACATAAATGCAAGTGATATTTTGACCGACCCTGACCGAATATTTAACGGTGATGaaactagtttttatatatgcCCCAAGACTGGAAAAGTCATTGCACCAAGGGGATATAAAAATGTCTACCAAATTGTAAAGGGCAAGGAAAAAGAAGCTATCACTGTCCTTATATTTATATCGGCTTCCGGGAAAATTTTACCTCCTTGTGTAGTTTTTCCGTACATAAGACCACCAAAAGATATTATTAACAGTATGCCTGATAGATGGTTATTGGGAAAATCAGAAACAGGTTGGATGAAATCAGAAATTTTTTACGACTATATTGTTAAAGGTCTGAACGAATGggtgaaagaagaaaaaataaaaaaacctgttCTCATTTTTGTTGATGGCCACAAGAGCCACTTAACAATGCGTCTCAGCGAATATTGTCACGAAAACGGTATTATCCTTTATGCACTTCCACCAAATGCAACACATTTGATTCAGCCTGCTGATGTTAGTGTATTTAAACCTTTCAAGGTAGAATGGAAAAATACCGTGTATGAATGGGCAACTCGACCTGAAAATGTCAATAGTGTTTTGACCAAGGCAACATTTTGTCCATTACTTAAAAAGGTCTTAGAGAAAGAAAATTTGTCTAGAACAATCATCAACGGTTTTCGCAAATGTggattatacccatgcaatccAAACGCTTTGGACTACACAAAATGTGTGCAGAATAATCTTGAAAAACATCATAACGCTACCAGGAATCCGAAATCTCCAGGTAGCAAAATTAAGAACAGGCACTTGAATACCGCCATCAAGTGTATTAACCATCTAAGTAACGAGCTAGAAAATGTTGGAGTAGACACAACAACTGTTATCAATGTTTTGAGTGCGGCAATTAATATGAACGAACCTGAAAGTTTAAATTCAACAAAAAACACAACTATGGATTCGAAAATTGATAATATTTCTGCCTGTGGTAGTGATAAAAACCAATCTAAAATAGCATCAGGATCAAATGAAATTATTGACATAAGTTTGCCTATTATAGGTGATTACACAttggaaaataatttaaataccttTACAGAAGAAGAGGTATTCTCGAACGAATTCGAAATCATAACAGACATTGCAGTGATTCACCAAAATGATGAAATTCAAGATCAAACACCAATATTTATTGCAAATAATCAAAACGGCAACTGCGTTAAAGAATGGCCCACTAATGAGACACCGAAATCAATTTCTGAAAAATATATCGAAAAGAAAGATATTAAACTAGGAATAAGTTATAATCATGGTATAATTGATAAAGAAAATGAAGATGTTGGACAAGAAATACATACTTACTGTTACATGGAAAATAAAAGAGACGCATTGCTCCCAGaaaatagtaattataaaaTGGATAATGTGAAAGGCATAAGGACCGACATTGCGGTGATTCACCAGAATGGTGAAATTCAAGGTTAA
- Protein Sequence
- MSKRPIHQYKEEQLTEAMAAIRNGMKIREASRVFKVPRGTLQDRLHLRVPDLPRKMGPDSVLTKTEETILKDWCIALAKCGFPLKRDDLLNTVHNIISEDKRPNPFINNRPGKKWYQSFLRRNPELSERTPENISKGRAAVTEEGIRKWFAELMKHLEDINASDILTDPDRIFNGDETSFYICPKTGKVIAPRGYKNVYQIVKGKEKEAITVLIFISASGKILPPCVVFPYIRPPKDIINSMPDRWLLGKSETGWMKSEIFYDYIVKGLNEWVKEEKIKKPVLIFVDGHKSHLTMRLSEYCHENGIILYALPPNATHLIQPADVSVFKPFKVEWKNTVYEWATRPENVNSVLTKATFCPLLKKVLEKENLSRTIINGFRKCGLYPCNPNALDYTKCVQNNLEKHHNATRNPKSPGSKIKNRHLNTAIKCINHLSNELENVGVDTTTVINVLSAAINMNEPESLNSTKNTTMDSKIDNISACGSDKNQSKIASGSNEIIDISLPIIGDYTLENNLNTFTEEEVFSNEFEIITDIAVIHQNDEIQDQTPIFIANNQNGNCVKEWPTNETPKSISEKYIEKKDIKLGISYNHGIIDKENEDVGQEIHTYCYMENKRDALLPENSNYKMDNVKGIRTDIAVIHQNGEIQG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00255801;
- 90% Identity
- iTF_01091738; iTF_01091785; iTF_00120443; iTF_00120439; iTF_00120440; iTF_00120441; iTF_00120442;
- 80% Identity
- -