Achi000410.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Antitype chi
Gene Symbol
-
Assembly
GCA_947359405.1
Location
OX375837.1:9069887-9076425[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.7e-09 1.6e-06 28.1 0.0 1 37 74 109 74 115 0.91

Sequence Information

Coding Sequence
ATGGCACAAATCTGGAGGAAATTGCCGGCCTTTGTGGCTGCGTCGACCTCCTGTGCCATCCGCAAGGCACGGGGGGTGCAGAACGTTAAAAAGGCGCTGTCCAAGATGTTATACGCGACGGCTTGGGTCATGTTCGCGGGACCGGCTGCAGGGTTCGCGACGGCGGCGACGGGGGTGACggggATTTCCATCATGTCCAAGAGACCAATCCACCAATATAAAGAAGAACAATTGATAGAGGCTATGGCCGCGATTAGAAAAGGAATGAAAATTAGAGAAGCCAGTCGAGTTTTTAAGGTTCCGCGAGGGACGTTACAGGATCGACTACATTTAAGGGTTCCAGATTTGCCCCGTAAAATGGGACCGGATTCAGTGCTGACCAAAACTGAAGAAACTACACTGAAAGACTGGTGTATAGCATTAGCGAAATGTGGATTCCCATTAAAACGTGATGATCTCCTCAATACCGTCCATAATATTATATCAGAAGATAAAAGACCAAACCCATTTGTAAATAATAGACCAGGGAAGAAATGGTACCAATCATTTCTGAGACGAAATCCCGAGTTAAGCGAGAGGACACCTGAAAATATATCTAAGGGTCGAGCCGCTGTAactgaagaaggtattcgaaagtggtttgctgaacttatgaagcatttagaagacataaatgcaagtaatattttgaccgaccctaaccgaatatttaacggtgatgaaactagtttttatatatgccccaagactggaaaagtcattgcaccaagaggatacaaaaatgtttaccaaattgtaaaaggcaaggaaaaagaagctgttactgtccttatatttatatcggcttccgggaaaattttacctccttgtgtagtttttccgtacgtaagaccaccaaaagatgttataaacagtatgcctgatagatggttattgggaaagtcagaaacaggttggatgaaatcagaaattttttacgattatattgttaacggtctgaacgaatgggtgaaagaagaaaaaataaaaaaacctgttctcatttttgttgatggtcacaagagccacttaacaatgcgtctcagcgaatattgtcacgaaaacggtattatcctttatgcacttccaccaaatgcaacacatttgattcagcctgctgatgttagtgtatttaaacctctcaaggtagaatggaaaaataccgtGTACGAATGGGCAACTCAACCTCAAAATGTCAATAGTGTTTTGACCAAGGCAACATTTTGTCCATTACTTAAAAAGGTCTTAGAGAAAGAAAATTTGTCTAGAACAATCATCAACGGTTTTCGCAAATGTGGATTATACCCATGCAATCCAAACGCTTTGGACTACTCAAAATGTGTGCAGAATAATCTTGAGAAACATCATACCGCTACCAGGAATTCGAAATCTCCAGGTACCAAAATTAAGAACAGGCATTTGAATACCGCCATCAAGTGTATTAATCATCTAAGTAACGAGCTAGAAAATGCTGGAGTAGACACAACGACTGTTATCAATGTTTTGAGTTCGGCAATTAATATGACCGGAACTGAAAGTTTAAATTCAACAAAAAACTCAACTATAGATTCCAAAATTGATAACATTTCTGCCTGTGGTATTGATAAAAACCAATCAAAAATAGCATCAGGAACAAATGAAATTATTGACATAAGTTTGCCAATTATAGGCGATTACACATTGGAAAATAATTTAAATACCTTTACAGAAGAAGAGGTATTCTCGAACGAATTCGAAATCATAACCGACATTGCAGTGATTCACCAAAATGGTGAAATTCAAGATCAAACACCAATATTTGTTGCAAATGATCAAAACGGCGACTGCGTTAAAGAATGGCCCACTAATCAGACACCGAAAACAATTTCTGAAAAAAATACCGAAAAGAAAGACATTAAACTAGGAATAAGTACTAATCATGGTATAATTGATAAAGAAAATGAAGATGTTGGACAAGAAATACATACTTACTATGAAATGGAAAATACAAGAGACGCATTGCTCCCAGAAAATAATAATTATATAATGGATAATGTGAAAGGCATAAGGACAGATTGTAACCTTGATCCAATCAAATATAAGACTGAACAAGACGAGACAAAAAATATGGAATCTGTACTACATGACAGTAACAAAAATATAAAAAGCAAAATAAAAATATTGTCCGATGTGATTGTGAAAGCGGGAGATGTGTCGCCCATTTTAAATAAGTATTTAACCTTGCCTGCTGTAACTAGATCAAAAAATAAGATAAAATCAATCAATAGAATAGGAGCTATTTCTTCCAAAGAGTGGAGACAATTTGAAAGACAAAAAGAAGAGATGAAGGAACAGAAAAAGAACGAAATAATAAGTAAGAAACTTAAAAGACTTGAAATTAAGGCAAAGAAAGAAGAAGAGAAACAAAAAAAGAAAGAAGAAATACAAAAAAGGAAAGCGGAAATGCTGTTGAATTCTAACAAAAGTAAAAAGAAAAAGAACAAAAGGACATGTACTATAAACAGAATAAGATGTAATAATTGTGAAGAGGAAATGACTAGCGATACCGAAATCAACGACCTAAAAAATATTGGATGTGATAATTGCCCTGCATGGTACCATTTAAAATGCACTGAATTCGCTGGGGATATGTATGACAATATATATAATAAGAAATTTATATGCCAAATATGCAAAGTTAGTGAGGGGCTGACTTTAGGGTAA
Protein Sequence
MAQIWRKLPAFVAASTSCAIRKARGVQNVKKALSKMLYATAWVMFAGPAAGFATAATGVTGISIMSKRPIHQYKEEQLIEAMAAIRKGMKIREASRVFKVPRGTLQDRLHLRVPDLPRKMGPDSVLTKTEETTLKDWCIALAKCGFPLKRDDLLNTVHNIISEDKRPNPFVNNRPGKKWYQSFLRRNPELSERTPENISKGRAAVTEEGIRKWFAELMKHLEDINASNILTDPNRIFNGDETSFYICPKTGKVIAPRGYKNVYQIVKGKEKEAVTVLIFISASGKILPPCVVFPYVRPPKDVINSMPDRWLLGKSETGWMKSEIFYDYIVNGLNEWVKEEKIKKPVLIFVDGHKSHLTMRLSEYCHENGIILYALPPNATHLIQPADVSVFKPLKVEWKNTVYEWATQPQNVNSVLTKATFCPLLKKVLEKENLSRTIINGFRKCGLYPCNPNALDYSKCVQNNLEKHHTATRNSKSPGTKIKNRHLNTAIKCINHLSNELENAGVDTTTVINVLSSAINMTGTESLNSTKNSTIDSKIDNISACGIDKNQSKIASGTNEIIDISLPIIGDYTLENNLNTFTEEEVFSNEFEIITDIAVIHQNGEIQDQTPIFVANDQNGDCVKEWPTNQTPKTISEKNTEKKDIKLGISTNHGIIDKENEDVGQEIHTYYEMENTRDALLPENNNYIMDNVKGIRTDCNLDPIKYKTEQDETKNMESVLHDSNKNIKSKIKILSDVIVKAGDVSPILNKYLTLPAVTRSKNKIKSINRIGAISSKEWRQFERQKEEMKEQKKNEIISKKLKRLEIKAKKEEEKQKKKEEIQKRKAEMLLNSNKSKKKKNKRTCTINRIRCNNCEEEMTSDTEINDLKNIGCDNCPAWYHLKCTEFAGDMYDNIYNKKFICQICKVSEGLTLG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00120439; iTF_00120440; iTF_00120441; iTF_00120442; iTF_00256837; iTF_01333740; iTF_00408399; iTF_00408400; iTF_00722989; iTF_01091738; iTF_01091785; iTF_00186108; iTF_00186105; iTF_00186107;
90% Identity
iTF_00801751;
80% Identity
iTF_00120439;