Hsem001181.1
Basic Information
- Insect
- Hipparchia semele
- Gene Symbol
- E2F4
- Assembly
- GCA_933228835.1
- Location
- CAKOGE010000005.1:6965774-6969475[-]
Transcription Factor Domain
- TF Family
- E2F
- Domain
- E2F_TDP domain
- PFAM
- PF02319
- TF Group
- Helix-turn-helix
- Description
- This family contains the transcription factor E2F and its dimerisation partners TDP1 and TDP2, which stimulate E2F-dependent transcription. E2F binds to DNA as a homodimer or as a heterodimer in association with TDP1/2, the heterodimer having increased binding efficiency. The crystal structure of an E2F4-DP2-DNA complex shows that the DNA-binding domains of the E2F and DP proteins both have a fold related to the winged-helix DNA-binding motif. Recognition of the central c/gGCGCg/c sequence of the consensus DNA-binding site is symmetric, and amino acids that contact these bases are conserved among all known E2F and DP proteins.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.4e-29 4.3e-25 87.6 0.3 2 65 11 75 10 75 0.98
Sequence Information
- Coding Sequence
- ATGACGGAATTATACAGTTATAAACGTTATGAAAAATCGTTGGGGTTACTTACTACAAGATTTGTGACACTTCTTCAAAAAGCAAAGGACGGTGTTTTAGATTTAAAAGTCGCCACCGATTTATTAGCTGTTAGGCAAAAAAGAAGAATATATGATATAACGAATGTTTTAGAAGGAATTGGTCTGATTGAGAAGCGTAGTAAAAACAGTATACAATGGAAAGGTGCTGCCCCCGATTGTAACGCTTCTGATATTGGTACTAAGGTGCACCAATTaagaaaagaaataaatttGTTGGAAGAACACGAACAATTATTAGATAAacAAATGCATTGGATAGAACAAAGtattaaaaatgttattgaTGACACTGATAATGAGACATTGACATATGTAACGGAAAATGACATTAAGGAATGTTTTGCCAATGAccaaatttttgttttggaagCACCACTTGGTGCTGATTTGGCTGTTGGGAGATTACCTGGCAAGgAACCAGGTGAAGATCACAAGTTTTTTTTGCATGTAAAATCAACTAATCCCATTGGAGTTATATTATTGTGTGATGTGGAAAAAGAAAAGCTAATTGGAGATGATAATATGGACCTAGAAGTTCAAAGTTACACAGATGGTACTGAGGATATATTGCAATGCCCTAattatcTCCTACGATTGAGTCCACCCGTTACGAAACAAGACTTTTCATTTTCATTGCGTGGCTCTGAAGGCTTATGTGATCTCTTTGATATTCCTTGTtag
- Protein Sequence
- MTELYSYKRYEKSLGLLTTRFVTLLQKAKDGVLDLKVATDLLAVRQKRRIYDITNVLEGIGLIEKRSKNSIQWKGAAPDCNASDIGTKVHQLRKEINLLEEHEQLLDKQMHWIEQSIKNVIDDTDNETLTYVTENDIKECFANDQIFVLEAPLGADLAVGRLPGKEPGEDHKFFLHVKSTNPIGVILLCDVEKEKLIGDDNMDLEVQSYTDGTEDILQCPNYLLRLSPPVTKQDFSFSLRGSEGLCDLFDIPC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00642138; iTF_01151017; iTF_01017532; iTF_01018372; iTF_00953312; iTF_00954203;
- 90% Identity
- -
- 80% Identity
- -