Hkul007365.1
Basic Information
- Insect
- Himalopsyche kuldschensis
- Gene Symbol
- nfxl1
- Assembly
- GCA_028554975.1
- Location
- JAHFWI010000038.1:9877042-9884325[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2 2.8e+04 -7.8 5.6 15 19 166 170 165 170 0.81 2 19 0.35 4.8e+03 -1.7 0.2 4 10 201 207 201 207 0.94 3 19 3.2e-06 0.045 14.4 13.8 1 19 215 232 215 232 0.90 4 19 0.55 7.7e+03 -2.3 0.1 5 10 257 262 254 262 0.81 5 19 2.6e-08 0.00037 21.1 15.1 1 19 268 286 268 286 0.96 6 19 1.2e-07 0.0017 18.9 10.5 1 19 321 339 321 339 0.99 7 19 0.0034 47 4.8 11.0 1 18 374 393 374 394 0.78 8 19 0.044 6.1e+02 1.2 0.8 1 12 403 414 403 416 0.92 9 19 0.00034 4.8 7.9 13.9 1 18 428 445 428 446 0.92 10 19 7.4e-07 0.01 16.4 15.1 3 19 457 473 455 473 0.93 11 19 0.09 1.3e+03 0.2 5.6 10 19 522 531 520 531 0.89 12 19 0.18 2.5e+03 -0.7 6.4 3 11 541 549 534 550 0.76 13 19 0.63 8.8e+03 -2.5 5.8 14 19 578 583 578 583 0.90 14 19 0.011 1.6e+02 3.1 13.4 1 18 619 639 609 640 0.91 15 19 0.36 5.1e+03 -1.7 16.0 3 19 652 668 651 668 0.90 16 19 1.9 2.7e+04 -4.0 1.4 8 13 673 678 672 678 0.72 17 19 1.7 2.4e+04 -3.9 1.6 6 10 703 707 702 707 0.86 18 19 2.7e-05 0.38 11.5 9.3 1 15 713 726 713 732 0.93 19 19 0.53 7.4e+03 -2.3 0.6 5 10 761 766 761 766 0.93
Sequence Information
- Coding Sequence
- ATGGCCGATAGAAATTCAAAGGATCCATGGAAAAAAAAACCATGGGGAAAAGGCAAGAATGCTGGTACTACTGCACAAGAGCGTCATGTTGCAAAATCATCAATAGATAATGCTGAGACTAGATTTAAGGAAGCGAGTGAAAAATTACAAGCCTCAGCTCAAAAACACATTCAGCATTATGAGTCCTCATCTGACGAAGAGGATCTTGAAAAAGATAATATTCTCGAAGGTGTATTGGGAAACTATGTCACTGATGATAAAGAATTTAATTTAAAAAAAACGAAAGATTTCCTCACTGTTATTTGTCTTATTTGTATTGAATCTGTCAAAAGAAACCAACCTATATGGAACTGTTCAACATGCTTCAACGGATTTCATTTACTTTGCATACAACGGTGGGCAAATGATACAATTTATCAACAGAATTTGACTAAATCGCCAAATCTCTCAGGTCTCCCAGTTCGAGATAATACTTTTAAGGAGATTGTGTGGTGTTGCCCTAAGTGTAGATGCCAATACAATCAGGATGAAGTCCCGAAAACGTATGAATGTTTCTGTAAAAAACAAAGAAATCCTGAAATTCAACCATGGCTGGTTCCTCACTCTTGTGGAGCAATCTGTAACAAACATTTAAAGCCTGAGTGTGGTGATACGTGTCTATTGTTATGTCATCCAGGTCCTTGTCCACCTTGTCCAAAATTGGTTCACATATCTTGCAACTGCAAGAAAAGCTCAATCAAACCAGTTAGATGTAGTGTTGGTAATTGGAGTTGCAATAAGATATGTAGTAAACTCTTATGCTGTAATATTCACAAGTGTGATAAGACCTGTCATCCCGGCGAATGTCAGCCTTGCCCCAAAACAAGATTACAAAAATGTCTTTGTAAGAAGAAGTCTGAAAGTGTTCCTTGCGCCAAGTTAACTTGGCAATGTGATAATATTTGTGGGAAATTATTTTCATGTGGTTATCATAGATGTGACAGTTTATGCCATGATTTAAATTGTGGCCCATGCCCATTCACTGGATCACAAAAATGTCCATGTGGGTCTACAATAAAAGAAGTTACCTGTCCTGATAAAGTAACATCGTGTGGCGGTACTTGTGGTAAAGAATTACTTTGTGGAATACATCAATGCCCGCTTAAATGCCATCTTTCACCAGAAAAATGTTCTGAGTGTCAGGTGTTTGTTGAAAAGTCATGTCGTTGCGGAAGTCATGTTAAAGAATTGCCATGCCATAAAGAATTTTTATGCCAGACCAAATGCAAGAACATGAAAGAATGTGATCGCCATCCATGTAATAAGAAATGCTGCGACGGAGACTGCTCGACCTGTAATAAGATCTGTGAAAAAACTCTACAATGTAAGAAGCATAAATGCCCATCAGCTTGTCACACTGGTCCTTGTTACCCTTGCCCTTTGCAAGTGAAAGTACCATGTTTTTGTGGGAATACTTATTTCAATGTTCCTTGTGGAAGACAAAGACGGACAAAACCACCAAAGTGCTCTCGTAACTGTAGGATTCCCTCTACTTGTAATCATGTTGCAGAGAATGTTCATTCATGTCACTTTGATGCTTGTCCTCCATGCAAACAAACTTGTGGAAAACTGTTATCTTGTAAGCATACTTGTTTTGCGCAGTGCCACAATGCTGTTCAAGTAGTTTTACCTACTCCTAAAGCTACTGGTCCCTGGGATCTACAGGCTCCAAAAGTTGAAGTCAAAGCTCTTCCATGCCCACCATGCAAAGTACCAGTTGTTCGTTCTTGCTTAGGACGACACGAAGAATCAAAATGGCCATGTAGCACGGCAAAAGTATCTTCGTGCGGAAGGATATGTGGTCAGTTACTGCCTTGCACAAATCATGCTTGCTCCCGAGAATGCCACAATATTGCAACAGGAAACTGTGAAAATTGTGAACGTCAATGTGAACTGTCAAGGCCCGAAGGCTGTACACATCCATGCACCAAGCAATGTCATCCATCACCGTGTAATGATTGCCAACAATTTTTGAAGCGGTCTTGTCACTGTGGCTTAACCGAGCTCTTTATTAAATGTTTTGCTCTCACAAGCTCAGATTCAACTGTCAAAGAACAACATCTCTCCTGCCAACAGCGTTGTATCAAATTGTTAAAGTGCGGACACAGATGTAGTACTATTTGTCATTCTGGAGTATGTGTTGTCAAAATTTGTCAGAGTAAAACTCGAATGTATTGTGCATGTCGCCGTATCAAAAAGGATATTGCCTGCAATTTGATATTAAAAAATGAACCCAATGTTCGTTGTGATGAACTATGTGAAAAAAAAATGCAAGAGGAGTTACTGATCAAAGAAGAAGAAACCAGAAAAAAGAAGCTCGAGGAAGATGAAAAGAATCGCATCGAAATTGCAAAATATGAAAACAAGTTTGGAAAGAAAATACCAAAGAATAGAGAAAAACGAAAGGGGTTAGGTAGAAAAAGTCTCAAGCAAATTTTGCCTAAATGCACCAACAAAATCTTGTAA
- Protein Sequence
- MADRNSKDPWKKKPWGKGKNAGTTAQERHVAKSSIDNAETRFKEASEKLQASAQKHIQHYESSSDEEDLEKDNILEGVLGNYVTDDKEFNLKKTKDFLTVICLICIESVKRNQPIWNCSTCFNGFHLLCIQRWANDTIYQQNLTKSPNLSGLPVRDNTFKEIVWCCPKCRCQYNQDEVPKTYECFCKKQRNPEIQPWLVPHSCGAICNKHLKPECGDTCLLLCHPGPCPPCPKLVHISCNCKKSSIKPVRCSVGNWSCNKICSKLLCCNIHKCDKTCHPGECQPCPKTRLQKCLCKKKSESVPCAKLTWQCDNICGKLFSCGYHRCDSLCHDLNCGPCPFTGSQKCPCGSTIKEVTCPDKVTSCGGTCGKELLCGIHQCPLKCHLSPEKCSECQVFVEKSCRCGSHVKELPCHKEFLCQTKCKNMKECDRHPCNKKCCDGDCSTCNKICEKTLQCKKHKCPSACHTGPCYPCPLQVKVPCFCGNTYFNVPCGRQRRTKPPKCSRNCRIPSTCNHVAENVHSCHFDACPPCKQTCGKLLSCKHTCFAQCHNAVQVVLPTPKATGPWDLQAPKVEVKALPCPPCKVPVVRSCLGRHEESKWPCSTAKVSSCGRICGQLLPCTNHACSRECHNIATGNCENCERQCELSRPEGCTHPCTKQCHPSPCNDCQQFLKRSCHCGLTELFIKCFALTSSDSTVKEQHLSCQQRCIKLLKCGHRCSTICHSGVCVVKICQSKTRMYCACRRIKKDIACNLILKNEPNVRCDELCEKKMQEELLIKEEETRKKKLEEDEKNRIEIAKYENKFGKKIPKNREKRKGLGRKSLKQILPKCTNKIL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00799891;
- 90% Identity
- iTF_00800683; iTF_00799891;
- 80% Identity
- -