Hjap021024.1
Basic Information
- Insect
- Himalopsyche japonica
- Gene Symbol
- nfxl1_1
- Assembly
- GCA_028555115.1
- Location
- JAHFWJ010000759.1:860449-867091[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2 2.4e+04 -7.8 5.6 15 19 166 170 165 170 0.81 2 19 0.35 4.3e+03 -1.7 0.2 4 10 201 207 201 207 0.94 3 19 3.2e-06 0.04 14.4 13.8 1 19 215 232 215 232 0.90 4 19 0.56 6.9e+03 -2.4 0.1 5 10 257 262 254 262 0.81 5 19 2.7e-08 0.00033 21.0 15.1 1 19 268 286 268 286 0.96 6 19 5.4e-08 0.00066 20.1 12.6 1 19 321 339 321 339 0.99 7 19 0.0034 42 4.7 11.0 1 18 374 393 374 394 0.78 8 19 0.092 1.1e+03 0.2 1.8 1 12 403 414 403 415 0.92 9 19 3.7e-06 0.045 14.2 15.5 1 19 428 446 428 446 0.97 10 19 7.6e-07 0.0092 16.4 15.1 3 19 457 473 455 473 0.93 11 19 0.065 8e+02 0.6 7.5 9 19 521 531 520 531 0.92 12 19 0.11 1.3e+03 -0.1 6.6 3 11 541 549 534 550 0.76 13 19 0.64 7.8e+03 -2.5 5.8 14 19 578 583 578 583 0.90 14 19 0.01 1.2e+02 3.2 14.0 1 18 619 639 609 640 0.92 15 19 0.37 4.5e+03 -1.8 16.1 3 19 652 668 651 668 0.91 16 19 1.9 2.4e+04 -4.1 1.4 8 13 673 678 672 678 0.72 17 19 1.7 2.1e+04 -3.9 1.6 6 10 703 707 702 707 0.86 18 19 5.2e-06 0.063 13.7 9.8 1 16 713 727 713 732 0.86 19 19 0.54 6.6e+03 -2.3 0.6 5 10 761 766 761 766 0.93
Sequence Information
- Coding Sequence
- ATGGCGGAAAGAAACTCAAAGGATCCATGGAAAAAAAATCAATGGGGAAAAGGCAAGAATGTTGGTACGACTGCACAAGGCCGTCACGTCACTAAATCATCAGTGCAGAATGCTGAAACTAGATTTAAAGAAGCAAGTGAAAAATTACAAGCGTCAGCTCAAAAACACATTCAGCATTATGAATCTTCGTCCGATGAAGAGGATCTAGAAAAAGATAACATTCTTGAAGGTGTTTTAGGAAACTATATAACAGATGATAAAGAATTTAATTTAGAGAGAACGAAAGATTTTCTCACTGCTATTTGTCTTATTTGTATTGAATCTGTGAAAAGAAATCAACCTATATGGAACTGTTCAACATGTTTCAATGGATTTCACCTACTCTGTATACAACGGTGGGCAAATGATACAATTTATCAGCAGAATTTAATTAAATCGCCAAACCTCTCAGGTCTTCCAGTTCGAGATAACACTTTTAAAGAAATTGTGTGGTGCTGTCCCAAGTGCAGGTGTCAATACAGTCAGGATGAAATACCAAAGACATATGAATGTTTCTGTAAAAAACAAAAAAATCCTGAAATCCAACCGTGGCTAGTTCCCCACTCTTGTGGAGCAATTTGTAATAAACCTTTGACACCAAAGTGTGGTGATACCTGTCTTTTGTTATGCCATCCAGGCCCTTGTCCACCATGTCCAAAATTGGTTCACATATCTTGCAACTGCAAGAAAAGCCCAAACAAACCAGTTAGATGCAGTGTTGGCAATTGGAGCTGTAATAAAATATGTGACAAACTGTTATGCTGTAATATCCACAAATGCGATAAGACTTGCCATCCTGGTGAATGCCAGCCTTGTCCAAAAACAAGATTACAAAAATGTCTTTGTCAGAAAAAGTCTGAAAATGTTCCTTGCGCTAAGCTATCTTGGCAATGTGATAATATTTGTGGAAAATTATTTTCATGTGGTTATCACAAATGTGATAAGCTATGTCACAGTTCGAATTGTGGTCCATGTCCATTTACTGGATTGCAAAAATGTCCATGTGGGTCCACAATAAAAGAAGTTACATGTCCTGATAAGGTAACTTCGTGTGGAGGCACTTGCAATAAAGAGTTGCCTTGTGGAATACATCAATGCCCTCTTAAATGCCATCTGTCACCAGAAAAATGTTCTGAGTGTCAGGTGTTTGTTGAAAAGTCATGTCGCTGTGGAAGTCATGTGAAAGAATTGCCATGCCATAAAGAATTTTTATGTCAGACAAAGTGCAAGAACATGAAAGAATGTGGCCGCCATCCGTGTAATAAGAAATGTTGTGACGGAGATTGCTCATCATGCACAAAGATCTGTGAAAAAACCCTACAGTGTAAGAAGCATAAATGCCCATCAGCTTGTCATACTGGTCCTTGTTATCCTTGCCCTTTACAAGTGAAGGTGACATGTTTTTGTGGAAATACTTATTTCAATGTTCCTTGCGGTAGACAAAGACGAACAAGACCTCCCAAGTGCTCCCGCAACTGCAGGATTCCCCCTACATGTAATCATGTAAAAGAGAATGTTCATCCATGTCATTTTGACGATTGTCCTCCCTGCAAGCAAACATGTGGAAAACTATTATCCTGTAAGCATACTTGCTATGCGCAGTGCCACAATGCTGTTCAAGTTGTTTTACCTACTCCTAAGGCCACTGGTCCGTGGGATCTACAAGCTCCAAAAATTGAAGTCAAATCTCTCCCGTGCCCACCCTGTAAAGTACCGGTTGTTCTTTCTTGTTTGGGACAACACGAAGAGTCAAAATGGCCGTGTAGCACAGCAAAAGTATCTTCATGTGGAAGGATATGTGGTCAGTTACTACCTTGCACTAATCATGCCTGCTCCCGAGAATGTCACAATATTGCTCCAGGAAACTGTGAAAATTGTGAACGTCAATGTGAACTATCAAGGCCAGAAGGATGTACTCATCCTTGTACTAAGCAATGTCATCCATCGCCGTGTAGTGATTGTCAACAATTTTTAAAGCGATCATGTCACTGTGGTCTAACTGAGCTGTTTATAAAATGTTTTGCTCTCACAAGTTCAGATGCAACTGTCAAAGAACAACATCTCTCTTGTCAACAGCGATGTATCAAACTGTTGGATTGCGGACATAGATGTAGTTCTATTTGTCATTCTGGAGTGTGTACTGTCAAAGTCTGTCAGGGTAAAACCAGGATGTTTTGTGCATGTCGCCGTATCAAAAAAGATATTGCCTGCAATTTGATATCAAAAAATGAGCCTAATGTTCGTTGTGATGAATTATGTGAAAAAAAATTGCAAGAGGAGCTATTGGTCAAAGAAGAAGAAATGCGTAAAAAGCAGCTCGAAGAGGATGAAAAGAATCGGATTGAAATTGCGAAATATGAAAGCAAATTTGGCAAGAAAATTCCAAAGAATAGAGAAAAACGGTCTGTCGCAAAGCAAGAAACAAATTTTTTCTTGAAATATTGGTTTGTTTTCATTTCAATAATTATTGGTGTCGCCGCCATGATTATAATTCTATTGATTAAAGCTGATTGA
- Protein Sequence
- MAERNSKDPWKKNQWGKGKNVGTTAQGRHVTKSSVQNAETRFKEASEKLQASAQKHIQHYESSSDEEDLEKDNILEGVLGNYITDDKEFNLERTKDFLTAICLICIESVKRNQPIWNCSTCFNGFHLLCIQRWANDTIYQQNLIKSPNLSGLPVRDNTFKEIVWCCPKCRCQYSQDEIPKTYECFCKKQKNPEIQPWLVPHSCGAICNKPLTPKCGDTCLLLCHPGPCPPCPKLVHISCNCKKSPNKPVRCSVGNWSCNKICDKLLCCNIHKCDKTCHPGECQPCPKTRLQKCLCQKKSENVPCAKLSWQCDNICGKLFSCGYHKCDKLCHSSNCGPCPFTGLQKCPCGSTIKEVTCPDKVTSCGGTCNKELPCGIHQCPLKCHLSPEKCSECQVFVEKSCRCGSHVKELPCHKEFLCQTKCKNMKECGRHPCNKKCCDGDCSSCTKICEKTLQCKKHKCPSACHTGPCYPCPLQVKVTCFCGNTYFNVPCGRQRRTRPPKCSRNCRIPPTCNHVKENVHPCHFDDCPPCKQTCGKLLSCKHTCYAQCHNAVQVVLPTPKATGPWDLQAPKIEVKSLPCPPCKVPVVLSCLGQHEESKWPCSTAKVSSCGRICGQLLPCTNHACSRECHNIAPGNCENCERQCELSRPEGCTHPCTKQCHPSPCSDCQQFLKRSCHCGLTELFIKCFALTSSDATVKEQHLSCQQRCIKLLDCGHRCSSICHSGVCTVKVCQGKTRMFCACRRIKKDIACNLISKNEPNVRCDELCEKKLQEELLVKEEEMRKKQLEEDEKNRIEIAKYESKFGKKIPKNREKRSVAKQETNFFLKYWFVFISIIIGVAAMIIILLIKAD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00799891;
- 90% Identity
- iTF_00801491;
- 80% Identity
- -