Hano019594.1
Basic Information
- Insect
- Himalopsyche anomala
- Gene Symbol
- nfxl1
- Assembly
- GCA_031772345.1
- Location
- CM062844.1:16382178-16390517[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 2 2.2e+04 -7.8 5.6 15 19 166 170 165 170 0.81 2 20 0.35 3.8e+03 -1.7 0.2 4 10 201 207 201 207 0.94 3 20 2.1e-05 0.23 11.8 13.3 6 19 219 232 215 232 0.93 4 20 0.56 6.1e+03 -2.4 0.1 5 10 257 262 254 262 0.81 5 20 8.1e-08 0.00087 19.5 13.7 1 19 268 286 268 286 0.95 6 20 8.2e-08 0.00088 19.5 10.5 1 19 321 339 321 339 0.99 7 20 0.0034 37 4.7 11.0 1 18 374 393 374 394 0.78 8 20 0.092 9.9e+02 0.2 1.8 1 12 403 414 403 415 0.92 9 20 5.1e-06 0.055 13.8 15.7 1 18 428 445 428 446 0.97 10 20 7.6e-07 0.0082 16.4 15.1 3 19 457 473 455 473 0.93 11 20 0.092 9.9e+02 0.2 5.6 10 19 522 531 520 531 0.89 12 20 2 2.2e+04 -4.7 6.0 3 11 541 549 534 550 0.75 13 20 0.65 7e+03 -2.5 5.8 14 19 578 583 578 583 0.90 14 20 0.01 1.1e+02 3.2 14.0 1 18 619 639 609 640 0.92 15 20 0.097 1e+03 0.1 16.5 3 19 652 668 651 668 0.91 16 20 1.9 2.1e+04 -4.1 1.4 8 13 673 678 672 678 0.72 17 20 1.7 1.9e+04 -3.9 1.6 6 10 703 707 702 707 0.86 18 20 2.5e-05 0.27 11.5 9.7 1 16 713 727 713 732 0.91 19 20 2 2.2e+04 -4.3 0.9 6 10 762 766 762 766 0.94 20 20 2 2.2e+04 -7.3 4.5 1 6 828 833 828 834 0.57
Sequence Information
- Coding Sequence
- atGGCTGATAGAAATTCAAAGGatccatggaaaaaaaatcaatggggAAAAGGCAAGAATATTGGTACCTCTGCTCTAGACCGCCATGttacaaaatcatcaatacaTAATGCTGAGACTAGATTTAAAGAAGCCAGTGAAAAATTACAGGCATCAGCTCAAAAACACATTCAGCATTATGAGTCCTCGTCTGATGAAGAGGACCTGGAAAAAGATAATATTCTCGAaggtgtattgggaaaatatgttaCAGATGATAAAGAGTTTAATTTAGGAAGAACAAAAGATTTTCTTACTGTTATTTGTCTTATTTGTATTGAATCTGTTAAAAGAAATCAACCCatatggAATTGTTCAACATGCTTCAATGGATTTCATCTACTTTGCATACAACGGTGGGCAAATGATACAATTTATCaacagaatttaattaaatcgcCAACACTCTCAGGTCTTCCGGTTCGAGATAATACTTTTAAGGAAGTTGTGTGGTGCTGCCCTAAGTGCAGATGTCAATACAATcaggaCAAAGTTCCGAAAACATATGAATGTTTctgtaaaaaacaacaaaacccTGAAATCCAACCATGGCTAGTTCCTCACTCTTGTGGAGCAATCTGTAATAAACCTTTAACTCCTGAATGTGGTGATTTGTGTCTATTATTATGTCATCCAGGCCCCTGTCCACCATGTCCAAAATTGGTCCACATATCCTGTAACTGCAAGAAAAGCTCAACTAAACCAGTTAGATGTAGTGTTGGTAATTGGAGTTGTAACAAGATATGCGATAAACTCTTATGCTGTAATATCCACGAGTGCGATAAGACCTGTCATCCCGGCGAATGCCAGCCCTGCTCCAAAATAAGATTACAAAAATGTCTTTGCAAGAAGAAGTCTGAAAATGTTCCTTGCGCCAAGCTAACTTGGCAGTGTGATAACatTTGTGGCAAACTATTTTCATGTGGTTATCATAGATGTGACAGACTATGTCACGATTTAAATTGTGGTCCATGCCCATTCACTGGATCACAAAAATGTCCATGTGGGTCGACAATAAAAGATGTTACTTGCCCTGATAAGGTAACCTCGTGTGGAGGTACCTGTAATAAAGAACTGCTTTGTGGAATTCATCAATGCCCACTTAAATGCCATCTTTCACCAGAAAAATGTTCTGAGTGTCAAGTGTTTGTTGAAAAGTCATGTCGTTGCGGAAGTCATGTCAAAGAATTGCCATGCCATAAGGAATTTTTATGCCAGACAAAGTGCAAGAATATGAAGGAATGTGGTCGCCATCCATGTAATAAGAAATGCTGTGACGGAGACTGCTCGACCTGTAATAAGATTTGTGAAAAAACTCTGCAATGTAAGAAGCATAAATGCCCTTCAGCTTGTCACACTGGTCCTTGTTACCCTTGCCCATTGCAAGTGAAAGTGACATGTTTCTGTGGGAATACTTATTTCAATGTTCCTTGTGGTAGACAGAGACGAACGAAACCACCAAAGTGCTCCCGTAACTGCAGGATTCCCGCTACTTGCAATCATGTTAAAGAGAATGTTCACTCATGTCATTTTGATGCTTGTCCTCCTTGTAAACAAACTTGTGGAAAACTGCTATCTTGTAAGCATATTTGTTATGCGCAGTGCCACAATGCTGTTCAAGTAGTTGTACCTGCTCCTAAGGCTACCGGGCCCTGGGATCTACTAGCTccaaagATTGAAGTCAAAGCTCTTCCGTGCCCACCCTGCAAAGTACCAGTTGTGTGTTCTTGCTTGGGACGACATGAAGAATCAAAATGGCCATGTAGCACAGCAAAGGTATCTTCATGTGGAAGGATATGTGGTCAGCTACTGCCTTGCACCAACCATGCCTGCTCCCGAGAATGCCACAATATTGCGCCTGGAAACTGTGAAAATTGTGAACGTCAATGTGAACTGTCAAGGCCAGAAGGCTGTACTCATCCGTGTACAAAACAATGCCATCCATCACCATGTGATGAGTGCCAACAATTTTTGAAGCGGTCATGTCACTGTGGCTTAACTGAActgtttattaaatgttttgctCTCACAAGTTCAGACTCAACTGTCAAAGAACAACATCTCTCGTGCCAACAGCGATGTATCAAACTGTTAAAATGTGGACATAGGTGTAGTACTATCTGCCATTCAGGAGTATGTACTGTCAAAATCTGTCAGAGTAAAACCAGAATGTATTGCGCATGTCGCCGTATCAAGAAAGATATTGCTTGCAATTTGATATCAAAAAATGAGCCCAATGTTCATTGTGATGaactatgtgaaaaaaaaatgcaggagGAATTATtgatcaaagaagaagaaataagGAGAAAAAAACTCGAAGAGGATGAAAAGAATCGCATCGAAATTGCAAAATATGAAAGCAAGTTTGGAAAGAAAATTCCAAAGAATAGAGAAAAACGGTCTGTCACTAAGCAAGAAACAAATTTCTTCTTAAAATAttgctgcgagCACGCGTGTCCCTACAGGGGTGTGAAAACTCCCATGCATTTATCCCAAGTTGGCGCTCACCCCTATTag
- Protein Sequence
- MADRNSKDPWKKNQWGKGKNIGTSALDRHVTKSSIHNAETRFKEASEKLQASAQKHIQHYESSSDEEDLEKDNILEGVLGKYVTDDKEFNLGRTKDFLTVICLICIESVKRNQPIWNCSTCFNGFHLLCIQRWANDTIYQQNLIKSPTLSGLPVRDNTFKEVVWCCPKCRCQYNQDKVPKTYECFCKKQQNPEIQPWLVPHSCGAICNKPLTPECGDLCLLLCHPGPCPPCPKLVHISCNCKKSSTKPVRCSVGNWSCNKICDKLLCCNIHECDKTCHPGECQPCSKIRLQKCLCKKKSENVPCAKLTWQCDNICGKLFSCGYHRCDRLCHDLNCGPCPFTGSQKCPCGSTIKDVTCPDKVTSCGGTCNKELLCGIHQCPLKCHLSPEKCSECQVFVEKSCRCGSHVKELPCHKEFLCQTKCKNMKECGRHPCNKKCCDGDCSTCNKICEKTLQCKKHKCPSACHTGPCYPCPLQVKVTCFCGNTYFNVPCGRQRRTKPPKCSRNCRIPATCNHVKENVHSCHFDACPPCKQTCGKLLSCKHICYAQCHNAVQVVVPAPKATGPWDLLAPKIEVKALPCPPCKVPVVCSCLGRHEESKWPCSTAKVSSCGRICGQLLPCTNHACSRECHNIAPGNCENCERQCELSRPEGCTHPCTKQCHPSPCDECQQFLKRSCHCGLTELFIKCFALTSSDSTVKEQHLSCQQRCIKLLKCGHRCSTICHSGVCTVKICQSKTRMYCACRRIKKDIACNLISKNEPNVHCDELCEKKMQEELLIKEEEIRRKKLEEDEKNRIEIAKYESKFGKKIPKNREKRSVTKQETNFFLKYCCEHACPYRGVKTPMHLSQVGAHPY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00800683; iTF_00801491;
- 90% Identity
- iTF_00801491;
- 80% Identity
- -