Hkul005251.1
Basic Information
- Insect
- Himalopsyche kuldschensis
- Gene Symbol
- -
- Assembly
- GCA_028554975.1
- Location
- JAHFWI010000006.1:21139197-21145088[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.11 8.5 7.7 3.1 1 23 1065 1088 1065 1088 0.92 2 12 1.6 1.2e+02 4.1 2.2 1 23 1181 1203 1181 1203 0.98 3 12 8e-06 0.0006 20.7 0.9 2 23 1206 1227 1205 1227 0.96 4 12 0.00056 0.042 14.9 2.2 1 23 1233 1255 1233 1255 0.98 5 12 0.00031 0.023 15.7 5.5 2 23 1262 1283 1261 1284 0.95 6 12 1.2 86 4.5 4.4 5 23 1297 1315 1294 1315 0.95 7 12 1.1e-05 0.00082 20.3 1.7 3 23 1322 1343 1321 1343 0.97 8 12 0.12 9.2 7.6 0.1 2 23 1359 1379 1358 1379 0.97 9 12 0.00012 0.0087 17.1 1.2 1 20 1385 1404 1385 1407 0.92 10 12 0.0075 0.56 11.4 0.1 1 23 1415 1437 1415 1437 0.98 11 12 9.5e-05 0.0071 17.4 1.0 1 23 1471 1495 1471 1495 0.95 12 12 0.00081 0.06 14.4 4.5 1 23 1501 1523 1501 1524 0.96
Sequence Information
- Coding Sequence
- ATGGACCAGTGTCCCGTGTGCACTCTGTACCTACGCGAGGGCATGTCCCTCGGCGCCCATCTGGACACTCATCCCAAAGACCAGGTGATTAGAGCGCTCTGCAGCATTGCCAAGGGCAGCCGCCGTGGCACTCCGTATGACAGTGGTCGATCGGAGGGATCATTTCGAAGTCGTTCGCGGACACCCGCGTGTGATTCTGGGCGTCATCGACGCCGTTCGACGCGAGCCTCTCCAGCTCCAGGCGGCTCCTACCGATCTCTTGAGTCGGCTGACAGCTCCCCCGAGGCGCGCTTTACAGCGGAGGCTGATGGATTTAGCAGTACACGACGGACACTGGAGCCCGCCAGAGTGGTCTCCACTCCTTCGCTGCATGCAGACTCGAGCTATTCAGAGAGTCCGGCGGTGAGTGCGCCACCGCCAGAATCCCTGGAGCGGGTATATCTGGTGTCTAGGAATTCTGCCGAGGCCGATGTTTCCGCCGGAAGCTTCAGCCGGCAGCCTGATTACCTTTTCTGTAATGAAAGAAGCGGCGGTGACAGTGTTGAGAGCACTCCAGTTACCTTTGCACAGCCCAGAGCGTCAGCGAGAGCTTCACCTTGTGAAACGGCAAAGTCTGGAGCTTCCAAGGATAGACCTGAGGTGGACCCCCCTCCCGCTCTGCATTACGTCACCACTAATCTGAATCCTGTACATTTTGTTCTCCCCGCATCTCCCTCTTTCTCTCGTCAGCCTGATAATATGGTTGTGGCTGTGCCGCCGCCGACTGATGTGCCTCGCGTCGGTGATACGGCGTCGACAGCTTTTCCTGGCCGTTTCACCCCACTGTCTTCGGTGTCTTTTCGTCGTCCAGGGCCTACGATCACGCAAGCTCCTCAGATTGTCTACAGGGAATCTTCATATGTGAATGGTAAACAGTTTCTTTCTGCTGTCCCCGCCGTTGGGTCTGATCACAGGGAGATGAACGCTAAGCCTGCCATGTACCGAAATGTCATGGTTTTCAACCCTTTCTCGGGCGCCTCCTGCCTCTCTCCGCAACAGCCGGCCCAGGAAGTCCGGGACCTCAGACACCAGGTTCCCGCTCTTCTCCTTGGCCTTTCAAGGTTGGAAGTGCAGGTTGCGAATTCCATTCTTCCTGAGAAATCTCAGTCAGTTAACAATGATGACTGCGCTATCCTGAACCGTAAAAGTTTTACCGGGGATGGGATCAAACCGAAAGGATCGGAAAACACTTCCATCATCGAAGAAGTTCCAATGGATTCTGGCCTCTTTGCCGATTGGGGAGACGTTGTCGACTTCGGTGACGCCTCAGCGAAAAACTCCGGGGTAAAAATATTGAGCAATATTAAAGTTGAATTACCAGTGCAAAATAGTGGACCAGTCGGGGAGTCTGTTGACTTGACTCTAGGACGAGACCACAGATCCCGTCCAGACATCAACGCGCCCGATCTGAATACCGACGAAGCCACTCTTCCAGACTTCATTGACCGCGAGATATGTGATTCTTACGATCGCAGTAGATTTTATCGTCAAGAAAGTTTTTGTCCTTCAGATAATGCCAGACGCATCGGAGAAGGGGAGCCTTCGACTCCTCGGATGATATCGATTGCGAACACCTTTTCCGTTATTAAAAACATTGGTAATCCTAATTTATACAAAGACGGCTCAGCGAATGTGGCGCAGCACTCTGATGAGCCGGAACCTTGCGCTCTGCCTGATCTGACGTGCAATGAAAAGCCTTCTGTTTCGCCGTGCAGTGATCTCACTAACGATTCAAACGAAGGGTCTTACGATCGGCTCGGACGGGCCCCTGAAACTTCAGGACACCCTCCGAGACGAACAGGTCTCGTTCCTACCCGGTTTCCCTCATCACCGGTGGTCACGAGAAGCACTACGAGGAAAAATTTATTCGTCAAAAAACCAAAGAAAATATTACGCATAAAAAATTTGAATAAACGAGACACAAAAAAGGCTTCTGAAAATGCAACCGGTGATCTTTTGGACTCCGGAGAAGGAACTTCTGATGGAGCAGGCATGTCTTTAGCTGGCCACAGTCGAACCGGTGGCTTTTTCAAAGAAATAGATAAAATTAGGAATAACTCCTCTACTCTTTCAATGGTCGCTGTTGAATCTCATTCACGAACAGGCGTCGAGATATACACCGAACCTCCCGGGGATGATTCAATGAGTTTCATCATTGACAAGAGAGAACCCTCTGGCGATGACGAATCAAAAAATTCTTCACAATTCGAAGGAAGCTTCTCTGCGACGCCGGCGACAGGAGAAGACATCCTGAAAGCAATCCTCGAGGAGGGCGCTCCGTCCCGCGGAGATGGTGATTTGGAAGCCGTAAGGCCTGTGAATGTCATCGCATTCGGCGCTATGTTGAGTGGCGACTCTGCTGTAGTGAGTCTTGCCGGTGTTTCTTCCAAAATGACCCAGGAATCGAACCGTTTCACTATAGAAAAACGAACCTCCAATGATCTCATACGAGAATCATACGCAGAGTTTTTCTCTGCTGACAGAGAATCTTTCGGAGACGGGGTGGCAGATGGTGTCCAGAAAATAGAAGTGTGCATAGTCGAAGAAGATGTCACGAAAGATGGCGAATATGTCTGGGACGAGACGCCCCAGAAAGAAGAATTCGCCTTCGCCAACTTCATGCGGGGCGACTATTCCCAGGCTATGTATACAAGGACCGATGGTGGAGAGGGAAAAGGAAACGACCTCGGCGGACCGGAAGGTCAACGGGTACCCGGTCACTTTTCCGCAGAAGACATCTGCGGAGATGACGGTGATTATGTGGAGTTGCTTTGCCCCCAAGACGCTTTTCTCGATCGGGACCACAAAGGATCTTTTTTGGAAGCCGTCACGTCGGGAGGATGTCTCGGAACCGGGGCAGACATCGATGGCAGCGGGCACGCAGGAGAGGCGGCGGCCTTGAACATACGGACAGACGAGCGCATGCCACCCAGAGGAGAGCTATCTGAACAGGATAGTAGCGGTGATGTGGACGCACCTTGGGCTGGGATGTATCATGATGTTGTCGGGGGCTCAACATCTTACGACTTAATAGCCAGAGAGTCTTGGCCCTCCGATGGATCCGACATAGACATGCCCATCTCTCCGACCAAACATGCTTTTGAGACGGAGGATATCCCGATAGTAGTCGGCGTGAAGCCTCCCGATAAGAACTACAAATGTGCAACGTGCGGAAAGAGCTTCAACTGTCCCAAAGAGAGGCGAGTGCATCGCAGCAAAGAACACCCGGTCGCAGCCGTCCCTGGCGATTCGGTCGATGTCAAAAAGCCTGTCAGAAAAAAGAGACCGCCTTCGGTGAAAACGAATATCAAAATAAAGAGCGAGAAGGTCGTCAAAAACGAGGGACTCTCCTCTCTCTCCAATTCTAAGATGGATCTCACCGACGAGGGAGTGATGAATTTAAAATTGGTGGACGGAGTGCTGACGCCCGATCTGGATGCCATCGACAGCAAACCCAAACTCGAGCTTGTCAAGGAAGAAACCAAGAAGAGAAAGAGGGAGTACACCTGCGTCACTTGCAAATTGGAATTCTTCACCGACATCTCCTACCACGAGCACCTCAAGATTCACCCGCTGGAGTGTTTGACCTGCGGCAAGTTCTTCAACCGGAGGGCTAACCTGCAACTGCATATCAAAAGACATTTAGGAATAAAAAATTTCAGGTGTGACGTGTGTGACAAACGATTCATCACAAAGCAAAAGATGGCCGAGCACCACAATATACACGTTCTTTGCGCTCCTATAAAGTGCAACATGTGCGATGAGACTTTCCGGCGACACTCCAATATGGTGCAGCACCGGAACCGTCACCACCTTCGCCTCAAAAGGCGTCCCCGGGACCACGTCTGCCACTGCGGCGAAGTCTTCCACTCCAAGAAGAAACTGCTCTGGCACAAAGAGGTTCACGAAGAGAAGCCCAAGGCCTGCCCGCACTGCAGCGAGAGATTCGTTCACGCGGCCTCTCTCACCAGACACATGCGCCGGGCGCACAACAATTACTACGTTCCGGATGAAAGGCGGAAGAGGGAAAATGTTCAGTGCCCCGTGTGCGGCAACGTCTACCTGAAATCTTCTATGGACATGCATCTGCGCACGCACACGGGGGCCAAGCCTTTCTCGTGCGTTATCTGCTCCAAAAGTTTCTCCACCAAGTGGAACCTCAAGCTGCACCGGTGGACGCACGCTAACCGTTCCAGCAAGCCTTTCAAGTGCGCTCTCTGCAAAGGGGCGTTTGTCCGTCGAGCCGACTACGTGTCGCACATGAATGCTCACCGTTCCGTGCGGCCGTACACGTGTAACCACCGCGGCTGCCGCTTCATCCGAAAGTACAACTGCCAGCGGCACGTGCGGGAGCACGAGACCGCCAAACGCCACGCGTGCCCGGtgcccgactgtggcaagactttccaccgcggatactatctttccgagcacatgcgtgtccattcgggcgcccgacccttctcctgcaacatctgcggcaaagCCTCCTCAACCAAATCTAATCACAACAAACATTTGAAGATACACCACGCCAAGGAGCCCGTGGCCCGCGAAGATTAA
- Protein Sequence
- MDQCPVCTLYLREGMSLGAHLDTHPKDQVIRALCSIAKGSRRGTPYDSGRSEGSFRSRSRTPACDSGRHRRRSTRASPAPGGSYRSLESADSSPEARFTAEADGFSSTRRTLEPARVVSTPSLHADSSYSESPAVSAPPPESLERVYLVSRNSAEADVSAGSFSRQPDYLFCNERSGGDSVESTPVTFAQPRASARASPCETAKSGASKDRPEVDPPPALHYVTTNLNPVHFVLPASPSFSRQPDNMVVAVPPPTDVPRVGDTASTAFPGRFTPLSSVSFRRPGPTITQAPQIVYRESSYVNGKQFLSAVPAVGSDHREMNAKPAMYRNVMVFNPFSGASCLSPQQPAQEVRDLRHQVPALLLGLSRLEVQVANSILPEKSQSVNNDDCAILNRKSFTGDGIKPKGSENTSIIEEVPMDSGLFADWGDVVDFGDASAKNSGVKILSNIKVELPVQNSGPVGESVDLTLGRDHRSRPDINAPDLNTDEATLPDFIDREICDSYDRSRFYRQESFCPSDNARRIGEGEPSTPRMISIANTFSVIKNIGNPNLYKDGSANVAQHSDEPEPCALPDLTCNEKPSVSPCSDLTNDSNEGSYDRLGRAPETSGHPPRRTGLVPTRFPSSPVVTRSTTRKNLFVKKPKKILRIKNLNKRDTKKASENATGDLLDSGEGTSDGAGMSLAGHSRTGGFFKEIDKIRNNSSTLSMVAVESHSRTGVEIYTEPPGDDSMSFIIDKREPSGDDESKNSSQFEGSFSATPATGEDILKAILEEGAPSRGDGDLEAVRPVNVIAFGAMLSGDSAVVSLAGVSSKMTQESNRFTIEKRTSNDLIRESYAEFFSADRESFGDGVADGVQKIEVCIVEEDVTKDGEYVWDETPQKEEFAFANFMRGDYSQAMYTRTDGGEGKGNDLGGPEGQRVPGHFSAEDICGDDGDYVELLCPQDAFLDRDHKGSFLEAVTSGGCLGTGADIDGSGHAGEAAALNIRTDERMPPRGELSEQDSSGDVDAPWAGMYHDVVGGSTSYDLIARESWPSDGSDIDMPISPTKHAFETEDIPIVVGVKPPDKNYKCATCGKSFNCPKERRVHRSKEHPVAAVPGDSVDVKKPVRKKRPPSVKTNIKIKSEKVVKNEGLSSLSNSKMDLTDEGVMNLKLVDGVLTPDLDAIDSKPKLELVKEETKKRKREYTCVTCKLEFFTDISYHEHLKIHPLECLTCGKFFNRRANLQLHIKRHLGIKNFRCDVCDKRFITKQKMAEHHNIHVLCAPIKCNMCDETFRRHSNMVQHRNRHHLRLKRRPRDHVCHCGEVFHSKKKLLWHKEVHEEKPKACPHCSERFVHAASLTRHMRRAHNNYYVPDERRKRENVQCPVCGNVYLKSSMDMHLRTHTGAKPFSCVICSKSFSTKWNLKLHRWTHANRSSKPFKCALCKGAFVRRADYVSHMNAHRSVRPYTCNHRGCRFIRKYNCQRHVREHETAKRHACPVPDCGKTFHRGYYLSEHMRVHSGARPFSCNICGKASSTKSNHNKHLKIHHAKEPVARED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00800420; iTF_00799534;
- 90% Identity
- iTF_00800420; iTF_00799534;
- 80% Identity
- -