Hano014122.1
Basic Information
- Insect
- Himalopsyche anomala
- Gene Symbol
- -
- Assembly
- GCA_031772345.1
- Location
- CM062836.1:24272191-24281599[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.14 6.5 7.7 3.1 1 23 1060 1083 1060 1083 0.92 2 13 1.9 91 4.1 2.2 1 23 1176 1198 1176 1198 0.98 3 13 9.7e-06 0.00046 20.7 0.9 2 23 1201 1222 1200 1222 0.96 4 13 0.00068 0.032 14.9 2.2 1 23 1228 1250 1228 1250 0.98 5 13 0.00038 0.018 15.7 5.5 2 23 1257 1278 1256 1279 0.95 6 13 1.4 66 4.5 4.4 5 23 1292 1310 1289 1310 0.95 7 13 1.3e-05 0.00063 20.3 1.7 3 23 1317 1338 1316 1338 0.97 8 13 0.15 7 7.6 0.1 2 23 1354 1374 1353 1374 0.97 9 13 0.00014 0.0067 17.1 1.2 1 20 1380 1399 1380 1402 0.92 10 13 0.0091 0.43 11.4 0.1 1 23 1410 1432 1410 1432 0.98 11 13 0.014 0.66 10.8 9.4 1 23 1438 1460 1438 1460 0.98 12 13 0.00012 0.0055 17.4 1.0 1 23 1466 1490 1466 1490 0.95 13 13 0.00097 0.046 14.4 4.5 1 23 1496 1518 1496 1519 0.96
Sequence Information
- Coding Sequence
- ATGGATCAGTGCCCCGTGTGCACCCTGTATCTCCGTGAGGGCATGTCCCTCGGCGCCCATCTGGACACTCATCCCAAAGACCAGGTGATAAGAGCGCTCTGCAGCATTGCCAAAGGCAGTCGCCGCGGCACTCCATACGACAGTGGTCGATCCGAGGGATCTTTTCGAAGCCGCTCACGGACACCCGCATGTGACTCTGGGCGTCATCGGCGCCGTTCGACGCGAGCCTCTCCTGCTCCAGGGGGCTCATACCGTTCTCTTGAGTCGGCGGACAGCTCCCCCGAGGCACGCTTCACAGCTGATGGTGATGGATTTAGCGGAACGCGCCGAACTCTGGAGCCTGCCAGGGTGGTCTCCACTCCTTCATTGCATGCAGACTCAAGCTACTCAGAGAGTCCGGTGGTGAGTGCGCCACCGCCTGAATCCCTCGAGCGGATCTATTTGGTGTCTAGGAATTCTGCCGAGGCGGATGTTTCCACCGGAAGCTTCAACCGACAGCCCGATTACCTTTTCTGTAATGAAAGAAGTGGGGGCGACAGTGTAGAGAGCGCTCCAGTGTCCTTTGCCCAGCCCAGAGCATCGGCAAGAGTTTCACCGTGTGACATAGCAAAGTCGGGAACTTCCAAAGATAGACCTGAGGTGGAACCCCCTCCTGCTCTGCACTACGTCACTACTAATTTGAATCCTGTACATTTTGTTCTCCCCGCATCTCCCTCGTTCTCTCGTCAGCCAGATAATATAGTCATGACCGTGCCCCCGACTGATGTGCCCTGCCTTGGTGATACAGTATCGACAGCATTTCCTGGGCGTTTCACCCCTCTCTCTTCGGTCTCTTTCCGTCGCCCAGGGCCTACAGTCACACAAGCTCCTCAGATTGTCTACAGAGAATCTTCATATGTGAATGGAAAACAGTTCCTTTCTGCCGTCCCTGCTGTTGGGACCGATCACAGGGAGATAAGTGCCAAGCCAGGTGCTGTATACCGAAACGTCATGGTGTTTAATCCTTTCTCAGGCGGCTCCTGCCTCTATCCTCAGCAGCCGACCCAGGAAGTCCGTGATCTCAGACACCAGGTTCCCGCTCTTCTCCTTGATGGCTCGGCTAGGTTAGATGTGCAAGTTGCAAATGCCATTCTTCCTGAGAAATCTCAGTCTGTTAATAATGAAGACTGCGCTCTGTTGAACCATAACAAATTTACTGGCGACGGGGTCAAACCGAAAGCTTCCGAGGACGTTTCAATCATCGAAGATGTTCCGATAGATTCTGGTCTCTTTGTTGATTGGGGAGATGTTGATTTCGGTGATGCCTCAGCGAAGAACTCTGGGGTAAAAATATTGAGCAATATTAAAGTTGAATTGCCAGTGCAAAATAGCGGACCGATTGCAGAGTCTGTTGACTTGACTCTGGGACGAGATCACAGATCCCGTACAGACATCAGCGCGCCTGATCTGAATACTGATGAAGCTACTCTGCCAGACTTTATCGACAGAGAGATATGTGATTCTTATGATCGCAGTAGATTTTATCGCCAAGAAAGTTTTTGTCCTTTGGACAATGCTCGGCGCGTAGGAGAGGTGGAGCCTTCGACTCCTCGGTTGATTTCGATCGCGAACACGTTTTCTGTTATAAAAAACATTGGTAATCCTAATTTATACAAAGACGGCTCCACAAGTGCTGCGCATCATTCAGAGGAACCGGAACCCTGTGTTCTGCCTGATTTAACATGCAATGAAAAACCTTCTGTTTCGCCATGCAGTGATCTCACCAACGATTCTAACGAAGGGTCTTACGACCGGCTAGGGCAGGCGGCGGAAACTTCAGGACATCCATCGAGACGGACAGGTCTCGTACCTGCCCGGTTTTCTTCATCACCTGTAGTCACGAGAAGTACTACAAGAAAAAATTTATTCGTCAAAAAACCAAAGAAAATATTAcgcattaaaaatttgaataaaagagaCACAAAAAAGTCCTCTGAAAAAGCAGCAGTCAATCTTTTAGACTCCGGAGAGGGAACTTCTGATGGTGCGGGTTTGTCTTCGGCTGGCCACAGTAGAACTGGTggctttttcaaagaaatagaTAAAATTAGGAAAAACTCCACTCTTTCAATGGTTGCTGTTGAAACTCATTCGCGAACAGTCGGCGAGATATACACTGAACCCCCCGGGGATGATTCGATGAGTTTCATCATTGACAAAAGGGAACCCTCCGGTGATGACGAATCAAAAAATTCCTCACACTTCGAAGGAAGCTTCTCCGCGACTCCAACGTCGGGAGAAGATATCCTGAAAGCGATCCTCGAGGAGGGCGTCCCGTCCCGAGCAGATGGAGATTTGGAGGCCGTACGGCCTGTGAATGTCATCGCATTCGGCGCAATGTTGAGTGGCGATTCTGTTGCCGGTGTATCTTCTAAGACCTCTCAAGATCCTAACCGTTTCACTGTAGAAAAGCGAACGTCCAACGAACTCATACGAGAGTCATACGCAGAGTTCTTCTCTGCTGATAGAGAATCTTTCGGGGACAGTGTAGCGGACGGTGTTCAGAAAATAGAGGTGTGCATAGTCGAAGAAGACGTTACAAAGGATGGCGACTATGTCTGGGACGAGACACCGCAGAAGGAAGAGTTCGCCTTCGCTAACTTTATGCGGGGTGACTATTCCCAGGCTATGTACACGAGGACAGACGGAGGAGAAGGAAAAGGAAGCAACCTCGGCGGGCCGGAAGGTCAACGGGTACCCGGTCACTTTTCTGCGGAAGACATCTGCGGAGACGAAGGCGAATATGTGGAGTTGCTATGTCCTCAAGACGCTTTCCTCGATAGGGATCACAAAGGATCTTTTTTGGAAGCGGTCACATCGGGGGGATGTCTCGGAACCGGGGCAGACATGGAAGGCAGCGGACATGCAGGAGAGGCGGCAGCCTTAAACATACGGACAGATGAGCGCATGCCACCCAGAGGAGAGCTTTCTGAACAAGATAGTAGTGGTGATGTGGACGCACCTTGGGCCGGGATGTATCATGATGTCGTTGGAGGTTCTACATCTTATGACTTAATAGCCAGAGAGACTTGGCCTTCCGATGGATCTGACATAGACATGCCAATTTCTCCGACAAAACATGCTTTTGAGACTGAGGACATCCCGATAGTGGTCGGCGTAAAGCCTCCCGATAAGAACTACAAATGTGCAACATGCGGAAAGAGCTTCAACTGTCCCAAAGAGAGGCGGGTGCATCGGAGCAAAGAACACCCCGTCGCAGCCGTCCCGGGTGATTCGGCCGATATCAAAAAAACCGTCAGAAAAAGGAGACCGCCTTTAGTgaaaacaaatatcaaaataaaaagcgAGAAGGTTGTCAAAAACGAGGGACTCTCGTCTCTCTCGAATTCTAAAATGGATCTCACCGACGAGGGAGTGATGAATTTGAAATTGGTGGACGGAGTGCTGACGCCCGATATGGACGCCGTCGACAACAAACCCAAACTCGAACTCGTCAAGGAAGAGACCAAAAAAAGAAAGAGAGAGTACACGTGCGTCACTTGCAAATTGGAGTTCTTCACCGACATCTCCTACCACGAGCATCTCAAGATTCACCCGCTGGAGTGTTTGACCTGCGGCAAGTTCTTCAACCGGAGGGCCAATCTGCAACTGCATATCAAAAGACATTTAGGAATAAAAAATTTCAGGTGTGACGTGTGTGACAAACGATTCATCACAAAGCAAAAAATGGCCGAGCACCACAACATCCATGTTCTTTGCGCTCCCATAAAGTGCAACATGTGCGATGAGACTTTCCGGCGACACTCAAACATGGTGCAGCACCGGAACCGTCACCACCTTCGCCTGAAGAGGCGTCCTCGGGACCACGTCTGCCACTGCGGCGAAGTCTTCCACTCCAAGAAGAAGCTGCTCTGGCATAAGGAGGTGCACGAGGAGAAGCCTAAGGCCTGCCCGCACTGCAGCGAGAGATTTGTCCACGCTGCCTCTCTCACCAGACACATGCGCCGGGCGCACAACAACTACTACGTACCGGATGAGAGGCGGAAGAGGGAAAACGTGCAGTGCCCCGTGTGCGGCAACGTCTACCTCAAGTCCTCCATGGACATGCACCTGCGCACCCACACCGGTGCCAAGCCCTTCTCGTGCGTCATCTGCTCGAAAAGTTTCTCCACCAAGTGGAACCTCAAGCTGCACAGGTGGACGCATGCCAACCGCTCCAGCAAACCTTTCAAGTGCGCCCTCTGCAAAGGGGCGTTCGTCCGCCGAGCCGACTACGTGTCGCACATGAACGCTCACCGTTCCGTGCGGCCGTACACGTGTAACCACTGCGGCTGCCGCTTCATCCGGAAGTACAACTGCCAGCGGCACGTGCGGGAGCACGAGACCGCCAAGCGTCACGCCTGCCCCGTGCCCGACTGCGGAAAGACCTTCCACCGCGGATACTATCTCTCCGAGCACATGCGCGTCCACTCGGGCGCCCGCCCCTTCTCCTGCAACATATGCGGCAAAGCCTCCTCTACCAAATCCAATCACAACAAACATTTGAAGATACACCACGCCAAGGAGCCCGTGGCCCGCGAAGATTAA
- Protein Sequence
- MDQCPVCTLYLREGMSLGAHLDTHPKDQVIRALCSIAKGSRRGTPYDSGRSEGSFRSRSRTPACDSGRHRRRSTRASPAPGGSYRSLESADSSPEARFTADGDGFSGTRRTLEPARVVSTPSLHADSSYSESPVVSAPPPESLERIYLVSRNSAEADVSTGSFNRQPDYLFCNERSGGDSVESAPVSFAQPRASARVSPCDIAKSGTSKDRPEVEPPPALHYVTTNLNPVHFVLPASPSFSRQPDNIVMTVPPTDVPCLGDTVSTAFPGRFTPLSSVSFRRPGPTVTQAPQIVYRESSYVNGKQFLSAVPAVGTDHREISAKPGAVYRNVMVFNPFSGGSCLYPQQPTQEVRDLRHQVPALLLDGSARLDVQVANAILPEKSQSVNNEDCALLNHNKFTGDGVKPKASEDVSIIEDVPIDSGLFVDWGDVDFGDASAKNSGVKILSNIKVELPVQNSGPIAESVDLTLGRDHRSRTDISAPDLNTDEATLPDFIDREICDSYDRSRFYRQESFCPLDNARRVGEVEPSTPRLISIANTFSVIKNIGNPNLYKDGSTSAAHHSEEPEPCVLPDLTCNEKPSVSPCSDLTNDSNEGSYDRLGQAAETSGHPSRRTGLVPARFSSSPVVTRSTTRKNLFVKKPKKILRIKNLNKRDTKKSSEKAAVNLLDSGEGTSDGAGLSSAGHSRTGGFFKEIDKIRKNSTLSMVAVETHSRTVGEIYTEPPGDDSMSFIIDKREPSGDDESKNSSHFEGSFSATPTSGEDILKAILEEGVPSRADGDLEAVRPVNVIAFGAMLSGDSVAGVSSKTSQDPNRFTVEKRTSNELIRESYAEFFSADRESFGDSVADGVQKIEVCIVEEDVTKDGDYVWDETPQKEEFAFANFMRGDYSQAMYTRTDGGEGKGSNLGGPEGQRVPGHFSAEDICGDEGEYVELLCPQDAFLDRDHKGSFLEAVTSGGCLGTGADMEGSGHAGEAAALNIRTDERMPPRGELSEQDSSGDVDAPWAGMYHDVVGGSTSYDLIARETWPSDGSDIDMPISPTKHAFETEDIPIVVGVKPPDKNYKCATCGKSFNCPKERRVHRSKEHPVAAVPGDSADIKKTVRKRRPPLVKTNIKIKSEKVVKNEGLSSLSNSKMDLTDEGVMNLKLVDGVLTPDMDAVDNKPKLELVKEETKKRKREYTCVTCKLEFFTDISYHEHLKIHPLECLTCGKFFNRRANLQLHIKRHLGIKNFRCDVCDKRFITKQKMAEHHNIHVLCAPIKCNMCDETFRRHSNMVQHRNRHHLRLKRRPRDHVCHCGEVFHSKKKLLWHKEVHEEKPKACPHCSERFVHAASLTRHMRRAHNNYYVPDERRKRENVQCPVCGNVYLKSSMDMHLRTHTGAKPFSCVICSKSFSTKWNLKLHRWTHANRSSKPFKCALCKGAFVRRADYVSHMNAHRSVRPYTCNHCGCRFIRKYNCQRHVREHETAKRHACPVPDCGKTFHRGYYLSEHMRVHSGARPFSCNICGKASSTKSNHNKHLKIHHAKEPVARED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00801238;
- 90% Identity
- iTF_00801238;
- 80% Identity
- -