Hkul027624.1
Basic Information
- Insect
- Himalopsyche kuldschensis
- Gene Symbol
- lrrfip2
- Assembly
- GCA_028554975.1
- Location
- JAHFWI010000007.1:2086978-2095575[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7e-95 2e-90 303.8 29.3 1 300 119 423 119 423 0.90 2 2 0.021 5.9e+02 0.1 5.0 122 172 423 473 421 482 0.88
Sequence Information
- Coding Sequence
- ATGAAGGACGTCGACGCCCATTTATCGTCTGATTTGGATCCGGCGGAACGAGCCGACGACAATTCAGACGATCAGCTAACCTCTGGTGATTTCGAAGAATCGTCGGACGAGGCCGACGCCGCCTTCTGTTCCGCAGACGAGACCCTGAAAGACGTTCCGTGTAACGAAGTTATAAACACTGATGTAAAGGCTTCGTTCGATGATGGCGTGGAGTTGAGGCAGAAAAAGGCCACCGCGGCCGTGGGATCGTTTTCGTCGTTGAGTGGCGAAGACGATCTCTTTAACGGGAGCAACGTTTCTAATGGAAATGACGACATCAGCATCGTTGGAATCCTTGGGAAGGATCATGACATAGCAGAAGCTCGCTTGGCAGCAAGGCGGCAGGCGAGGGCGGAAGCCAGAGACATTCGCATGCGGGAGCTCGAACGACAGCAGAAAGAACAGGAGGAAAATGCAGACCGAGCCTACTATATGCAGTCAGAGCCATTACAACGGAGCACCAGCGTGTCTGGAAGTGGTCCAGCTGCGGTCGCTCGCCTTTCGTCTACCACTTCAGCCACCGGCACACCCAATGCTCATTCCTCTCGTAGAAGTTCTCAAGATTCCGTTGAAGAGTTGGGCAGCATTAGGGATATAAGACAAGAACTCAAAGAAGTCGAAGAGAAATTTCGAAAGGCCATGATATTAAATGCCCAGTTGGATAACGATAAGGCATCTTTTTCTTACCAACTAGAACTTTTAAAAGACAAATTGGAAGACCTGCAGGAGCAATATACACAATTGCAGCGTGAACACAAAGACAAGTGTCGATCCCATGAAGCCCTCGTGCGAGAGTGTAGAGTTACAAAAGAAGAAGTGGAGAGATGCACAGCCGCAGTCGTCCTCCGCGACCGCTGCATTTTGGAAGCCGGTTTAGAACTAGTCGCCGTTCAATTGGCTGAAGGCGATACTGAAGGGGCCGGAGCCGCTCTCGTCTCCCGGGCCAGCAAAGAAGCTCTTGAAGCAGCTGGCCACGGGGCTCTAGATGTTCGGTTGCAAACATTATGCTCACAACGGCAAGCTCTGGAATCGGAAGTCAAGCAATTGAAAATGCAACTTGACAAAGAAAGGTCAAAAAAGGAAAACAACATTCACAATAACTCTTCTCAAAACGGTCCCGTTAATGGTTCAAATAGTGACTCCGATTCTATGGAAAATCATAGAGAAAATTCAAAACTAGTTGCCGATTACAAATTCGAAACGTCCAAAGCTGAACAAGACGTGCTGACATTGCAGGCTACAGTCGCTCGTTTAGAGAGTCAGGTGATCCGGTACAAGAGTGCCGTTGAGGAAGCCGAAAGAATGGAGGATGAACTTAAGTGCGATCGAAGAAAATTGCAGAGAGAGGCCCGTGAAGCGCAAAGCCGAGTTGAGGAATTGGAAACTGAAAATAACCATTTGAATAAACGTCTGGATAAATTAAAAACTGCTAAATCAGCTCTACTGAAAGAACTTTGA
- Protein Sequence
- MKDVDAHLSSDLDPAERADDNSDDQLTSGDFEESSDEADAAFCSADETLKDVPCNEVINTDVKASFDDGVELRQKKATAAVGSFSSLSGEDDLFNGSNVSNGNDDISIVGILGKDHDIAEARLAARRQARAEARDIRMRELERQQKEQEENADRAYYMQSEPLQRSTSVSGSGPAAVARLSSTTSATGTPNAHSSRRSSQDSVEELGSIRDIRQELKEVEEKFRKAMILNAQLDNDKASFSYQLELLKDKLEDLQEQYTQLQREHKDKCRSHEALVRECRVTKEEVERCTAAVVLRDRCILEAGLELVAVQLAEGDTEGAGAALVSRASKEALEAAGHGALDVRLQTLCSQRQALESEVKQLKMQLDKERSKKENNIHNNSSQNGPVNGSNSDSDSMENHRENSKLVADYKFETSKAEQDVLTLQATVARLESQVIRYKSAVEEAERMEDELKCDRRKLQREAREAQSRVEELETENNHLNKRLDKLKTAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00799275;
- 90% Identity
- iTF_00799275;
- 80% Identity
- -