Hano006283.1
Basic Information
- Insect
- Himalopsyche anomala
- Gene Symbol
- lrrfip2
- Assembly
- GCA_031772345.1
- Location
- CM062826.1:13247528-13261100[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-96 3.5e-92 309.2 28.0 1 300 114 418 114 418 0.89 2 2 0.035 7.6e+02 -0.6 6.2 122 172 418 468 415 492 0.69
Sequence Information
- Coding Sequence
- ATGGCGGACGTCGACGCCCATTCATCGTCCGATTTGGATCCGGCGGAGTCGGACGGCGAACTCACCTCTGGTGATTTCGGAGAAGTCTCTGACGAGGGCGATGCTGTGTTCTGTTCCACAAACGAGACACTAAAAGACATTCCTTGTAACGAAGTTATAAACACTGGTGTAGAGACTTCGTTCGATGGAGACGTGCAGTTGAGGCAGAAAAAGGCCACTTCGACCATCGGGTCGTATTCGTCGTTGAATGACGAAGACGAACTCTTTAATGTGACCAAAATTTCTAATGGAAATGACGACATCAGCATCGTTGGAATCCTTGGGAAGGATCATGGCATAGCAGAAGCTCGCTTGGCGGCAAGGCGGCAGGCGAGGGCGGAAGCCAGAGACATTCGCATGCGGGAGCTCGAACGACAGCAGAAAGAACAGGAGGAAAATGCAGACCGAGCTTACTATATGCAGTCAGAGCCATTACAACGGAGCACCCGCGTGTCTGGAAGCGGTCCAGCTGCGATCGCTCGTCTTTCCTCTACAACTTCAGCCTCCGGCACACCCAATGCTCATTCCTCTCGTAGAAGTTCACAAGATTCCGTTGAAGAGTTGGGCAGCATTAGGGATATAAGGCATGAACTCAAAGAGGTGGAAGAGAAATTTAGAAAGGCTATGATATTAAATGCACAGTTGGATAATGATAAGGCATCTTTTTCTTACCAACTGGAACTTTTAAAAGACAAATTGGAAGACCTGCAGGAGCAATATACACAATTGCAACGTGAACACAAAGACAAGTGTCGATCCCACGAAGCCCTGGTGCGAGAGTGTAGAGTTACAAAAGAAGAAGTGGAAAGATGTACAGCTGCAGTCGCTCTCCGCGACCGCTGCATTCTGGAAGCTGGCTTAGAACTAGTTGCCGTTCAATTGGCTGAAGGTGATACTGAAGGGGCTGGAGCCGCTCTCGTTTCCCGGGCCAGCAAAGAAGCTCTGGAAGCAGCTGGCCACGGGGCtttagATGTTCGGTTGCAAACATTATGCTCGCAACGGCAAGCTCTGGAATCGGAAGTCAAGCAGTTGAAAATCCAACTTGACGAAGAAaggtcaaaaaagaaaaataacattcacAATAACTCTTCCCATAATGGTCCCGTTAACGGTTCGGATAGTGACTCTGATTCTATGGAAAATCATAGAGAAAATTCAAAACTAGTTGCCGATTACAAATTCCGAGCGTCCAAAGCTGAACAAGACGTGCTGACATTGCAGGCTACCGTCGCTCGTTTAGAGAGTCAGGTGATCCGTTATAAGAGTGCCGTCGATGAAGCTGAAAGAATGGAGGATGAACTTAAGTGTGATCGAAGAAAATTGCAGAGAGAGgccCGGGAAGCGCAAAGCCGAGTCGAAGAATTGGAAACTGAAAATAACCATTTGAATAAACGTctggataaattaaaaactgctAAATCAGCTCTACTGAAAGAACTTTGA
- Protein Sequence
- MADVDAHSSSDLDPAESDGELTSGDFGEVSDEGDAVFCSTNETLKDIPCNEVINTGVETSFDGDVQLRQKKATSTIGSYSSLNDEDELFNVTKISNGNDDISIVGILGKDHGIAEARLAARRQARAEARDIRMRELERQQKEQEENADRAYYMQSEPLQRSTRVSGSGPAAIARLSSTTSASGTPNAHSSRRSSQDSVEELGSIRDIRHELKEVEEKFRKAMILNAQLDNDKASFSYQLELLKDKLEDLQEQYTQLQREHKDKCRSHEALVRECRVTKEEVERCTAAVALRDRCILEAGLELVAVQLAEGDTEGAGAALVSRASKEALEAAGHGALDVRLQTLCSQRQALESEVKQLKIQLDEERSKKKNNIHNNSSHNGPVNGSDSDSDSMENHRENSKLVADYKFRASKAEQDVLTLQATVARLESQVIRYKSAVDEAERMEDELKCDRRKLQREAREAQSRVEELETENNHLNKRLDKLKTAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00800975;
- 90% Identity
- iTF_00800975;
- 80% Identity
- -