Htar032495.1
Basic Information
- Insect
- Herminia tarsipennalis
- Gene Symbol
- clz9
- Assembly
- GCA_945859575.2
- Location
- OX243854.1:20656976-20659421[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.3e-10 9.1e-08 32.7 0.1 3 38 12 47 10 51 0.92
Sequence Information
- Coding Sequence
- ATGGAACCGCAGAAGCGCAAACAGTACACATCTGCTCGACTAGAAGCTGCGCTTCGAGCTATAAATGAAGGGACCAGCATATACGAAGCTTCAAAAACCTATGGCATACCAAGAACAACTCTGCGTGACAAGAGAAATAATAAATATTCAAATGAACATTGTGGAAAACAAACAGTTTTGACGAAGGACGAAGAAAAAAGACTAGTGGACTGGATTTTCTATCTCGGGAAGTCTGGTTTTCCTGTAACTAAAGATCAGTTGTTGGAAACAGTAGCAAAATTGGTGGAAAACTTAGATCGCTCTAATCCTTTTAAAGATGGTGTTCCTGGTAAAGGATGGTTCCTCAAGTTTATGGCAAGACACCCTACCATTTCAAAGCGAATCACTCAGAATTTGCCTACAAGCCGTACAGTCATTACAGAGGAAGCTATAAAAGCATGGTTCAATCGCGTACACCGTTATTTTGAACAGAATAATCTTCTTGATATTTTGCAAGATCCTAGTCGAATCTTTAATTGCGATGAGACCGGATTTTTTTTATGTCCCAAAGGCAAACAGGTTCTCGTCCAAAAGGGCAGCAAGAAAGTGTATAGTAGAGTGGCCAACGACGAAAAGGAATGTTTAACAGTGCTAGTAAATGTTTCTGCAGATGCTGCAATAGCACCTCCCCATGATCTTATATCCGTACAAACGTTTACCAAAAAACATTGTTCCAACATTTTTTGCAAAGAAAAGGGAATAGTTCTTATAGCATTATTACCTAATGCGACACACGTACTCCAACCCTTAGACGTCGCTGTATTCAGACCTGTGAAAGGAACTTGGAGAACTGTAGTTCACGACTTTAGGGTTCAAAACAACTTTGCAAAATTAAGACGAATAGATTTTGCACCTCAAGTGGATATTTGCTTAAAAAAGACACTCGTTTCTCAAACAATTAAGAATGGATTCCAATGTTGTGGATTATATCCTTTTGGGCCTGATAACGTAAATTATGATAAACTTTTAACTAAAAGCGTTATTGGAACTAGTGAAGAAAGTGGGGACAATGCAGATGATAATAGTAGCCATGCGTCGAGATCCGTATCGGACAATGAGAGAAGTGTCGACGATACAGAAAAGTTTAAACAGCAGTTTGAACGTCGTTTATCACCTGAAGTTCTCTTAATGTTCCAAAGATCAGGATCATCATGGAATGGAGATGCGACTTACAGTAAATTATTTGAGTTTTGGAGGGATATTAATGCTACAGACCATACACTTTTACAACAAACTTTCGATGACAATTTAGAATTGGGTGATACGACGCTTGTCAACAATATTTGTGAAGATGAGACGTTGATTTATGAAGTCAGTGCAAGTGGACGTCTTGTTCCAAACACTTACCAAGAAAATGTGGCATTTGTTAACGTTTCTAATAATGTTTTAAGGTTTCCCATGGACGAATTGCTATCTCCAATTATATCAACAGAAACAAGTACGGTAACTTTATTGAGCACTCAGCCTGAATCGAATGTTTTAGAATATGTTAACGAGATATCCCCTAAAACAACTACTACTTTAACTGATTGCAACAGAGTGTTAAACAGTGAAGATCATAATGCAGGCACATCAACTCCTAAACAATCTAATAACAACTTTATCGATGAACATCTGCCTTCAGTATCCGGAATCAATCAATTGAATAAAAATCATAGTGACACATTATTTCAAAATTCTAATCATTCAAAGTTTATACCAAAAGAACTCAATCTTACAACTCCTTTTAAAAATGCCCTATTTTTTCCTCAAGTTGAGACTAAACTTAATAAAAGAGTTTCCAAGAAAATGACACCCACTGTTGCAATATCAGACGAGTTCATGGCATACCAGAAAATAACAGAAGAGAAAAAAGCACAGGAAGAAGAAAAAAGAAAATTACGGAAAGAAAAATTACAAAACAGCAAAATGGAAAGAGAAAAGAAACAGGCAGATCTTAAGAAGGCCCCAAGAAAGAAACCAACAAGTTTAAGAAAACATAATACATCAAAGGCATCGGGAATAGGTTCTAATAAGGCGTCAAGTTCAGAATCTGAATCTGACTTAGTATCAATTCCACGACAAAATAAGGTGAAAAAGAATTCAATACGTTCAGGTCAAGATTTAACATCTAGAGTTCTTCCAAATACATCATCATCTGATACTGATGATTTACCAATACGTGTACCAAACACTATGTCGTACAAACGACAAATTGTTTTTCCATCTGACTCTGATTCTGATAATATTTTTTAA
- Protein Sequence
- MEPQKRKQYTSARLEAALRAINEGTSIYEASKTYGIPRTTLRDKRNNKYSNEHCGKQTVLTKDEEKRLVDWIFYLGKSGFPVTKDQLLETVAKLVENLDRSNPFKDGVPGKGWFLKFMARHPTISKRITQNLPTSRTVITEEAIKAWFNRVHRYFEQNNLLDILQDPSRIFNCDETGFFLCPKGKQVLVQKGSKKVYSRVANDEKECLTVLVNVSADAAIAPPHDLISVQTFTKKHCSNIFCKEKGIVLIALLPNATHVLQPLDVAVFRPVKGTWRTVVHDFRVQNNFAKLRRIDFAPQVDICLKKTLVSQTIKNGFQCCGLYPFGPDNVNYDKLLTKSVIGTSEESGDNADDNSSHASRSVSDNERSVDDTEKFKQQFERRLSPEVLLMFQRSGSSWNGDATYSKLFEFWRDINATDHTLLQQTFDDNLELGDTTLVNNICEDETLIYEVSASGRLVPNTYQENVAFVNVSNNVLRFPMDELLSPIISTETSTVTLLSTQPESNVLEYVNEISPKTTTTLTDCNRVLNSEDHNAGTSTPKQSNNNFIDEHLPSVSGINQLNKNHSDTLFQNSNHSKFIPKELNLTTPFKNALFFPQVETKLNKRVSKKMTPTVAISDEFMAYQKITEEKKAQEEEKRKLRKEKLQNSKMEREKKQADLKKAPRKKPTSLRKHNTSKASGIGSNKASSSESESDLVSIPRQNKVKKNSIRSGQDLTSRVLPNTSSSDTDDLPIRVPNTMSYKRQIVFPSDSDSDNIF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01020187; iTF_00794347; iTF_01020186; iTF_01020188;
- 90% Identity
- iTF_00794354;
- 80% Identity
- -