Basic Information

Insect: Hermaeophaga mercurialis
Gene Symbol: -
Assembly: GCA_951812935.1
Location: OX638358.1:35926679-35933837[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.051 6 8.4 2.3 2 23 155 176 154 176 0.96

2 16 1.8e-05 0.0021 19.3 4.5 1 23 181 203 181 203 0.98

3 16 0.00081 0.096 14.1 4.1 1 23 209 231 209 231 0.97

4 16 0.0089 1 10.8 2.1 1 19 237 255 237 256 0.96

5 16 2.2e-06 0.00025 22.2 0.2 1 23 265 287 265 287 0.98

6 16 0.046 5.4 8.6 0.4 1 23 530 553 530 553 0.94

7 16 3.9e-05 0.0046 18.2 4.5 1 23 559 581 559 581 0.98

8 16 3.9e-06 0.00046 21.4 5.1 1 23 587 609 587 609 0.98

9 16 1.4e-05 0.0016 19.7 2.1 1 23 615 638 615 638 0.94

10 16 0.009 1.1 10.8 1.2 1 23 652 674 652 674 0.87

11 16 0.00013 0.015 16.6 4.3 1 23 680 702 680 702 0.98

12 16 2e-06 0.00024 22.3 0.5 1 23 709 731 709 731 0.96

13 16 2.6e-06 0.00031 21.9 1.2 1 23 737 759 737 759 0.98

14 16 3.9e-07 4.6e-05 24.5 0.9 3 23 767 787 765 787 0.96

15 16 1.9e-05 0.0022 19.2 0.1 1 23 793 815 793 815 0.99

16 16 0.053 6.3 8.4 0.7 1 23 820 843 820 843 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.051	6	8.4	2.3	2	23	155	176	154	176	0.96
2	16	1.8e-05	0.0021	19.3	4.5	1	23	181	203	181	203	0.98
3	16	0.00081	0.096	14.1	4.1	1	23	209	231	209	231	0.97
4	16	0.0089	1	10.8	2.1	1	19	237	255	237	256	0.96
5	16	2.2e-06	0.00025	22.2	0.2	1	23	265	287	265	287	0.98
6	16	0.046	5.4	8.6	0.4	1	23	530	553	530	553	0.94
7	16	3.9e-05	0.0046	18.2	4.5	1	23	559	581	559	581	0.98
8	16	3.9e-06	0.00046	21.4	5.1	1	23	587	609	587	609	0.98
9	16	1.4e-05	0.0016	19.7	2.1	1	23	615	638	615	638	0.94
10	16	0.009	1.1	10.8	1.2	1	23	652	674	652	674	0.87
11	16	0.00013	0.015	16.6	4.3	1	23	680	702	680	702	0.98
12	16	2e-06	0.00024	22.3	0.5	1	23	709	731	709	731	0.96
13	16	2.6e-06	0.00031	21.9	1.2	1	23	737	759	737	759	0.98
14	16	3.9e-07	4.6e-05	24.5	0.9	3	23	767	787	765	787	0.96
15	16	1.9e-05	0.0022	19.2	0.1	1	23	793	815	793	815	0.99
16	16	0.053	6.3	8.4	0.7	1	23	820	843	820	843	0.97

Sequence Information

Coding Sequence: atggaaattgaAAACGTGAATCTCGGCAGGATTTGCCGGACATGCAAATGCGTCAGCCCACATATGCGATCCTTGTTTGAGGGTTATGAAAATCCTCATCAGAGTCCCCGTATTGACGAGATGCTAATGGCCTGTTCTTCAGttcagGTGATTTGTGGGGACGGATTGCCGAGTTTAATATGCCAGATATGTGTGGAACAGCTCAAAAATGCATATCTTTTCAAAAGACAGGCCGAAAAAGTGGATATGGGCTTAAGGGAGTACGCAAAAAATCTTaaagtaaatgaaattaaacaagaattaCAAAACTCGGAATTTATGGAATCTCTGAATACTTTAGATAGTATTCTAAATGAACAGGCAACCTCTAAAGATGTTATCAACACAGGAGAAGTTGTGGCTCCGGcacaaaaatttgaaactgATTACATTCAATTTATGGACAACAATCAAATGTTGCTCACATGTCGAGAGTGTGCTAAAATGTTTACCACTTTGGAGgGCCTTAGATGTCATAAACGCATTCACACTGGAGGCATGTACAAATGTAAGCAATGTGACAAAGAATATACAAGACTTAACCATCTACAAAGACATGAACAATCTCATAACAGAAGAAAAGTCCACGTGTGCCGAATATGCAGTAAAACTTTGACAAGGATGGAGCATTTAAAACGCCACTTGGTTACTCACCTTAGAGAAAAGCCATTTTCTTGTAAAACTTGTAATAGGGGCTTCAATCGTATTGAACATTTACATAATCATGCTCCTCGGTGCAAAGGCGACACGGTATATCCTTGCGATATTTGTAACAAGGCATTTAATCGCGAGGACAGCCTTGAGGTTCACAAAAAAATGCACGACAACCAAGCTCCAAAATTACCTACTATTGAAAATCTCGACAACATTGAAGATCATTATTACCAGATTGACCAGGATAATACCACCGCTGACTTTTCCGATCATTCTGATGTTGATGATTGTTTTGAACCTCAAGTTGAGGTAACTGAGACTGAAGATGACAAGCTTAAAgttGTTGCAGAAATTTCAAAACAGGATCAAGATCAAGAAGATGAAAGTTTACATAGCGACGGTGAATGTGATAATGATGATACCGGTTCAATGGGAGGTGGAGATatagaaaatgatgatgataatgacaGTGATATTGATGATGGTGATAAGGATATTGATGATAATGAGGACAGTTCTGAGGAAACTAAACAAATGCCATTGGGACATCAAATGACTGAAGAAGACAAATCAGATGTCAAAATTGAATCATCAAAATTACATGATGACGATGATGATTATATTAAGGACGTTATTGCTGAAGCTGAAGCTgatgatgaTGATTCGGATAAAGATAGTGCAGATTCTGATTACACACCCAAAAAACCTGTTGTAAAAGTAAAACGAGGCCGAGGTAGGCCTCGCAAAAATCCTGATGAACCTCCCAAAACCAAAAAACTCAAAACTGGCAAAATGCCAGGAAAGAGAGGACGTAAACCAGGTTCAAAGAATAAAGTTAAAGAGACTGGTGAATACTCGcttaaaagagaaaaagaggATGAGGAATATGGAGAATTTCCTTGTCCTATTTGTAATGAAATGTTCCATGGTATTCTTAAATTGGACAAGCATGCAAGAATGAAACATGAAGGTGCCAAGattcatAAATGCAACGTGTGCAATAAAGAATTTGCCCGAATTAATCACTTAAAGAGACACATCACATCCCATTCAACTATCAAACCTTTCCGCTGCACTGTGTGTACAAAGAGCTTTAACAGACGCGATCATCTTAATCAGCATCAGAAACTGCACGACAGACAGAATGATCATGAATGCGACATCTGTCAAAAACCATTTTCTAGAGCTGATCACCTTGCCAAGCACAAAGCTTCAAAACACGGCATAGGAGAAAGAATTTCAATGATAGGAGAAAAGAAATACGAATGCCCACTTTGTCACAAATTCTTCACCACAGAAAAATACAGGGATGTTCATGTCGCTGGACACAACGGAACAAAAGAGTATTCATGCAAAGTATGCGAGAAGACTTTCCTGTCTAAATCTCATTTGACGGAACATATGAAATTCCATAATGAACATTCCAAGAAGTTCCTCTGTTCAGAATGCGGACAGAGATTCATTAGGAATGACTATTTGGTCATCCATATGAGAAGACATAGAGGAGAAAAGCCATTCAAATGCAAATATTGTGGAAAAGGTTTCCCAAGAACAACCGATCTTACTGTTCATGAAAGATATCACACTGGTGAGAAAACTCACTTATGTACAATTTGTGGAAGAGGGTTTGGAAGGGCGTACAACTTAACAGTCCATATGAGAACACACACTGGTGAGAAACCATACCAATGCACTTATTGTGATGCCGCCTTTGCCCAAGGTAATGATCTGAAAGCCCACGTAAGGCGACATACTGGAGAACGGTTTCAATGTGAATTATGTACTGAAAGTTTCTTAATGGGTTATTTATTGACACAACATAAACGTACAATTCACGggCTAAATGTTGTAAGCAACATCAGAAGGTTGCAACCTGTTCATAAACAGGAAAATCCAGACGAACCTCCTCCAATTACAATACCACTTCCGAAACCAGTCATTCCTGACAATGTTATGTTCAATGCCTTACATGCAAACGCGCTCCATGCTAATGCTCTTCACGCAAACGCTCTCCATGCTAATGCGCTTCACGCGCAATTAGCTGTGGCGCAACTTCATTTAGCCAGGGAATAA
Protein Sequence: MEIENVNLGRICRTCKCVSPHMRSLFEGYENPHQSPRIDEMLMACSSVQVICGDGLPSLICQICVEQLKNAYLFKRQAEKVDMGLREYAKNLKVNEIKQELQNSEFMESLNTLDSILNEQATSKDVINTGEVVAPAQKFETDYIQFMDNNQMLLTCRECAKMFTTLEGLRCHKRIHTGGMYKCKQCDKEYTRLNHLQRHEQSHNRRKVHVCRICSKTLTRMEHLKRHLVTHLREKPFSCKTCNRGFNRIEHLHNHAPRCKGDTVYPCDICNKAFNREDSLEVHKKMHDNQAPKLPTIENLDNIEDHYYQIDQDNTTADFSDHSDVDDCFEPQVEVTETEDDKLKVVAEISKQDQDQEDESLHSDGECDNDDTGSMGGGDIENDDDNDSDIDDGDKDIDDNEDSSEETKQMPLGHQMTEEDKSDVKIESSKLHDDDDDYIKDVIAEAEADDDDSDKDSADSDYTPKKPVVKVKRGRGRPRKNPDEPPKTKKLKTGKMPGKRGRKPGSKNKVKETGEYSLKREKEDEEYGEFPCPICNEMFHGILKLDKHARMKHEGAKIHKCNVCNKEFARINHLKRHITSHSTIKPFRCTVCTKSFNRRDHLNQHQKLHDRQNDHECDICQKPFSRADHLAKHKASKHGIGERISMIGEKKYECPLCHKFFTTEKYRDVHVAGHNGTKEYSCKVCEKTFLSKSHLTEHMKFHNEHSKKFLCSECGQRFIRNDYLVIHMRRHRGEKPFKCKYCGKGFPRTTDLTVHERYHTGEKTHLCTICGRGFGRAYNLTVHMRTHTGEKPYQCTYCDAAFAQGNDLKAHVRRHTGERFQCELCTESFLMGYLLTQHKRTIHGLNVVSNIRRLQPVHKQENPDEPPPITIPLPKPVIPDNVMFNALHANALHANALHANALHANALHAQLAVAQLHLARE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01047646;
90% Identity: iTF_00387439; iTF_01047646;
80% Identity: -