Hmer013503.2
Basic Information
- Insect
- Hermaeophaga mercurialis
- Gene Symbol
- lrrfip2
- Assembly
- GCA_951812935.1
- Location
- OX638361.1:21014698-21020927[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2e-111 3.5e-107 359.1 23.7 1 300 106 393 106 393 0.96 2 3 0.15 2.5e+03 -1.7 2.9 123 164 394 435 391 455 0.61 3 3 0.28 4.8e+03 -2.5 3.7 7 234 425 463 412 468 0.43
Sequence Information
- Coding Sequence
- ATGGTTTTTGTCGGTGTTGTTACTTGTCTTCCTACGAACCATATTCTGTGTGAAACCATCGAAAATATGGTTGGAGTAGAAAAATTACCGAGTGCCTTGAAGCTCGACCAACTAGCCGCCCTGATTCGATCCCCTTCGATTACGGATTGTCTCTATGATAAACCCAAAGCTAACGTTTTGTTGGTTACTACAGTTTCGTTGTCTAAGAAAAACGTAAATTATGTAGAAGAAAGTGGCAATTTCAGTGACACTTCTAGTGAAAATGACGGTGAAACTAACTTAATTGATACATTTATGAAATGTACAAATGATGAGGCTGAAGCACGACTATGGGCAAAGAGACAAGCAAGAGCCGAAGCTCGAGAGATTCGTATGCGCGAATTGGAACGTCATCAGAAGGAACAAGAAGAAAACGCCGACAGGCACTTCGATATGTTGTCGTCAGAACCAAATTCATTAGTTAGGACACCCCGGAGCGCTGGTACTCGATACTTGTCGAGCAGACGGAGCTCTGAAGACTCCTTGGAAGATGGAGGAAGTCTTCGGGAGTTAAGGCACGAGCTCAAAgaagttgaagaaaaatttagaaaggcCATGATAGCGAATGCACAATTGGACAATGACAAATCTGCGCAGACGTATCATTTGGAATTACTGAAAGATAGactgGAAGAATTGGAAGAAGACCATTCTCAATTAAAAAGAGAACATAGGGACAAGTGTAGGGAGCACCAGACTCTGAAAAGTATTTGTGCAAAACTTAAAGATGATCTCGCTTTCGTTAAATATGAATTAGAAGAAAGGGATCGACTTATAGCTGAAAAAGGCCTTGTGATAGTCGGCGAAGAGCTACCACCTGATGAAGATGGTACCCAACACCCGCCTAAAAAGGCGTTAGTCAGTGCAGAAAATGCCAATTTGCTAGAGACTGCCGGTGATGGTAGTTTAGACGTACGGTTATCTCgattcttaaaagaaaaaactgaaCTGCAGGATCAAATTAGCCATTTAAAACTAGaattagaagaagaaagaaatCAAAGGAGGAAACCGAGTTCTACTGGAATTATGAACGGACCATCCTCAGACTATGATTATGACGACATTCAAAgAGAAGCCAGTAAGCAGCTTGCAGATTGGAAATTCCGAGCACAAAAGGCCGAACAAGACACGGCAACGTTACAAGCAACAGTGGCGCGTCTTGAAAGTCAGGTTATACGATATAAAactgcagcagaaatttctgaACAGTCTGAAGAAGCTCTGAAAGCTGAAAAGAGAAAGCTTCAGAGAGAGGCAAGAGATGCAATAAATCGGGCAGAGGAACTAGAAACATCAAATACACACTTACTGAAGAGATTAGATAAGTTAAAAAATGCCAAGTCGGCCTTATTAAAAGAGCTCTGA
- Protein Sequence
- MVFVGVVTCLPTNHILCETIENMVGVEKLPSALKLDQLAALIRSPSITDCLYDKPKANVLLVTTVSLSKKNVNYVEESGNFSDTSSENDGETNLIDTFMKCTNDEAEARLWAKRQARAEAREIRMRELERHQKEQEENADRHFDMLSSEPNSLVRTPRSAGTRYLSSRRSSEDSLEDGGSLRELRHELKEVEEKFRKAMIANAQLDNDKSAQTYHLELLKDRLEELEEDHSQLKREHRDKCREHQTLKSICAKLKDDLAFVKYELEERDRLIAEKGLVIVGEELPPDEDGTQHPPKKALVSAENANLLETAGDGSLDVRLSRFLKEKTELQDQISHLKLELEEERNQRRKPSSTGIMNGPSSDYDYDDIQREASKQLADWKFRAQKAEQDTATLQATVARLESQVIRYKTAAEISEQSEEALKAEKRKLQREARDAINRAEELETSNTHLLKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01226914;
- 90% Identity
- -
- 80% Identity
- -