Basic Information

Insect: Hemistola chrysoprasaria
Gene Symbol: -
Assembly: GCA_947063395.1
Location: OX346722.1:6620370-6622295[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1e-08 6.7e-06 26.4 0.2 4 40 21 57 18 62 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1e-08	6.7e-06	26.4	0.2	4	40	21	57	18	62	0.87

Sequence Information

Coding Sequence: ATGGAAAGCGGATCACCAGCTTCTACCACAAGGAAAAGAAGGGCTCAATGGACTTCGCAACAGATGGAAAACGCTGTAAAAATGGTAGAAAGGGGAATATTATCTACATATGCTGCTGCAGCCAGATATAATATCCCAAGAAGAACCCTACGCAACCATCTAAAGAGTGGTTCGACTACACGAAAGCTAGGTCGGTCGGCTATATTGACTGCAGAACATGAAGCTGGACTTGTCAGAAGAATCATACGTTTGGCTGATGTTGGAGTGCCGATGACTTCAAAAATGTTGCGCATACAGGCTTTTTCATTctgtaaaattaagaaaattcctaacacTTTTAATGATGCTAAAAATGCTGCGGGGAAGAAATGGTTGAGGTTATTTCTCAAACGACACCCTGAGTTAGCACGTCGTAAAGCACAGATGATGAATCCAGCTCGTgctcaaaaattaaataaagatattgTTGGCGATCACTTTTCCAAATACAAAAGCGTGCTAGATAGACTGGGAATTGAACATAAACCTGAAAGCATTTACAACATCGATGAAAAAAATTGCCGCATATCTTTGCACCATCAGCAGGAAGTTCTGACAGCCAGAGGGAGAAAGAGGGTTCATCAAATAGCGAATGAGCATGCTGAAAGTGTGACTGTGGTAGGCTGCGGAAACGCTATAGGATCAGCTATTCCGCCAATGATACTGTTTAAAGGCAAGAGATTAAAGCCGGAATTCCAAGATAATTTACCTCCAGGCTCTCTGGTGAAGATGACGCCAAAAGGAAGTATGACGACAGAGACTTTCATAGAGtttataaatcatttgaataaatacaGAACATCAGGGCCATGTCTCCTCATATTTGATGGTGCAAAATGCCACCTGGACTTTACTATTGTCGAGGAAGCTGAGAAATGTGGCATTACTTTATATTGTCTTCCGTCAAATACGACGCATGAATTACAACCCATGGATAAATCTGTTTATCGTTCTTTTGAGCATCATTGGGACCAAGAGTTGATTAAATACGTCAGTCAGCATCCCGAACGATCCCTTAACAAGACTAGCTTCAATGTAATTCTGTCACAGGTATGGCCGAAATGTATGACAATTTCTAATATCACGAATGGGTTTCGCGCTACAGGGTTGTATCCATATAACCCAGATGCTATTTCTGAAGAGGCGTTTGCGCCCTCTGCGTTGTCAGAACTCCCAGTTCCTTCAAACAGGGAGAATATTGCTGTCTTCTCTGATGCATTGAGGGAACAGGCGACTTCAACTGGAAATGTGGAAGATTCAGATGGGTCAGGCACAGACACTGAGAATTTGCCACTGTCCTTGCTCTCAAAAAACAAATCTCCGAATTCTGGAACTCCAAATAAGATAAACAAACAGTCAACCACGTGTGAGGTTCATGATTTTTTACCCACACCTAAATTTAAAGTTAAACCGACTTTGCCACGTAAGAAGTCTTTAAATTACAGGGCTCAAGAAGTAACAAAAGATTTGTTTGGTGACAATGCTACGAATTCCACATCACAAATTACTGTACCATCGTCAAGAAAAGAAGATGTTCCTGGTACTTCTTCCATGATGAAGATAAACACAAAGTCACCAAAAGTAGCAGTTACTGGCTGTACATCTGCACAACCTGCAGTGACTGCTACGCGACACCGAACCTCAGTAAAGACTGTTTCTTTGATCGCAGATAAGCTTACGGGATCTAAACCAAAACGTCGCGATAACAAATCTTCTTCATCATCTTGGTACTGTCCAGCTTGTAATGAAGATAGAGTTGATGATATGCGACAATGTCTTACTTGTGACGTTTGGTATCATGAGCTGTGTGTTGGACTCACACCCGCTGAGAAAATATTTTACTGTTCAGgagattgtttaaaaaaaaagatgaaaaaggCTGATTAA
Protein Sequence: MESGSPASTTRKRRAQWTSQQMENAVKMVERGILSTYAAAARYNIPRRTLRNHLKSGSTTRKLGRSAILTAEHEAGLVRRIIRLADVGVPMTSKMLRIQAFSFCKIKKIPNTFNDAKNAAGKKWLRLFLKRHPELARRKAQMMNPARAQKLNKDIVGDHFSKYKSVLDRLGIEHKPESIYNIDEKNCRISLHHQQEVLTARGRKRVHQIANEHAESVTVVGCGNAIGSAIPPMILFKGKRLKPEFQDNLPPGSLVKMTPKGSMTTETFIEFINHLNKYRTSGPCLLIFDGAKCHLDFTIVEEAEKCGITLYCLPSNTTHELQPMDKSVYRSFEHHWDQELIKYVSQHPERSLNKTSFNVILSQVWPKCMTISNITNGFRATGLYPYNPDAISEEAFAPSALSELPVPSNRENIAVFSDALREQATSTGNVEDSDGSGTDTENLPLSLLSKNKSPNSGTPNKINKQSTTCEVHDFLPTPKFKVKPTLPRKKSLNYRAQEVTKDLFGDNATNSTSQITVPSSRKEDVPGTSSMMKINTKSPKVAVTGCTSAQPAVTATRHRTSVKTVSLIADKLTGSKPKRRDNKSSSSSWYCPACNEDRVDDMRQCLTCDVWYHELCVGLTPAEKIFYCSGDCLKKKMKKAD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01220597;
90% Identity: iTF_00709168;
80% Identity: iTF_00790201; iTF_00790200;