Hnig000380.1
Basic Information
- Insect
- Hemicrepidius niger
- Gene Symbol
- Rel
- Assembly
- GCA_963082805.1
- Location
- OY720159.1:2580831-2586213[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-35 2.2e-31 110.2 1.0 1 168 90 283 90 284 0.87 2 2 2.2 2.2e+04 -3.7 0.0 103 122 804 823 789 837 0.54
Sequence Information
- Coding Sequence
- ATGTATCAGTTAAGTGCTAATACAGCTGCAATGCACATACATTCCAATTTTCTTGAAAGACAGGGTTTGGaaccCACAGTGGACATGAACAATTACCCCAACGTTTTAACACCTCCGATGGATTCACCCGATTCCACCATGTTGTCACCTTCTTCAGGAAGTAACTCGCCCCATCAAAACTACATGGGCTCAGGATACATTAATCCCTATTCATATACAAGTGTCATGCAACTGCAGGgcaCTACAAACTCAAACTCCTCCCCATTCCTTACTGTGGTGGAAGAACCTGTCGAAAGATTTCGATTCCGTTATAAATCCGAAATGGCAGGCACTCATGGTTCTTTGAATGGTAGAACTTCAGACCGATCACGCAAACAAACCTACCCAACAGTTGAGTTGCACAATTTCGATAAACCTGCAGTTGTGAGATGTTCACTTTATCAATGGGGAAGGGAGGATATGATACATACCAGACAACCACATGCCCATAGACTTGTTAAAAAACAAGGGAGTGAAGAAATAGATGATCCCCACGATATGCATGTTAATGTCGATACTGGATTTGTTGCAAAttttcataGCATGGGAATTATCCACACAGCAAAAAAATACATAGTGCCAGAGCTTTTACGTAAGAACACGAAATTAAAAGAGGAAGAAGTTTCAAGAACAGAATACAAAAGCAGGACATTAACCAAAAAAGAAGAGCTCGAGGTTAAATTAGTAGCAGAAAAAGAAAGCAAATCTATTAATCTAAACATTGTTTGCTTACGATTTGATgcatttaaaatagtaaataatatttactaCCCACTTTGCAAACCTGTATATACCCATGCCATCAATAACTTGAAAAGTGCCCTTACTGGAGACTTGAAAATAGTCCGAATGGACCATTGTACAAGTCCTAGTCGTGGAGGACGcgaaatttttatattagttGAAAAGGTAACAAAAAaaaacATCAAAGTACGGTTTTATGAACTTGATGACGATGACAATGAAATTTGGAGCGATTTTGGAAGATTCAGTGACTTGGATGTCCATCATCAATATGCCATTGTTTTCAAaaccCCTCCTTATAAAATCTTGGACATTGATAGACAAGTAAAAGTTTGCATAGAACTCCAACGACCTTCTGATGGTGCTAGAAGTGAACCTAAAGACTTCACTTATACCCCACCAGAAATATCACTTGGCCGTAAACGAGCAAGATGTAGTTCAAGCGGTTATACAAGCTCCAGTTTTTCAAGCGATGAGATTCCATTAACTATAAACAATTTGAGCATGAACCCATCCCCTTTGAACCCACAAGTATTAAACAACTTCATGGATGTTAATATGGTCAATAGTGATGACCTTGAAGATGCTTTGAAACATGGAAAAATTGATTCGAccgaatttgaaaatttatgtaaatcaTTATTAAGTGTAGGACCAATCCAAGAACTATACGCGGAACACACGAATATAACTAATGAAGACTTGATTGGCCTTACAATGGATGCTCCGCAAATAAGTTTTGATGAAAGGTTTAATCACTCCGACTTGAAACCTGTAATAGCGGAGGGGGAAAGACCGTTTATCCGTAATTCGCCAACAAAAAAATTGGATCCTAGTGATCAAGAAATCGTAGATAGGGTGAGAACAGAATTAGTggcttttataaaaacaaacccTGTAAAGAAAAGGGTGACTGTTatgttggaaaatttatttacaaaacctTGTTTTATTTCCGAATCTGGAGATAgTGTGCTCCATTTATTAGTTTCGGAAAATAAccacacaaacaattttttgttgtttcttCTAAAAGTTATGCTAAAATATCAACAAACTGATCTAATAAACTTGCGTAATAAAATTGGACAGACTGCATTGCATCTAGCAGTTGAATCTCGCAATTCAATGGTGGTTGAACATTTAATGTATACCAGAGCTGACGTTTCTCTTCAAGACTTTGAGGGCAACACTGCTCTTCATCTTGCTGTGATGAAAAGCGCCCCAATTACCATCGTTAAATTACTTTTAACCCCTGGGAGCGATACGAAGAAATACATTGATGCATTAAATTATGatggGCATACGGCTCTGCATTTGGCAGTAAAAACAAATAATGTACATGCAACAAGATTACTGTGTTTGCATCTTGCTGATGTGAATGCGgatgataaaaaaaatggttaCACAGCTCTTCACATGGCCGTGGCAGATCAGCATGTAGAAATAATTCACTTTTTATTGGATAATACTGATATAGAACCAGAAAAAGAAGATTATGGACAATGTAATCCATTAAAGCTTGCTAAAGTATTAATGAGGGAAGATAAACCTATAACCAAAGAAATATACAACATTCTTGAACATTTCATGaaaaataatggAATATTCGAAGAAGTTGATAtcaaagaagaaattgaagaaatgtCTGATGAAGAAATTGAAGTAAGCACCgacCAATTTAAAGATGAACCCATGTCTCCCCATGACTACAGGCAAAAGTACAGTTTGGTTAAAGGTTTTACCGAAACCTGTCTAAATGAAGTTGCTGCTATATTGGATAAATCAGGAACTTGGCAAAACTTAGCTGACCTATTTGATTATGGATACCTTTTAAGAACGGATCTTTTTAGCACCTTAGAAAAGCCTGCTAAAACTTTATTGGAGTATGCTATGACAAACGGAGAAAATTTACTTCAAGTACGCGATTTCCTTGAACATCTTGATGAAACTCATGCTGTTGACCTCATTGATAAAATGGTAGATGAAGAATGTGAGAAAATGGACAGTTCATAG
- Protein Sequence
- MYQLSANTAAMHIHSNFLERQGLEPTVDMNNYPNVLTPPMDSPDSTMLSPSSGSNSPHQNYMGSGYINPYSYTSVMQLQGTTNSNSSPFLTVVEEPVERFRFRYKSEMAGTHGSLNGRTSDRSRKQTYPTVELHNFDKPAVVRCSLYQWGREDMIHTRQPHAHRLVKKQGSEEIDDPHDMHVNVDTGFVANFHSMGIIHTAKKYIVPELLRKNTKLKEEEVSRTEYKSRTLTKKEELEVKLVAEKESKSINLNIVCLRFDAFKIVNNIYYPLCKPVYTHAINNLKSALTGDLKIVRMDHCTSPSRGGREIFILVEKVTKKNIKVRFYELDDDDNEIWSDFGRFSDLDVHHQYAIVFKTPPYKILDIDRQVKVCIELQRPSDGARSEPKDFTYTPPEISLGRKRARCSSSGYTSSSFSSDEIPLTINNLSMNPSPLNPQVLNNFMDVNMVNSDDLEDALKHGKIDSTEFENLCKSLLSVGPIQELYAEHTNITNEDLIGLTMDAPQISFDERFNHSDLKPVIAEGERPFIRNSPTKKLDPSDQEIVDRVRTELVAFIKTNPVKKRVTVMLENLFTKPCFISESGDSVLHLLVSENNHTNNFLLFLLKVMLKYQQTDLINLRNKIGQTALHLAVESRNSMVVEHLMYTRADVSLQDFEGNTALHLAVMKSAPITIVKLLLTPGSDTKKYIDALNYDGHTALHLAVKTNNVHATRLLCLHLADVNADDKKNGYTALHMAVADQHVEIIHFLLDNTDIEPEKEDYGQCNPLKLAKVLMREDKPITKEIYNILEHFMKNNGIFEEVDIKEEIEEMSDEEIEVSTDQFKDEPMSPHDYRQKYSLVKGFTETCLNEVAAILDKSGTWQNLADLFDYGYLLRTDLFSTLEKPAKTLLEYAMTNGENLLQVRDFLEHLDETHAVDLIDKMVDEECEKMDSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00398610;
- 90% Identity
- -
- 80% Identity
- -