Ccup028136.1
Basic Information
- Insect
- Ctenicera cuprea
- Gene Symbol
- Rel
- Assembly
- GCA_958336395.1
- Location
- OY284490.1:15628618-15638731[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.1e-36 6.7e-32 112.5 0.3 1 168 106 299 106 300 0.88 2 2 1.5 1.1e+04 -2.1 0.0 75 99 423 447 375 460 0.77
Sequence Information
- Coding Sequence
- ATGTGTGTGTATGCTTCAGGGACAGGACCAGGAGAGACCCCACCAGAGGTCGCACTTGCATGTGCATGTGGTAGTGCACCACTCGTGGTGCACGAAACGCGACATCCGTGCGTTCACAAATCGGacACTGTAGTGGACATGAACAATTATCCCAACGTTTTAACACCTCCAATGGATTCACCGGATTCCATAATGCTGTCCCCGTCTTCTGGAAGTAGCTCGCCACATCAAACCTACATCCCTGCAGGATTTGTTCATCAGTACACTTACAGTAATATGCAAGTTCAAGGTAATATACCAACCAACCAACCATACCTAACCTTAGTTGAAGAACCAGTGGAAAGATTTAGATTTCGTTACAAATCAGAAATGGCAGGAACTCATGGTTCCTTAAATGGTAGAAACTCAGACAGGTCACGCAAGCAGACTTACCCTACAGTTGAACTGCACAATTTTGATAAACCTGCTGTAGTCCGGTGTTCACTTTACCAGTACGGTAGGGAGGATATGATTGATACACGACAACCCCATGCCCATAGACTTGTAAAAAAACAAGGTTCAGAAGAAATCGATGATCCCCATGATATGAATGTGAATGCAGATACTGGATATGTTGCAAATTTTCACAGCATGGGTATTATTCACactgcaaaaaaatatatagtgcCAGAGCTCTTacgcaaaaacacaaaattaaaagaagaagaaattgcaAGAACAGAATACAAAAGCCGACCATTAACGAAAAAGGAAGAATTGGAGGTCAAATTATTAGCAGAGAAAGAGAGTAAATCAATTAATCTGAACATAGTATGTTTAAGATTTGATGCTTTTAAAGTTGTTAACAACATCTACTACCCACTTTGTAAGCCAATATATACAAATGCTATCAATAACTTGAaaagtgCCCTTACTGGAGACTTGAAAATAGTCCGTATGGACCATTGTACAAGTACGAGTCGTGGAAAtcgtgaaatttttatattggtaGAAAAAGTTACCAAGAaaaatataaaagtacgCTTTTATGAACTTGATGATGAAGACAATGAAATATGGAGTGACTTTGGTAGATTTAGTGATTTGGATGTCCACCATCAGTATGCCATAGTTTTTAAAACACCACCATACAAAATATTAGATATCGACAGACAAGTCAAAGTATTTATAGAACTGCAGCGACCTTCCGATGGTGCTAGGAGTGAACCTAAAGACTTTACATATACTCCATGTGAAATTGCACTTGGTCGTAAACGGGCAAGGTGCAGTTCAAGCGGTTACACAAGCTCGAGTTTCTCGAGTGATGAATTACCATTAACCATAAATAACCTGGGTATGAATCCATCACCACAACAGGGATTAAACCCACAAGTATTACACAATTTTATGGGTGCTCCCATGGTTAACAGCGATGAGCTGGAAGATGCTCTGAAACATGGCAAAATTGACTCTGCTGAATTCGACAAATTGTGTACATCGCTATTGAATTCTGGTCCAATCCAAGATCTTTATGCAGAAGACATGAATATCACAAATGAAGATTTAATAAGTCTGGCAATGGATGCCCCACAAATTTGTTATGATGGAAGGGTTAACATGGATATGAAACCTATAATGGTAGAACCTGAGTCGAGTTTCGCCATTAATCTTAATTCGCCTTCCAAAAAATTGAATCCAAATGATCAGAAAATAGTGGATAGGGTAAAAACAGAGTTGGTTGCTTTCATCAAAACAAATCCAGCAAAGAAAAGAGCGACTGTAATGCTTGAACACCTTTTCAAAAATCCAATTTATATTTCTGAAGCAGGAGACAGtGTTCTCCATCTATTGGTTTCGGAAAACAACAACACAAACAACTTCTTGTTGTTTCTATTAAAGGTATTGCTTAAGTATCAGCAAACCGATTTGATAAACCTTCGTAATAAAATTGGGCAGACTGCCCTGCATCTGGCAGTTGAATCTCGTAATGTAATGGTGGTGGAACATCTAATGTACACAAAAGCTGATGTTTCGATCCAAGACTTTGAGGGCAACACTGCCCTTCATATTGCTGTTATAAAGAGTGCACCTATTACCATCGTCAAATTACTCTTAGGTGGAAGTgataccaaaaaatatattgacACCCTAAATTATGATGGGCATACAGCTCTGCATTTGGCCGTAAAAATGAATAATGTACCTGCAACTAAGTTATTGTGTTGGAATCATACAGATGTTAATGCTGATGACAAAAAGAATGGATACACAGCTCTTCACATGGCTGTTGCTGATCAGCATGTAGATATTATAAACTTCTTGCTAGAAAATACTGATATAGAGCCCGATAAAGAAGATTATGGGCAATGTAATGCATTGAAGCTTGCCAAAGTATTGATGCGCGATGAAAAACCCATcaccaaagaaatttataatattcTTGAGAGTTTCATGAAAACTAATGGAATATTCGAGGAAGTTGAAATAAAGGaagaaattgaagaaatgtCTGATGAAGAAATGGAGGAAGTTAAAGAAGAACCCATGTCTCCCGATGGTTTTGAAAGCAAATACTGTACAGTTAAAGGTTTCACAGAAACATGTCTGAATGAAGTCGCTGCTATATTAGATAAATCCGGCACGTGGCATAATTTGGCTGATCTACTAGATTATGGACATCTTTTGAGAACTGATATCTTCCAATCTCTAGAAAAGCCATCCAGAAGTTTATTGGAGTTTGCAATGGCAAATGGGGAAAATGTGATCCAAATACGTGAATTTCTCGAACATCTTGACGAATTTAAAGCTGTTGAGCTCATCGACCAAAtgataaaagaagaaaatgaaaaatga
- Protein Sequence
- MCVYASGTGPGETPPEVALACACGSAPLVVHETRHPCVHKSDTVVDMNNYPNVLTPPMDSPDSIMLSPSSGSSSPHQTYIPAGFVHQYTYSNMQVQGNIPTNQPYLTLVEEPVERFRFRYKSEMAGTHGSLNGRNSDRSRKQTYPTVELHNFDKPAVVRCSLYQYGREDMIDTRQPHAHRLVKKQGSEEIDDPHDMNVNADTGYVANFHSMGIIHTAKKYIVPELLRKNTKLKEEEIARTEYKSRPLTKKEELEVKLLAEKESKSINLNIVCLRFDAFKVVNNIYYPLCKPIYTNAINNLKSALTGDLKIVRMDHCTSTSRGNREIFILVEKVTKKNIKVRFYELDDEDNEIWSDFGRFSDLDVHHQYAIVFKTPPYKILDIDRQVKVFIELQRPSDGARSEPKDFTYTPCEIALGRKRARCSSSGYTSSSFSSDELPLTINNLGMNPSPQQGLNPQVLHNFMGAPMVNSDELEDALKHGKIDSAEFDKLCTSLLNSGPIQDLYAEDMNITNEDLISLAMDAPQICYDGRVNMDMKPIMVEPESSFAINLNSPSKKLNPNDQKIVDRVKTELVAFIKTNPAKKRATVMLEHLFKNPIYISEAGDSVLHLLVSENNNTNNFLLFLLKVLLKYQQTDLINLRNKIGQTALHLAVESRNVMVVEHLMYTKADVSIQDFEGNTALHIAVIKSAPITIVKLLLGGSDTKKYIDTLNYDGHTALHLAVKMNNVPATKLLCWNHTDVNADDKKNGYTALHMAVADQHVDIINFLLENTDIEPDKEDYGQCNALKLAKVLMRDEKPITKEIYNILESFMKTNGIFEEVEIKEEIEEMSDEEMEEVKEEPMSPDGFESKYCTVKGFTETCLNEVAAILDKSGTWHNLADLLDYGHLLRTDIFQSLEKPSRSLLEFAMANGENVIQIREFLEHLDEFKAVELIDQMIKEENEK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00788296;
- 90% Identity
- -
- 80% Identity
- -