Hhel010140.2
Basic Information
- Insect
- Helleia helle
- Gene Symbol
- bab1
- Assembly
- GCA_963853865.1
- Location
- OY971420.1:1521344-1526467[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-17 1.8e-14 54.0 0.0 1 43 41 84 41 86 0.95 2 2 9.2 5.2e+03 -1.9 1.6 6 15 176 185 172 187 0.83
Sequence Information
- Coding Sequence
- ATGGAGATCGCAGATAGCTACCAATACCAGCTACAGTCAATGTGGCAGAAGTGCTGGAATACGAACCAGAGCCTCGTCCACAATCTACGATTCCGCGAACGCGGCCCACTGAAATCATGGCGACCAGAAACAATGGCTGAAGCCATCTTTTCCGTGCTGAAAGAAGGATTATCGCTGTCGCAAGCAGCAAGAAAATACGATATACCATACCCGACCTTTGTGCTGTACGCCAACCGCGTTCACAACATGCTCGGCCCCAGCGCAGATGGTGGTGCAGATTTGAGACCCAAAGGGCGCGGACGTCCGCAGCGCATCCTCCTAGGAGTGTGGCCAGACGAGCACATCCGCGGGGTGATCCGGGCCGTGGTGTTCCGCGACTCCCACACCCCGCACCCCACTCACCACATCAAGGAGGAGGTCCTTCCAGTCTATCCTCCGATAACGGATGGCATCAACGTGCAGAACACATACGCCGTGGCCTGTGGCAACGGGCGCGAGGGTGGCGTGTCCCCGAACGCCGCCGCAGCCGCCGCAGTGGCCGCGGTTGCCCACGGCCTGCGCCGCCAGATGTGCAATATGGTAGTGGCCGCGCAGAGGCCGCCCGACCACCCGCCGCACCTCGGCCTGCCGCCCTTGCCGCTCCAGTCCCCGCGCCTCTCCTCCCCGCTCTCGGCCGGACTCGAATCCCCGCTCTGCTCGCCGCCACCGCCAGGTCACGCTCTCGAACCCCCGAAACCCACTGACCCGTTCCGCCCGTTCGCCTCGCCCCGCCCGGACAGCCGCTACGGAGAACGCGACGTGGTATCCGACATCACAGACATGGGACCGCCCAAGACGCCAGTATCGATCGCTAAGAACGGCAAGGATCTTTCTACCCCGGTGCCGGTGAAGATCGAGCCCCCGCCGGCGGAGACGCGTGCCGAGAACATCTGA
- Protein Sequence
- MEIADSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDSHTPHPTHHIKEEVLPVYPPITDGINVQNTYAVACGNGREGGVSPNAAAAAAVAAVAHGLRRQMCNMVVAAQRPPDHPPHLGLPPLPLQSPRLSSPLSAGLESPLCSPPPPGHALEPPKPTDPFRPFASPRPDSRYGERDVVSDITDMGPPKTPVSIAKNGKDLSTPVPVKIEPPPAETRAENI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01079819;
- 90% Identity
- iTF_01080655;
- 80% Identity
- -