Basic Information

Insect: Heliothis virescens
Gene Symbol: stc
Assembly: GCA_002382865.1
Location: NWSH01000227.1:179020-197305[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2 1.5e+04 -4.4 1.6 15 19 557 561 556 561 0.81

2 13 0.042 3.1e+02 1.2 1.2 2 10 589 597 589 597 0.93

3 13 4e-05 0.29 10.9 18.1 4 19 605 620 603 620 0.93

4 13 2.3e-08 0.00017 21.3 12.4 1 19 656 674 656 674 0.97

5 13 0.00014 1 9.2 12.1 1 19 715 733 715 733 0.97

6 13 1.9e-05 0.14 11.9 12.7 1 19 774 796 774 796 0.87

7 13 2 1.5e+04 -5.4 2.2 6 10 826 830 826 830 0.94

8 13 0.004 30 4.5 7.2 1 11 836 846 836 847 0.95

9 13 0.14 1e+03 -0.4 0.5 4 10 851 857 850 859 0.91

10 13 1.5e-05 0.11 12.2 16.7 3 19 865 881 853 881 0.87

11 13 0.00042 3.1 7.7 9.6 10 18 928 936 925 937 0.92

12 13 4.8e-08 0.00035 20.3 14.0 1 17 973 991 973 997 0.85

13 13 0.028 2.1e+02 1.8 10.2 1 12 1003 1014 1003 1026 0.73

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2	1.5e+04	-4.4	1.6	15	19	557	561	556	561	0.81
2	13	0.042	3.1e+02	1.2	1.2	2	10	589	597	589	597	0.93
3	13	4e-05	0.29	10.9	18.1	4	19	605	620	603	620	0.93
4	13	2.3e-08	0.00017	21.3	12.4	1	19	656	674	656	674	0.97
5	13	0.00014	1	9.2	12.1	1	19	715	733	715	733	0.97
6	13	1.9e-05	0.14	11.9	12.7	1	19	774	796	774	796	0.87
7	13	2	1.5e+04	-5.4	2.2	6	10	826	830	826	830	0.94
8	13	0.004	30	4.5	7.2	1	11	836	846	836	847	0.95
9	13	0.14	1e+03	-0.4	0.5	4	10	851	857	850	859	0.91
10	13	1.5e-05	0.11	12.2	16.7	3	19	865	881	853	881	0.87
11	13	0.00042	3.1	7.7	9.6	10	18	928	936	925	937	0.92
12	13	4.8e-08	0.00035	20.3	14.0	1	17	973	991	973	997	0.85
13	13	0.028	2.1e+02	1.8	10.2	1	12	1003	1014	1003	1026	0.73

Sequence Information

Coding Sequence: ATGTCTCAGTGGAACAACACATACGCTTACAACAACCAGTACCAAGCCTGGAACGGCGACCCGAACGTCCAATATGTTAATCAAGCCTACTACCCCAATAGGCCAGACCAAGCTAATCAGTATGTGAGCTTTAATGAGTTTATTTCTCAAATGCAAAGCAATGGTGCCCCAGCCGCTAGCAACTATAACAATGTGCAATACGAGAGTTATCCTACTAGACAATATAATTACCAGAACATGCCTGCCACCCCACACAATCCCCAGTTAGACAGCTATGGATATGCAGCAACTACTACCAACATAGCTGTCACTGAAGCATACCCAATGAATGTTCAAAATCAATACAACCCAGTGGCATCTGATCCCAGTGCTTACACAAACGCAATGATACTCAAATCTAATCTCACTCCAACAGCAACTGAATTTGTGCCAAAAAGTTCTATGATGACACCGTCGACAAGCACTCAGAACATTCCTGAATCTAGTACTGTACATGACGACAATGAATCTAGAAGTAATTATAGTAGTGTTAATGAAACTAGGAACCAATACAGTAGTGGGAATGATTCACAAAGTAACTATTCCAGTATAAATGAACCTCGAAATACCAGCAGTAGTTCTTCAGACACTAACTGGAGAGAGAGGTCACAGAACTCCCAGAAAAATAGTGAACCAATCCATAAAACTGAATCATACCACCGTCCACAAGAGCACTCTAGGAACCAAGAATCTAATGGTCGCTACCGTGATGGGCATTATCGTAATAATGAATCAAATGGTCGAAATTATGAATCAAAGAACCGTAATAAAGAATCTAATAGCCACAATCAAGAACAAGAAGATAGGCAATATGAATCAAGTAGCCGCCATCAAGATTCTAGTAGTCGTAACTATGAATCAAATAACCGTAATTATGATTCTAGTAACAAAAGGGGCCAAGGAAAATCTAATTATAAGTCAAAGAATAAAGATGATGCTCGAACCTTCTACAATAGTGCTATCAGTAAAGATAGTCAAGATGTGAGGAATGGAAGAGGGGAAGGTTCAGGACGTGGCAAGAATTGGAATGGAACCCAACGGCTTCGTGCCATGGAACGTAACAGCATGGAAGATGAACAATATGCGAATACATACTTACAAGGACGAGACGATAGAACAGAAAGAGAAAATAGAGATAGAGACAGAGCACAAGAGCGAGAAAACCGAGAGAGGGAGAGAGCACTAGAGCGCGAAAACAGAGATCGAGAAAGAGCACAAGAGCGAGAAAACAGGGAAAGAGATAGAGCATTAGAGAGAGAAAACAGGGACAGAGAGAGAGCAATGGAGCGGGAACTCCGTGACAGGGACAGGGATAATAGAGAGAGGGAACGAGAAAATAGAGAAAGGGAAAGAGAAAACAGAGAGAGAGATAGAATGTCAAAGTCTGATAATGGCCCTAGTCCGGCTCGGTCTAAGAGTAAATACAATTTTGACCAAGCAAACAAAGAGATGACCCAGCGTGAGCGCCTCTCTGAGCAGCTGGACAAGGGCACACTGGAATGCCTGGTCTGCTGTGACAGGGTGAAGCAGTTTGACCAGGTGTGGTCCTGCAGCAACTGTTACCATGTACTGCATCTCAGGTGTATTAGGAAGTGGGCGATGAGTAGTATGGTTGAGGGCAAATGGCGTTGCCCCGCCTGTCAGAATACGAACGAGGCCATCCCTACCGAATACCGCTGCATGTGCGGGGCTATGCGCGCGCCGGAGTACCAGCGCGGCGCTGCAGGGGCGCACACCTGTGGTCGCGCCTGCCGCAGAGCGAGGGCCTGTCCGCACCCCTGCACTCTGCTGTGCCATCCCGGACCCTGTCCGCCGTGTCAGGCTACTGTTGTTAAACAATGTGGTTGCGGCGCAGAGAGCCGCTCGATCCTGTGCAGCAGCAAGCTGCCTCAGGTGTGCGGACGTACCTGTGGCCGTACATTAGAGTGTGGTGTGCACACCTGTGCCAAGGACTGCCATGAGGGACCCTGCGATACCTGCACTGAGACTGTTGAACAAGTATGCTACTGCCCTGCCGCCAAGTCCCGGTCAGTGCCATGCACGGCGGAGACGGGCGGCGTCAGTAGCTGGGAGTGCGGCGACGCGTGCGGACGCGTGCTGGCGTGCGGCGCGCACGTGTGCCGCGCCAAGTGCCACGCGCCCCCCTGTCCCGCCTGCCAGCTGCTGCCGAAATATGTGCAAACTTGCCCTTGTGGGAATACGCAGTTGGCGAAAGACTCGCGCAAATCGTGCACGGATCCCATCCCGCTGTGTGGTAATATCTGCGCTAAACCTCTGAACTGCGGCCCGGCTGGAGATAAACACTTCTGCAAACTAAACTGCCATGAAGGTCCATGCCCCGAATGCCCCGACAAGACAGTACTGCAATGCCTGTGCGGGCACTCGAGCCGCGAGGTGCCGTGCGCCGACCTGCCCGCTATGTACAACAATGTTATGTGCCAAAAGAAGTGTAATAAGAAGCTGTCGTGTGGTCGTCACCGCTGCCGCACGCTGTGCTGCGCGGCGACGTCGCACCGCTGCGGCGTGGTGTGCGGCCGCACGCTGTCCTGCCAGACGCATCGCTGCGAGGAGTTCTGCCACACTGGACACTGCGCACCCTGTCCGCGCGTCAGTTTCGAGGAGCTCACATGCGAATGCGGTGCGGAGGTAATCCTACCACCTGTCCGCTGTGGAACACGCCCACCGGCATGCAGCGCTCCCTGCATCCGCGAGCGACCCTGCAAGCACCCGCCGCACCACTCGTGCCACTCCGGCGACTGTCCGCCCTGTGTCGTGCTCACTACCAAGCGCTGCCACGGTGACCATGAGGAACGCAAAACAATACCGTGTTCTCAAGAAGAGTTCTCGTGCGGGCTGCCGTGTGGCAAGCCGCTGCCATGTGGCAAACACACCTGCATCAAGACTTGTCATAAAGGACCTTGTGATACTGGCAAATGCACCCAACCGTGCATGGAGAAGCGCCCCAGCTGCGGGCACCCGTGCGCGGCGCCGTGCCACGTGGCGGGCGGCACGGCCTGCCCCAGCACGGCGCCCTGCCGCCGCCCCGTGCGCGCCACCTGCCCCTGCTCCCGCCGACACGCCGAGCGCGCATGCGCTGACAACGCAAGAGATCTAGCCAAGATGATGAGTGCTCTAGCTGCTACGAAGATGTCGGAGGGCGGGTCAGTAGACCTATCGGATGTACAGCGCCCCGGCAATATGCTTAAAACTCTCGAATGTGACGACGAGTGCCGCGTGGAAGCCCGCACACGTCAGCTGGCGCTGGCGCTGCAGATCCGCAACCCCGACGTGTCGGCCAAGCTGGCGCCGCGCTACAGCGAACACGTGCGCGCCACCGCCGCGCGCGAGCCCGCCTTCGCCAACCAGATACACGACAAGCTCACCGAGCTCGTGCAGCTCGCTAAGAAGtcgaAGCAGAAGACTCGAGCGCACTCGTTTCCGTCGATGAACTGGCAGAAGCGTCAGTTCATACACGAGCTGTGTGAGCACTTCGGCTGCGAGAGCGTCGCCTACGATGCCGAGCCGAACCGAAACGTTGTAGCCACTGCTGATAGGGAAAAGTCATGGCTACCGGCGATGAGCCTGCTGGCAGTGCTGGCACGAGAAGCAGGCAAGCGGCGCGTGCCCGGCCCCGTGCTGcgcgccccccccccccccccccccccccccccccccccccccccccNccccgccgcgcccgcgccctcCCACTCCACACAGCACTCCGTCACCAAATCTACAGGTGGTTGGGCAACACTGACGTCCACGAACGCTTGGGCCGCGCGCAGCCAGCCGAAGCCGCAGCCGGCAGCAGCGCCACCTGCCGAGAAGATCGACTACTTCGACAATCCGCCTGACAACTAG
Protein Sequence: MSQWNNTYAYNNQYQAWNGDPNVQYVNQAYYPNRPDQANQYVSFNEFISQMQSNGAPAASNYNNVQYESYPTRQYNYQNMPATPHNPQLDSYGYAATTTNIAVTEAYPMNVQNQYNPVASDPSAYTNAMILKSNLTPTATEFVPKSSMMTPSTSTQNIPESSTVHDDNESRSNYSSVNETRNQYSSGNDSQSNYSSINEPRNTSSSSSDTNWRERSQNSQKNSEPIHKTESYHRPQEHSRNQESNGRYRDGHYRNNESNGRNYESKNRNKESNSHNQEQEDRQYESSSRHQDSSSRNYESNNRNYDSSNKRGQGKSNYKSKNKDDARTFYNSAISKDSQDVRNGRGEGSGRGKNWNGTQRLRAMERNSMEDEQYANTYLQGRDDRTERENRDRDRAQERENRERERALERENRDRERAQERENRERDRALERENRDRERAMERELRDRDRDNRERERENRERERENRERDRMSKSDNGPSPARSKSKYNFDQANKEMTQRERLSEQLDKGTLECLVCCDRVKQFDQVWSCSNCYHVLHLRCIRKWAMSSMVEGKWRCPACQNTNEAIPTEYRCMCGAMRAPEYQRGAAGAHTCGRACRRARACPHPCTLLCHPGPCPPCQATVVKQCGCGAESRSILCSSKLPQVCGRTCGRTLECGVHTCAKDCHEGPCDTCTETVEQVCYCPAAKSRSVPCTAETGGVSSWECGDACGRVLACGAHVCRAKCHAPPCPACQLLPKYVQTCPCGNTQLAKDSRKSCTDPIPLCGNICAKPLNCGPAGDKHFCKLNCHEGPCPECPDKTVLQCLCGHSSREVPCADLPAMYNNVMCQKKCNKKLSCGRHRCRTLCCAATSHRCGVVCGRTLSCQTHRCEEFCHTGHCAPCPRVSFEELTCECGAEVILPPVRCGTRPPACSAPCIRERPCKHPPHHSCHSGDCPPCVVLTTKRCHGDHEERKTIPCSQEEFSCGLPCGKPLPCGKHTCIKTCHKGPCDTGKCTQPCMEKRPSCGHPCAAPCHVAGGTACPSTAPCRRPVRATCPCSRRHAERACADNARDLAKMMSALAATKMSEGGSVDLSDVQRPGNMLKTLECDDECRVEARTRQLALALQIRNPDVSAKLAPRYSEHVRATAAREPAFANQIHDKLTELVQLAKKSKQKTRAHSFPSMNWQKRQFIHELCEHFGCESVAYDAEPNRNVVATADREKSWLPAMSLLAVLAREAGKRRVPGPVLRAPPPPPPPPPPPPPXPAAPAPSHSTQHSVTKSTGGWATLTSTNAWAARSQPKPQPAAAPPAEKIDYFDNPPDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00809740;
90% Identity: iTF_00784883;
80% Identity: -