Basic Information

Insect: Helicoverpa zea
Gene Symbol: stc
Assembly: GCA_002150865.1
Location: KZ118119.1:10077-28700[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2 1.9e+04 -4.4 1.6 15 19 559 563 558 563 0.81

2 13 0.042 4e+02 1.3 1.2 2 10 591 599 591 599 0.93

3 13 3.9e-05 0.37 10.9 18.1 4 19 607 622 605 622 0.93

4 13 3.5e-08 0.00033 20.7 13.2 1 19 658 676 658 676 0.97

5 13 0.00014 1.3 9.2 12.1 1 19 717 735 717 735 0.97

6 13 1.9e-05 0.18 12.0 12.7 1 19 776 798 776 798 0.87

7 13 2 1.9e+04 -5.4 2.2 6 10 828 832 828 832 0.94

8 13 0.004 38 4.5 7.2 1 11 838 848 838 849 0.95

9 13 0.14 1.3e+03 -0.4 0.5 4 10 853 859 852 861 0.91

10 13 1.5e-05 0.14 12.2 16.7 3 19 867 883 855 883 0.87

11 13 0.00041 3.9 7.7 9.6 10 18 930 938 927 939 0.92

12 13 4.7e-08 0.00045 20.3 14.0 1 17 975 993 975 999 0.85

13 13 0.016 1.5e+02 2.6 9.2 1 12 1005 1015 1005 1028 0.77

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2	1.9e+04	-4.4	1.6	15	19	559	563	558	563	0.81
2	13	0.042	4e+02	1.3	1.2	2	10	591	599	591	599	0.93
3	13	3.9e-05	0.37	10.9	18.1	4	19	607	622	605	622	0.93
4	13	3.5e-08	0.00033	20.7	13.2	1	19	658	676	658	676	0.97
5	13	0.00014	1.3	9.2	12.1	1	19	717	735	717	735	0.97
6	13	1.9e-05	0.18	12.0	12.7	1	19	776	798	776	798	0.87
7	13	2	1.9e+04	-5.4	2.2	6	10	828	832	828	832	0.94
8	13	0.004	38	4.5	7.2	1	11	838	848	838	849	0.95
9	13	0.14	1.3e+03	-0.4	0.5	4	10	853	859	852	861	0.91
10	13	1.5e-05	0.14	12.2	16.7	3	19	867	883	855	883	0.87
11	13	0.00041	3.9	7.7	9.6	10	18	930	938	927	939	0.92
12	13	4.7e-08	0.00045	20.3	14.0	1	17	975	993	975	999	0.85
13	13	0.016	1.5e+02	2.6	9.2	1	12	1005	1015	1005	1028	0.77

Sequence Information

Coding Sequence: ATGTCTCAGTGGAACAACACATACGCTTACAACAACCAGTACCAAGCCTGGAACGGCGACCCGAACGTTCAATATGTTAACCAAGCCTACTACCCCAATAGACCTGACCAACCTAATCAGTATGTGAGCTTTAATGAGTTTATTTCTCAAATGCAAAATAATGGTGCCCCAACTGCTAGCAACTATAACAATGTGCAATACGAGAGTTATCCTACTAGACAATATAATTACCAGAACATGCCTGCCACCCCACACAATCCCCAGTTAGACAGCTATGGATATGCAGCAACCGCTACAAACCTAGCTGGCACTGAAGCATACCCAATGAATGTACAAAATCAATACAACCCAGTGGCATCTGATCCCAGTGCTTACACAAACGCTATGATACTCAAATCTAATCTCACTCCAACAGCTACTGAATTTGTGCCAAAAAGTTCTATGATGACACCGTCAACAAGCACTCAGAACATTCCTGAATCTAGTACTGTACATGACGACAATGAATCTAGAAGTAATTATAGTAATGTTAATGAATCTAGGAATCACTACAGTAGTGGGAATGATCCACAAACTAATTATTCTAGTAATAATGAACCTCGAAATACCAACAGTAGTTCATCAGACACTAACTGGAGAGAGAGGTCACAGAACTCCCAGAAAAATGAAATCCATAAATCTGAATCATACCACCGTCCACAAGAGCACTCTAGGAACCAAGAATCTAATGGTCGCTACCGTGATGGGCATTATCGTAATAATGAATCAAATGGTCGAAATTACGAATCAAAGAGCCGTAATCATGAATCTAATAACCGCAATCAGGACCAAGAAGATAGGCAATATGAATCAAATAGCCGCCACCAAGATTCTAGTAGTCGCAACTATGAGTCAAATAATCGTAATTATGATTCAAGTAACAAAAGGGGCCAAGGAAAATCTAATTATAAGTCAAAGAATAAAGATGATGCTCGTACCTTCTACAATAGCGCTATCAGTAAAGACAGTCAAGATGTGAGGAATGGCAGAGGAGAAGGTTCAGGTCGGGGTAAGAATTGGAATGGAACCCAACGACTTCGTGCAATGGAACGCAATAGCACAGAAGATGAACAATATGCTAATACATACTTACAGGGAAGAGATGAGAGGTCAGATAGAGATAGGGAAAGAGAAAATCGAGATCGAGATAGAGCACAGGAAAGAGAAAACCGGGAGAGGGAAAGAGCACTTGAGAGAGAGACCAGAGACAGAGATCGAGCACTGGAGCGAGAAAACAGAGAACGAGACAGAGCATTAGAACGGGAAAACAGGGACAGAGAGAGAGCAATGGAGCGGGAACTCCGAGACAGAGAAAGAGATAATAGAGAGAGGGAACGAGAAAATAGAGAAAGGGAAAGGGAAAACAGAGAAAGAGATAGGATGTCTAAGTCTGATAATGGACCCAGTCCTGCTCGGtctaaaagtaaatacaattttgatcaAGCGAACAAAGAGATGACCCAGCGTGAACGTCTCACTGAGCAGCTGGATAAGGGCACGCTGGAATGCCTGGTTTGCTGCGACAGGGTCAAGCAGTTTGACCAGGTGTGGTCTTGCAGCAACTGTTACCATGTGCTGCATCTCAGGTGTATTAGGAAGTGGGCCATGAGTAGTATGGTTGAGGGCAAATGGCGTTGCCCAGCCTGCCAGAACACAAACGAGGCCATTCCTACGGAGTACCGCTGCATGTGCGGGGCTGTGCGAGCGCCTGAGTACCAGCGCGGCGCCGCAGGGGCGCACACCTGTGGTCGCGCCTGTCGTAGAGCGAGGGCCTGTCCGCACCCCTGCACGCTGTTGTGCCATCCGGGTCCCTGTCCGCCGTGTCAGGCTACTGTTGTTAAGCAATGTGGTTGCGGCGCCGAGAGCCGCTCGATCCTCTGCAGCAGCAAGTTACCTCAAGTGTGCGGGCGTACCTGTGGCCGGACCCTGGAGTGTGGCGTGCATACCTGTACTAAAGACTGCCACGAAGGACCCTGCGATACCTGTACTGAGACTGTCGAACAAGTATGCTACTGTCCCGCCGCCAAGTCCCGGTCGGTTCCTTGCACCGCAGAAACGGGCGGCGTCAGTAGCTGGGAGTGCGGCGACGCGTGCGGACGCGTGCTGGCGTGTGGCGCACACGTGTGTCGCGCTAAGTGTCACGCGCCGCCCTGTCCTGCTTGCCAGCTGCTGCCCAAACATGTGAAGACTTGCCCTTGTGGGAATACGCAGTTGGCGAAAGACTCGCGCAAATCGTGCACGGATCCCATCCCGCTGTGCGGTAATATCTGCGCCAAGCCTCTGAACTGCGGCCCGGCTGGAGACAAACACTTCTGCAAACTTAACTGCCATGAAGGTCCCTGCCCCGAGTGCCCCGACAAAACAGTTCTGCAATGTCTGTGCGGGCACTCCAGCCGCGAGGTGCCCTGCGCCGACCTGCCCGCTATGTACAACAATGTTATGTGCCAAAAGAAGTGTAACAAGAAGTTATCCTGCGGTCGTCACCGCTGCCGCACGCTGTGCTGCGCGGCGACGTCGCACCGCTGCGGCGTGGTGTGCGGCCGCACGCTGTCCTGCCAGACGCACCGCTGCGAGGAGTTCTGCCACACCGGACACTGTGCTCCCTGTCCGCGCGTCAGTTTCGAAGAACTTACATGCGAATGCGGTGCCGAAGTCATCCTACCACCTGTCCGCTGTGGGACTAGACCTCCCGCCTGCAGCGCCCCCTGCATCCGCGAGCGTCCCTGCAAGCATCCACCACACCACTCGTGCCACTCCGGCGACTGTCCGCCCTGTGTCGTGCTCACTACCAAGCGCTGCCACGGTGACCATGAGGAACGCAAAACAATTCCTTGTTCTCAAGAAGAGTTCTCGTGCGGGTTGCCGTGCGGTAAGCCACTGCCTTGCGGCAAACACACCTGCATCAAGACTTGTCATAAAGGACCTTGTGATACTGGCAAGTGCACTCAACCTTGCATGGAGAAGCGTCCCAGCTGCGGTCACCCTTGCGCAGCACCGTGCCACGTGGCGGCCGGCACATCCTGCCCCAGCACGGCGCCGTGCCGCCGCCCCGTGCGGGCCACCTGCCCCTGTAACCGCAGGCACGCGGAGCGAGCTTGCGCGGATAATGCACGGGATTTAGCTAAGATGATGAGTGCTCTAGCTGCCACAAAGATGTCGGAAGGCGGGTCAGTAGACCTATCAGATGTACAGCGTCCCGGCAACATGCTTAAAACTCTAGAATGTGACGATGAATGCCGCGTCGAAGCCCGCACCCGCCAACTAGCATTAGCTCTTCAAATCCGCAACCCCGACGTGTCGGCGAAACTGGCGCCGCGGTACAGCGAACATGTTCGAGCTACGGCTGCAAGGGAACCTGCTTTTGCCAACCAGATACACGATAAACTTACTGAGCTCGTGCAGCTTGCTAAGAAGTCGAAACAGAAGACTCGAGCGCACTCGTTCCCATCGATGAACTGGCAGAAGCGTCAGTTCATACACGAGCTGTGCGAACACTTCGGTTGTGAGAGCGTCGCCTACGATGCCGAGCCCAATAGGAACGTTGTAGCCACTGCTGATAAAGAGAAGTCGTGGCTGCCAGCAATGAGTGTATTGGAGGTGTTGGCTCGAGAGGCCGGCAAGCGGCGCGTGCCCGGCCCCGTGctgcgcgcgccgcccgccgccgcgcccgcgcccgcgcccgcgcactCCACGCAGCACGCGCCCTCCAAATCAACGGGCGGCTGGGCGACACTCACGTCCACGAACGCTTGGGCGGCCCGCAGCCAGCCGAAGCCACAGCCGGCAGCCGCGCCACCCGCCGAGAAGATCGACTACTTCGACAACCCGCCTGACAACTAG
Protein Sequence: MSQWNNTYAYNNQYQAWNGDPNVQYVNQAYYPNRPDQPNQYVSFNEFISQMQNNGAPTASNYNNVQYESYPTRQYNYQNMPATPHNPQLDSYGYAATATNLAGTEAYPMNVQNQYNPVASDPSAYTNAMILKSNLTPTATEFVPKSSMMTPSTSTQNIPESSTVHDDNESRSNYSNVNESRNHYSSGNDPQTNYSSNNEPRNTNSSSSDTNWRERSQNSQKNEIHKSESYHRPQEHSRNQESNGRYRDGHYRNNESNGRNYESKSRNHESNNRNQDQEDRQYESNSRHQDSSSRNYESNNRNYDSSNKRGQGKSNYKSKNKDDARTFYNSAISKDSQDVRNGRGEGSGRGKNWNGTQRLRAMERNSTEDEQYANTYLQGRDERSDRDRERENRDRDRAQERENRERERALERETRDRDRALERENRERDRALERENRDRERAMERELRDRERDNRERERENRERERENRERDRMSKSDNGPSPARSKSKYNFDQANKEMTQRERLTEQLDKGTLECLVCCDRVKQFDQVWSCSNCYHVLHLRCIRKWAMSSMVEGKWRCPACQNTNEAIPTEYRCMCGAVRAPEYQRGAAGAHTCGRACRRARACPHPCTLLCHPGPCPPCQATVVKQCGCGAESRSILCSSKLPQVCGRTCGRTLECGVHTCTKDCHEGPCDTCTETVEQVCYCPAAKSRSVPCTAETGGVSSWECGDACGRVLACGAHVCRAKCHAPPCPACQLLPKHVKTCPCGNTQLAKDSRKSCTDPIPLCGNICAKPLNCGPAGDKHFCKLNCHEGPCPECPDKTVLQCLCGHSSREVPCADLPAMYNNVMCQKKCNKKLSCGRHRCRTLCCAATSHRCGVVCGRTLSCQTHRCEEFCHTGHCAPCPRVSFEELTCECGAEVILPPVRCGTRPPACSAPCIRERPCKHPPHHSCHSGDCPPCVVLTTKRCHGDHEERKTIPCSQEEFSCGLPCGKPLPCGKHTCIKTCHKGPCDTGKCTQPCMEKRPSCGHPCAAPCHVAAGTSCPSTAPCRRPVRATCPCNRRHAERACADNARDLAKMMSALAATKMSEGGSVDLSDVQRPGNMLKTLECDDECRVEARTRQLALALQIRNPDVSAKLAPRYSEHVRATAAREPAFANQIHDKLTELVQLAKKSKQKTRAHSFPSMNWQKRQFIHELCEHFGCESVAYDAEPNRNVVATADKEKSWLPAMSVLEVLAREAGKRRVPGPVLRAPPAAAPAPAPAHSTQHAPSKSTGGWATLTSTNAWAARSQPKPQPAAAPPAEKIDYFDNPPDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00809740;
90% Identity: iTF_00786453;
80% Identity: -