Hpel019690.3


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Heliothis peltigera
Gene Symbol
-
Assembly
GCA_958496145.1
Location
OY292350.1:2453232-2464978[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.11 7.3 7.6 1.2 1 23 232 254 232 254 0.95
2 16 0.16 11 7.1 0.0 3 23 284 305 282 305 0.93
3 16 0.69 45 5.1 0.2 6 23 330 348 326 348 0.94
4 16 0.00034 0.022 15.6 2.6 2 23 354 376 353 376 0.95
5 16 0.0017 0.11 13.4 1.1 1 23 381 404 381 404 0.96
6 16 0.17 11 7.0 0.4 2 23 407 429 406 429 0.95
7 16 0.059 3.9 8.5 2.1 2 21 436 455 435 456 0.93
8 16 0.0051 0.33 11.9 0.5 1 23 516 539 516 539 0.93
9 16 0.024 1.6 9.7 0.3 3 23 568 589 566 589 0.94
10 16 0.074 4.8 8.2 0.9 2 23 612 635 611 635 0.95
11 16 0.00055 0.036 14.9 0.6 3 20 642 659 640 663 0.90
12 16 0.0045 0.29 12.0 0.4 1 23 668 691 668 691 0.97
13 16 0.00085 0.055 14.3 0.4 2 23 697 719 697 719 0.94
14 16 0.00067 0.044 14.6 4.8 1 23 723 746 723 746 0.97
15 16 0.00018 0.011 16.4 0.6 2 23 753 774 752 774 0.96
16 16 0.0049 0.32 11.9 2.3 1 23 780 802 780 802 0.97

Sequence Information

Coding Sequence
ATGGAGTTTGACGAGATTGTGGTGAAGGAGAGCCCCGGGCTTTGCCGGTGCTGTCTCTCCGAAGGGTGTTACAAAGACTTGGGTACCGAGTACACTTGGATGAATGAAACAGAGGTTTATGCCGATATGCTGTTGGAATGTTTCGATATTAGTATTACTCAACACAATGACGGTCCAAATGGGCCCAACCGGCTTATTTGCGAAGTCTGCATCACTCGGCTTCGAGACGCATgtaattttaagaaacaaGTCCTGGATTCAGAGAAGAAATTCATTGACATGATGGGAAGGGGGGAATTTAGGCctaaaaTGCTTATCTACCAGACGCAGATGAAgtgtgaggacacggtggaggcCCCTATTGAGGAAGCTGACGTTGAATACTTAGAAGATGATATCGATTTTGCTGATGTTTCAgaagaattaataaaagatGAAACAGAACCGTCGGTGTCAGACGTTACGGTGGCCACATTGCCGGTCAAAGGCAAGCGTGGTAGACCCCGGAAGAATGCTGTCAAGCCAGAAAAACGACCCAAGGTTGATGATAAAGCCAAGACTTCGAAAGCCGTTGCTAAAGGTAATAAAGCGAGGAAATTGAAGGGGTCCGAGTCTTCCTCGATGCGGAGACGTCGGAACCTCCAAATTCTTTTCAACAACACTACTATTATACCGTTTAAATGGCGCGGCAAGTATCTCTGCTTCTATTGCAGCAAAGATATCGCAGAGTATACGGAGCTAAGGAAACATACAAAGTCCCACGGCAATTGCTCCATAAAAGACCATTCTCTAAAAGTTCTGAAAGGTGGTCAAAACATGGAgataaaaattgatatttcGAATATTGCTTGCGAAATCTGTACAGAGCCTTTTCCTTCTTTCGATGAGGTTGTCACCCATTTGTTTGTTAAACACAAACTTGAATACGATAAAGGAGTAGACATGGCTATAGAAGAATATAAGCTTATTGATCTCAGTTGTATCGCATGTGACGAGAAATTCACGTACTTCGGATACCTAGTCTCACACGTTAACAATAATCACCCGAAAAACTGTCTCATATGCGATAAATGCAatcaaaaattcaataaaaagagAGACTTGTTCTCTCATATGAAGAACTATCACCGCGAGGGTGGATACCAATGTGAGTTGTGCCCTCAAACGTTCAGctcattaaacattttaagaaaACACAGAAACAATAGGCATTTGACCAGGTGTAATATCTGTCACCTGAAGCTACCGTCAGCGGCTTTGAAACAAAAGCACATCGAAATAGAACATCCAGATGATGGATCCCTACAATGTGATACATGTTTTAAAGAATTTCACACAAAACAAGGCCTTAGGATGCATAACAGAAAGTGCAAAGGCGAAGAGATTTTCGAAATCGCCATCAAGAAAGAAGAATACGTGGCTATGGACCTCGACCAGAATTACGACGATCAAGTCAAAAGACCGAGCGTCAAGCAAATCAGGGAAAATATAGTTATAGTCATTAATATGTCTACGGCGAtaccttttaatttttataagaataagtTTAACTGTTTTTACTGTTCCAAAGATTTTCCCGATTCGGATCTGATGAGGGAACATACGGTTATGGAACACCCTGTGTGTGATGTCAAAGAGAAATGTATACGAAAGTGTAGGGAATCAGTCGCTTGCGTTAAAATCGATGTTTCGTCTCTAGCTTGTAAGATTTGCTTCGAATCGATTACCGATCTCGAGCATCTAATCGATCACCTAATCTCAAAGCATAATGCGAATTACGATAAATCGATTACGACCTGTCTACAACCGTATAAACTAATAAAGGACCATATGGTATGCCCACATTGCCCCGACGAAGAATTTCGTTTCTTCGGCACTTTACTTAAAcatatgaataataaacacacgaacaataatattatttgcgtATATTGCGGTCAGACTTTTCGTAGGGACCAAAATTTACGAGTTCATATTTGGCGTCACCATAGAGATGGTAGGTTTAAATGTAACATTTGCGGTGCTGAATGCAAGATCCCTTCACGTTTGTACATGCACATGGCTAGGGCGCACGGCGTGAAGGCCGCGAAGTGTCCAAAATGTTCGGAATCTTTCGCCACGCAGTATCTAAGACAGAAACATCTGATAGAAGCCCACGATTCGGGACATAAGTGCTCTTTTTGTGGGAAGCTTTTCACTAGAAATTCCTTCATGAGAGACCATGTAAGGAGAACGCATTTAAAGGAGAAAAACGTGGAATGTTCCATCTGCAACATGAAGTTcttcaacaatattttattacgaagGCATATGGTTAAACATAGTGGTGAAAAAAATTTTCACTGCGATGTCTGCGGAGAGAGGTTTTTCTGGCGGAAAAGTTTGAGAACGCATATGGCTAGgcataataaacatttgaatcCGGTGTAG
Protein Sequence
MEFDEIVVKESPGLCRCCLSEGCYKDLGTEYTWMNETEVYADMLLECFDISITQHNDGPNGPNRLICEVCITRLRDACNFKKQVLDSEKKFIDMMGRGEFRPKMLIYQTQMKCEDTVEAPIEEADVEYLEDDIDFADVSEELIKDETEPSVSDVTVATLPVKGKRGRPRKNAVKPEKRPKVDDKAKTSKAVAKGNKARKLKGSESSSMRRRRNLQILFNNTTIIPFKWRGKYLCFYCSKDIAEYTELRKHTKSHGNCSIKDHSLKVLKGGQNMEIKIDISNIACEICTEPFPSFDEVVTHLFVKHKLEYDKGVDMAIEEYKLIDLSCIACDEKFTYFGYLVSHVNNNHPKNCLICDKCNQKFNKKRDLFSHMKNYHREGGYQCELCPQTFSSLNILRKHRNNRHLTRCNICHLKLPSAALKQKHIEIEHPDDGSLQCDTCFKEFHTKQGLRMHNRKCKGEEIFEIAIKKEEYVAMDLDQNYDDQVKRPSVKQIRENIVIVINMSTAIPFNFYKNKFNCFYCSKDFPDSDLMREHTVMEHPVCDVKEKCIRKCRESVACVKIDVSSLACKICFESITDLEHLIDHLISKHNANYDKSITTCLQPYKLIKDHMVCPHCPDEEFRFFGTLLKHMNNKHTNNNIICVYCGQTFRRDQNLRVHIWRHHRDGRFKCNICGAECKIPSRLYMHMARAHGVKAAKCPKCSESFATQYLRQKHLIEAHDSGHKCSFCGKLFTRNSFMRDHVRRTHLKEKNVECSICNMKFFNNILLRRHMVKHSGEKNFHCDVCGERFFWRKSLRTHMARHNKHLNPV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00071771;
90% Identity
iTF_00783814; iTF_00172103;
80% Identity
-