Hzea011446.1
Basic Information
- Insect
- Helicoverpa zea
- Gene Symbol
- GATA-B_1
- Assembly
- GCA_002150865.1
- Location
- KZ116994.1:40821-63266[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.5e-18 2.2e-14 52.8 3.9 1 34 286 318 286 320 0.97 2 2 2.1e-17 5e-14 51.7 7.2 1 34 339 371 339 373 0.97
Sequence Information
- Coding Sequence
- ATGCTGCACGAGACATGGCCCCATGCGTGGCATAAGACGGAATCCTTCGAGCTGGACGCGCTTTTTGCAGAGGTCAACAACAATTGCCTGAAAGAAGGCGAGGCGGAGTGCGGCGCGGAGGGCAGCGGCGGCGACGCGGAGAGCCCGCCCCCCCTGCCGGCGTTCGGCTACGCCCCCGGCGCGCTGTCGCCGTCCCACTCGCGCAGCTACCAGGAGCTGCGGCCGGCACACGCGCGCGACATGCAGGCCTACGCGCACCTCGAGGAGGTGTTCAAGCCGGGCGGCGGTTCCACGGACGGCGCCTACCTGCGCCGCAGCAGCCCCGACCTCAGCCCGTCGCCCGAGCGCCGCGACGACTTCCGCGCGCACTACGACtacgcgcccgcgccgccgccctaCTCGCACGACCACCACCACCACGTCGACGGAGGAGGCGGCGGAGGAGGGGGTGGCGCAGTGTACTCGCGCTGCGCGTACGCAGGCGGCTCGCCGTACTTCGGCAACGGCACGGAGATCAGCACACAACCTCAGATTTGGCCGTCCAGCGCAGGCGGGTCGCCCAGCTACGGCGGCGGCGTGGTGCTAGGCGAGGAGTACGCGGAGGCGGCGGGCGCGGAGGGTGCGGGAGGCGCGGGGGGCGGAGGGGGCGCGGGCGGCTCGCTGCCGGCCTTCAGCGCGCGCTTCGGCGGCGCCTTCGCGTGCGCCACCTCGCGCCCCAACACCGTGTacggcgccgcgccgccctACTCGCACCAGGAAGTGTGGAACCTTGAGAGCAATCGCCGACCGCAAATGTCAGCGGCTGCTAGTCTTTCTGCCATCGAAATGGCGGAGTTTTTCACGGAGGGGCGCGAGTGCGTGAACTGCGGCGCCATCCACACGCCGCTGTGGCGTCGCGACGGCACCGGCCACTACCTGTGCAACGCGTGCGGCCTCTACAACAAGATGAACGGCATGAACCGGCCGCTGAAGCAGCCGCGGCGGCTGATGGGCACGAAGCGGCCGGGCATGTCGTGCACCAACTGCCAGACCACGACGACGTCGCTGTGGCGGCGCAATTCGCTGGGCGAGACCGTGTGCAACGCGTGCGGCCTCTACTACAAGCTGCACAACATCAACCGCCCGCTCGCCATGAAGAAGGACTCCATACAGaCGAGAAAGAGGAAGccaaaaaatagtataaaagcAGAACGAAGTATCAAGGCGTCCGTGCAGCGCGCCGTCACGTCTTCGGGCGTGAAGATCGAGAACCTATTGGACAGCGGCGCGGCGGCCGGCAGCGGCGCGCGCTCGCCGCTCTCGCTCAACTACTACGTGCAGCACGCGCTCAAGGTGGAGGAGCCGCCGCCCGCGCACTCAGCGCACGCCGCGCACGCGCCGCACGCGCCGCACGTGACGCACGCCGCGCACGCGCAGCACGCGCACGCGCCCCACGCGCTCTACGACGAGGAGTATCGGCGCGCGGCCGACGAGCGCCTGGAGCGGCCCACCGTCGTGTCCATGGGCAGCTGA
- Protein Sequence
- MLHETWPHAWHKTESFELDALFAEVNNNCLKEGEAECGAEGSGGDAESPPPLPAFGYAPGALSPSHSRSYQELRPAHARDMQAYAHLEEVFKPGGGSTDGAYLRRSSPDLSPSPERRDDFRAHYDYAPAPPPYSHDHHHHVDGGGGGGGGGAVYSRCAYAGGSPYFGNGTEISTQPQIWPSSAGGSPSYGGGVVLGEEYAEAAGAEGAGGAGGGGGAGGSLPAFSARFGGAFACATSRPNTVYGAAPPYSHQEVWNLESNRRPQMSAAASLSAIEMAEFFTEGRECVNCGAIHTPLWRRDGTGHYLCNACGLYNKMNGMNRPLKQPRRLMGTKRPGMSCTNCQTTTTSLWRRNSLGETVCNACGLYYKLHNINRPLAMKKDSIQTRKRKPKNSIKAERSIKASVQRAVTSSGVKIENLLDSGAAAGSGARSPLSLNYYVQHALKVEEPPPAHSAHAAHAPHAPHVTHAAHAQHAHAPHALYDEEYRRAADERLERPTVVSMGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00786437; iTF_01488205; iTF_00446771; iTF_00426014; iTF_01535495;
- 90% Identity
- -
- 80% Identity
- -