Tni003490.1
Basic Information
- Insect
- Trichoplusia ni
- Gene Symbol
- GATA-B_1
- Assembly
- GCA_003590095.1
- Location
- NC:11606143-11626372[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.4 3.4e+03 -2.5 0.1 4 10 10 16 9 18 0.84 2 3 7.6e-18 1.9e-14 52.7 3.9 1 34 291 323 291 325 0.97 3 3 1.7e-17 4.1e-14 51.6 7.2 1 34 360 392 360 394 0.97
Sequence Information
- Coding Sequence
- ATGTTGCACGAGACGTGGCCCATCGCGTGCCACAAGACCGAGACCTTCGAGCTGGACGCCTTGTTCGCAGAAGTCAACAACAACTATTTAAAAGAGGGCGAGGCGGAGTGCGGCGCGGAGGGCAGCGGAGACGCGGAGAGCCCGCCCCCCCTGCCGCCGTTCGGCTACGCCCACCCGGGCGCGCTGTCGCCGTCCCACTCGCGCAGCTACCAGGAGCTGCGGCCGGCGGCACACGCGCGCGACATGCAGGCCTACGCGCACCTCGAGGAGGTGTTCAAGCCGGGCACGCCGGGCGCCGGCTCCACGGACGGCGTGTACCTGCGCCGCAGCAGCCCCGACCTCAGCCCCTCGCCGGAGCGCCGCGACGACTTCCGCGCCGTGCACTACGACCAGTACccgccggcgcccgcgccgccgccctaCTCCCACGACCATCACCATCACGTCGACGGTAGCGGTGGAGGAGGCGGGGGCGGTACTGTATACTCACGCTGCGCGTACGCAGCTGGATCACCTtacttcggtaatggcgccgaGATCGCCACACAACCTCAAATATGGAACTCTAGTGCAGGCGGCTCGCCCAGCTACGGAGGCTCGGGCGGCGGCGTGGTGCTGGGCGAGGAGTACGCAgagggcgcggggggcgcggagggcgcgggcgggggctcGCTGCCCGCCTTCAGCGCGCGCTTCGGCGGCGCCTTCGCGTGCGCCACCTCGCGCCCCAACACCGTGTACGGCGCCGCCGTGCCGCCCTACTCGCACCAGGAGGTGTGGAACTTGGAAAGTAATCGTCGACCACAGCTGTCCGCTGCTGCCAGTCTCTCTGCCATCGACGTGGCGGAGTTTTTCACGGAGGGGCGTGAGTGCGTGAACTGCGGCGCCATCCACACGCCGCTGTGGCGTCGCGACGGCACCGGCCACTACCTGTGCAACGCGTGCGGGCTCTACAACAAGATGAACGGCATGAACCGGCCGCTGAAGCAGCCGCGGCGGCTGGTACGTCAGCGCGTcgccgcgccgcacgcgcccgcGCACGCGCACGACATGGGCACCAAGCGGCCGGGCATGTCGTGCACCAACTGCCAGACCACGACCACGTCGCTGTGGCGCCGCAACTCGCTCGGCGAGACCGTCTGCAACGCGTGCGGCCTCTACTACAAGCTGCACAACATCAACCGCCCGCTCGCCATGAAGAAGGATTCCATACAGacaaGGAAGCGAAAACCGAAGAACAGCATAAAAGCGGAGCGAAGTATCAAGACTGCTGTGCAGCGCACCATCACGTCCGGCGTCAAGATCGAGAATCTGTTGGAGACTGGCtcgggcggcggcagcggcgcgcGCTCTCCGCTGGCGCTCAACTACTACGTGCAGCCGCACCCGCTGAAGCTGGAGGAGCCGCCGCCGGCGCACAGCGCGCACGgcccgcacgcgccgcacgcgccgcacgcgccgcacgcgctgccgcacgcgcacgccgcgcacccgcacgccgcgcacgcgcacgcgctcTACGACGACGAGTACCGGCGCTCCGCCGACGAGCGCGTCGAGCGCCCCACCGTCGTGTCGCTGGGCAGCTGA
- Protein Sequence
- MLHETWPIACHKTETFELDALFAEVNNNYLKEGEAECGAEGSGDAESPPPLPPFGYAHPGALSPSHSRSYQELRPAAHARDMQAYAHLEEVFKPGTPGAGSTDGVYLRRSSPDLSPSPERRDDFRAVHYDQYPPAPAPPPYSHDHHHHVDGSGGGGGGGTVYSRCAYAAGSPYFGNGAEIATQPQIWNSSAGGSPSYGGSGGGVVLGEEYAEGAGGAEGAGGGSLPAFSARFGGAFACATSRPNTVYGAAVPPYSHQEVWNLESNRRPQLSAAASLSAIDVAEFFTEGRECVNCGAIHTPLWRRDGTGHYLCNACGLYNKMNGMNRPLKQPRRLVRQRVAAPHAPAHAHDMGTKRPGMSCTNCQTTTTSLWRRNSLGETVCNACGLYYKLHNINRPLAMKKDSIQTRKRKPKNSIKAERSIKTAVQRTITSGVKIENLLETGSGGGSGARSPLALNYYVQPHPLKLEEPPPAHSAHGPHAPHAPHAPHALPHAHAAHPHAAHAHALYDDEYRRSADERVERPTVVSLGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00784863;
- 90% Identity
- -
- 80% Identity
- -