Basic Information

Gene Symbol
GATA-B
Assembly
GCA_963555695.1
Location
OY743144.1:696565-719503[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.1e-17 7.5e-14 52.7 3.9 1 34 293 325 293 327 0.97
2 2 6.2e-17 4.2e-13 50.4 6.5 1 34 360 392 360 394 0.97

Sequence Information

Coding Sequence
ATGCTGCACGAAACATGGCCCAATGCGTGGCATAAGACAGAATCCTTCGAGTTGGACGCGCTGTTTGCAGAGGTCAACAACAATTGTTTGAAAGAGGGCGAGGCGGAGTGCGGCGCGGAGGGCAGCGGCGGCGACGCGGAGAGCCCGCCCCGCCTGCCGCCGTTCGGTTACGCCCACCCCGCGCTGTCGCCGTCCCACTCGCGCAGCTACCAGGAGCTGCGGCCGGCGGCGGCACACGCGCGCGACATGCAGGCCTACGCGCACCTCGAGGAGGTGTTCAAGCCGGGCACGCCGGGCGCCGCCGGCTCCACGGACGGCGTGTACCTGCGCCGCAGCAGCCCCGACCTCAGCCCTTCGCCGGAGCGCCGCGAAGACTTCCGCCACTACGAGCCctacgcgcccgccgcgccgccgccctaCTCGCACGACCACCACCACCACGTCGACGGTAGTGGCGGCGGAGGAGGCGGTGGGGCGGTGTACTCGCGCTGCGCGTACGCAGCCGGCTCGCCGTACTTCGGCAACGGTGCCGAGATCACCTCACAGTCGCAGATCTGGGCCTCCAGCGCAGGCGGTTCCCCGAACTACGGCGGCGGTGGAGTGGTGCTGGGCGAGGAGTACGCGGAGGGCGTCGCGGAAGGGGGCGGCGGAGGCGCTGGCGGCGGCTCGCTGCCAGCCTTCAGCGCGCGCTTCGGCGGCGCCTTCGCCTGCGCCACGTCGCGCCCCAACACCGCGTACGGCTCCGGCGCGCTCGCCGCGCCACCGTACTCGCACCAGGAGGTGTGGAACTTGGAAAGTAATCGTCGTCCACAAATGTCCGCGGCCGCCAGTCTCTCTGCCATCGACATGGCGGAGTTTTTCACGGAGGGGCGCGAGTGCGTGAACTGCGGCGCCATCCACACGccgctgtggcgtcgcgacGGCACCGGCCACTACCTGTGCAACGCGTGCGGCCTCTACAACAAGATGAACGGCATGAACCGGCCGCTGAAGCAGCCGCGGCGGCTGGTACGTCAGCGCCTCGCCGCGCCCCACGCGCCCCCGCACGACATGGGCACGAAGCGGCCGGGCATGTCTTGCACCAACTGCCAGACCAGCACCACGTCGCTGTGGCGCCGCAACTCGCTCGGCGAGACCGTGTGCAACGCGTGCGGCCTGTACTACAAGCTGCACAACATCAACCGCCCGCTGGCCATGAAGAAGGACTCCATACAGacAAGAAAGAGGAAACCTAAGAACAGTATAAAAGCCGAGCGAAATATCAAAGCAGCCGTCCAGCGCACCGTCACATCGGGCGTCAAGATCGAGAATCTGCTGGACAGCGGGCCCGGCGCCACCGGCGGCGCGCGCTCGCCGCTGGCGCTCAACTACTACGTGCAGCACGCGCTCAAGGTGGAGGAGCCGCCGCCCGCGCACAACGCACACGCCGCGCACCACGCTCACGCGCACGCCGCGCACGCGCACGCCGCGCACGCGCACGCTGCGCACGCGCTCTACGATGACGACTACCGGCGCGCCGCCGACGAGCGGCTGGAGCGGCCCACCGTCGTGTCCATGGGCAGCTGA
Protein Sequence
MLHETWPNAWHKTESFELDALFAEVNNNCLKEGEAECGAEGSGGDAESPPRLPPFGYAHPALSPSHSRSYQELRPAAAHARDMQAYAHLEEVFKPGTPGAAGSTDGVYLRRSSPDLSPSPERREDFRHYEPYAPAAPPPYSHDHHHHVDGSGGGGGGGAVYSRCAYAAGSPYFGNGAEITSQSQIWASSAGGSPNYGGGGVVLGEEYAEGVAEGGGGGAGGGSLPAFSARFGGAFACATSRPNTAYGSGALAAPPYSHQEVWNLESNRRPQMSAAASLSAIDMAEFFTEGRECVNCGAIHTPLWRRDGTGHYLCNACGLYNKMNGMNRPLKQPRRLVRQRLAAPHAPPHDMGTKRPGMSCTNCQTSTTSLWRRNSLGETVCNACGLYYKLHNINRPLAMKKDSIQTRKRKPKNSIKAERNIKAAVQRTVTSGVKIENLLDSGPGATGGARSPLALNYYVQHALKVEEPPPAHNAHAAHHAHAHAAHAHAAHAHAAHALYDDDYRRAADERLERPTVVSMGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00784863;
90% Identity
iTF_01535495;
80% Identity
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