Hzea013658.1
Basic Information
- Insect
- Helicoverpa zea
- Gene Symbol
- TFDP1
- Assembly
- GCA_002150865.1
- Location
- KZ116871.1:54266-63796[-]
Transcription Factor Domain
- TF Family
- E2F
- Domain
- E2F_TDP domain
- PFAM
- PF02319
- TF Group
- Helix-turn-helix
- Description
- This family contains the transcription factor E2F and its dimerisation partners TDP1 and TDP2, which stimulate E2F-dependent transcription. E2F binds to DNA as a homodimer or as a heterodimer in association with TDP1/2, the heterodimer having increased binding efficiency. The crystal structure of an E2F4-DP2-DNA complex shows that the DNA-binding domains of the E2F and DP proteins both have a fold related to the winged-helix DNA-binding motif. Recognition of the central c/gGCGCg/c sequence of the consensus DNA-binding site is symmetric, and amino acids that contact these bases are conserved among all known E2F and DP proteins.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.2e-23 1.1e-19 70.0 0.1 2 65 170 249 169 249 0.97
Sequence Information
- Coding Sequence
- ATGTCTCAGACGAATAGTACTGTAAATTTTCTTATACATGACGCTAATGggcATCCTCAAATGGTAAAAGTTGTTCAGAATACAAATAATCAGTCAGTTGCTCAAATCAAAATTAAGCCCAATCCTGTGAAAATCATAAAACTGCCAGCAACAGCTGAAGGAAATTTAAAGACATCAGTATACAGAGCAGTGAAACTGACTGGCATTAAATGTGCATCAAagttCCTGCATGTGGATAATATAGCaaatttgcaaaaaattaaAGTTGAGCCAAAGGAAGTTGAAGAAATTCAGATAAAACAGGAACCACTTACGGAACTGAAATATCTTCATACTGTGCCGGAACGCAGCTCAACACCATCAAAATCTGAGGGCCAGGTAACAAGCACTAGCACTGCTAACAGCTTGTCTCCTACTATGTCTCATGCCTCGAGAAGGAGACACGATTCTGACAATGATCCCCCGGCAGAATAtacCACTAAGCGACGTAAACATGCAGACAAGGTTGGCAAAGGTTTGAGGCATTTCTCAATGAAAGTTTGTGAAAAGGTCCGAAACAAAGGCTTCACCTCATACAACGAAGTTGCTGATGAATTAGTTCTAGAATTTGCAGCAGGCATGCATGGTTCAGCAGATAGCCAACAATATGATCAGAAGAATATCCGCAGAAGAGTATATGATGCATTAAATGTATTAATGGCAATGAACATAATATCTAAAGAAAAGAAGGAAATACGATGGCTTGGACTCCCAACAAATAGTGTGCAAGAATGTACTGCATTAGAAAAGGAAAAGCAAGCTAAGTTAGAGCAGATTCAAAAGAAAACACAACAGTTACAGGAGCTCATATTACAGCACATTTCATTTAAGAGTttaatagaaagaaataaagaagcAGAGAGCAAAGGAGTCAAACCATCTCCATCTTCAGCTATCCATTTGCCATTCATTGTTGTGAATACTAGTGATAAAGCTTTAATTGACTGCAGTATTTCTAATGATAAGACAGAATATATGTTCAATTTCAACAAAAGGTTCCAAATACACGATGATATCGACATTCTAAAAAGAATGGGACTTCTGTTtgGGTTAGATAAGGGAGAATGTTCAGAAGAAGATATTGAGAGAGCAAAAAGTATGGTCCCCAAATCCTTAAAGACATATGTAGAACAAATGGGCAGAGGAGTGATAACAAAACTTTCAACAATGCTCGAAGAAGAGGAGCTGGAAGATGAGGCGGGTGATGAGGAGGACGCGATAGAAGCGGAGGCAGAGGCCGAGGAGGAGCACGAGGAACCCGACGCCAACGACTACAGCGACGACAGCAGCGACGTCGACGTGTAG
- Protein Sequence
- MSQTNSTVNFLIHDANGHPQMVKVVQNTNNQSVAQIKIKPNPVKIIKLPATAEGNLKTSVYRAVKLTGIKCASKFLHVDNIANLQKIKVEPKEVEEIQIKQEPLTELKYLHTVPERSSTPSKSEGQVTSTSTANSLSPTMSHASRRRHDSDNDPPAEYTTKRRKHADKVGKGLRHFSMKVCEKVRNKGFTSYNEVADELVLEFAAGMHGSADSQQYDQKNIRRRVYDALNVLMAMNIISKEKKEIRWLGLPTNSVQECTALEKEKQAKLEQIQKKTQQLQELILQHISFKSLIERNKEAESKGVKPSPSSAIHLPFIVVNTSDKALIDCSISNDKTEYMFNFNKRFQIHDDIDILKRMGLLFGLDKGECSEEDIERAKSMVPKSLKTYVEQMGRGVITKLSTMLEEEELEDEAGDEEDAIEAEAEAEEEHEEPDANDYSDDSSDVDV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00783219; iTF_00636065; iTF_00404486; iTF_01166388; iTF_00637269; iTF_01425761; iTF_00784994; iTF_00821570; iTF_01259874; iTF_00039587; iTF_00041572; iTF_00040587; iTF_00043275; iTF_00042425; iTF_00147093; iTF_00071204; iTF_00111393; iTF_00274241; iTF_01118050; iTF_00906851; iTF_00928451; iTF_00121188; iTF_00122148; iTF_01094692; iTF_00444902; iTF_00123143; iTF_00685223; iTF_01093831; iTF_01339751; iTF_01439687; iTF_00888008; iTF_01338280; iTF_00973513; iTF_01025770; iTF_01061674; iTF_00237259; iTF_00448811; iTF_01064427; iTF_00363820; iTF_01531757; iTF_00425166; iTF_01377264; iTF_00905905; iTF_00850386; iTF_01029010; iTF_01062547; iTF_01027092; iTF_00374966; iTF_01028054; iTF_00711607; iTF_00851511; iTF_00907671; iTF_00038489; iTF_01526810; iTF_00809851; iTF_01092859; iTF_00273404; iTF_00726078; iTF_00924383; iTF_00808896; iTF_00300962; iTF_00301893; iTF_01084042; iTF_01084930; iTF_01063542; iTF_00830958; iTF_00383413; iTF_00823719; iTF_00156994; iTF_01360402; iTF_01221287; iTF_00185932; iTF_00185103; iTF_01424839; iTF_01538532; iTF_01285338; iTF_01362888; iTF_01362287; iTF_00708970; iTF_00172523; iTF_01197516; iTF_00282061; iTF_00280924; iTF_00667149; iTF_01151855; iTF_00000976; iTF_00017137; iTF_00017972; iTF_01332337; iTF_00952498; iTF_00951586; iTF_00706739; iTF_00771667; iTF_00785811; iTF_01487508; iTF_00326877; iTF_00621814; iTF_00869417; iTF_01073399; iTF_01491671; iTF_00888984; iTF_01501880; iTF_01180121; iTF_01179297; iTF_01534585; iTF_01533729; iTF_00120282; iTF_00449915; iTF_00049692; iTF_01342012; iTF_00441277; iTF_00908606; iTF_00171551; iTF_01075167; iTF_01192416; iTF_01119072;
- 90% Identity
- iTF_00444902;
- 80% Identity
- iTF_00783219;