Hass011689.1
Basic Information
- Insect
- Helicoverpa assulta
- Gene Symbol
- retn
- Assembly
- GCA_029618815.1
- Location
- CAWLCW010000012.1:8775703-8786109[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7e-19 8.8e-16 58.9 0.0 17 89 74 144 60 144 0.91 2 2 5.6 1.8e+04 -3.0 0.0 25 38 272 285 234 286 0.57
Sequence Information
- Coding Sequence
- ATGGGAGGCCGGGCCGGGCTGGCGAGCGCCGCTCATTGGCCCGCCGCGGGGTTGTCGGGCTCCAAGGGCCTTGATACTGCTCTCGATAAGCGGGAGGCGTTGAATGTCGATTCGATCGATTATCGCCCGTGTCGTCGCGCGCCGCCGACCGCCGCGCTAGTCGCACCGCGCGCTGCACTTGACATTTTGATGACCCTCGCACCGTCATTAATACGCTTGTGCACTCCAATAAACCGGCTACCAATAATGGCGAAGTCTGTGCTAGACCTGTATGAGCTGTACAACCTGGTGATTGCTCGCGGAGGACTGGTGGAAGTCATCAACAAGAAGTTGTGGCAGGAGATCATCAAGGGACTCCGGTTGCCTTCCTCTATCACATCTGCTGCCTTCACGCTGCGCACACAATACATGAAATACCTGTACGACTATGAGTGTGAGAAGAAGAACCTTTCGACCAGGAGTGAGCTGGACGCGGCTATCGAAGGCAACAAGAGGGAGGGTCGTCGTGCCTCAGGGCAATACGACGCGCAAGCTGCTCTGGCTATGCCCCCTCTAAACCGTGTGCCCGCATCACTGGCCCAGTTGTCACAGCATATGCAACCGCTGTCGCTGTCGCTCGGGGGCGTGGCGCCGCGACTACCGCCGCTGCCGCCGCACGCGCCGCACATCGCGCAACACGACATCGAGTACAGAGTGCGCGAGTATATGAAGATGATACAGCAGCAGAGGGAGCTTATGAGAAATGGTTCCGAATCACCCCCCAGCAATGGTCCAGCCCCGATCATGTCACCGCGCGACGCAGCCGCTCTGAGCGCCATCGACGTCTCCCGCCTGACCCTGTGGTCTCTgtataacaacaacaacaacaacagcccACAACCAGACCTTGAGCCTCAACGCGAGGCTCTGAACCTCAGCGAGAGCCCCAACTCGCAGACGAGCGGAGGCAAGCGCGAGGCGTGCCggtcgcccgcgccgcccgccaaGCGCCGCACGCCGCGGCCCGCGACGCCGCCGCACAGCCCGCCGACGCACCGCGCGCGTCGCGACGTCGCCTCGCCGCCGCAGCTCAACGGCATGCCCACTAATGGTGTTAATGGCGCTGCCTTCAAAATTACTACCAGAGGAGACGCGAGCACAGGAGACCAGCAGCTCGTGGTGTCCATAGAGCTGAACGGCGTCACGTATGAAGGCGTTCTCTTCCCCTCCGGCAACGGTCAGAACGGACACAGACAAATGGTCTCCTAA
- Protein Sequence
- MGGRAGLASAAHWPAAGLSGSKGLDTALDKREALNVDSIDYRPCRRAPPTAALVAPRAALDILMTLAPSLIRLCTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGVAPRLPPLPPHAPHIAQHDIEYRVREYMKMIQQQRELMRNGSESPPSNGPAPIMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSQTSGGKREACRSPAPPAKRRTPRPATPPHSPPTHRARRDVASPPQLNGMPTNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029938;
- 90% Identity
- iTF_01025756;
- 80% Identity
- -