Basic Information

Insect: Heliconius numata
Gene Symbol: -
Assembly: GCA_016802625.1
Location: JAEBDU010000085.1:1447054-1457599[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.2 1.2e+02 4.1 3.4 1 23 269 291 269 291 0.96

2 14 0.25 26 6.3 0.9 1 19 341 359 341 362 0.84

3 14 0.0018 0.18 13.1 0.2 1 23 380 403 380 403 0.94

4 14 0.34 34 5.9 1.4 3 19 442 458 440 459 0.91

5 14 3.7 3.7e+02 2.6 2.2 1 23 466 488 466 488 0.87

6 14 0.53 53 5.3 2.2 1 23 791 813 791 813 0.94

7 14 2.1 2.1e+02 3.4 0.6 1 23 864 885 864 885 0.84

8 14 1.3 1.3e+02 4.0 1.8 5 23 929 947 926 947 0.91

9 14 0.0087 0.88 10.9 0.3 2 23 963 984 962 984 0.96

10 14 4.3e-07 4.4e-05 24.4 1.9 1 23 990 1012 990 1012 0.99

11 14 0.00013 0.014 16.6 0.2 2 23 1018 1039 1017 1039 0.95

12 14 0.00067 0.067 14.4 2.9 2 21 1046 1065 1045 1070 0.91

13 14 4.7 4.7e+02 2.3 0.2 1 20 1071 1090 1071 1090 0.87

14 14 0.00031 0.031 15.4 0.1 3 23 1103 1124 1102 1124 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.2	1.2e+02	4.1	3.4	1	23	269	291	269	291	0.96
2	14	0.25	26	6.3	0.9	1	19	341	359	341	362	0.84
3	14	0.0018	0.18	13.1	0.2	1	23	380	403	380	403	0.94
4	14	0.34	34	5.9	1.4	3	19	442	458	440	459	0.91
5	14	3.7	3.7e+02	2.6	2.2	1	23	466	488	466	488	0.87
6	14	0.53	53	5.3	2.2	1	23	791	813	791	813	0.94
7	14	2.1	2.1e+02	3.4	0.6	1	23	864	885	864	885	0.84
8	14	1.3	1.3e+02	4.0	1.8	5	23	929	947	926	947	0.91
9	14	0.0087	0.88	10.9	0.3	2	23	963	984	962	984	0.96
10	14	4.3e-07	4.4e-05	24.4	1.9	1	23	990	1012	990	1012	0.99
11	14	0.00013	0.014	16.6	0.2	2	23	1018	1039	1017	1039	0.95
12	14	0.00067	0.067	14.4	2.9	2	21	1046	1065	1045	1070	0.91
13	14	4.7	4.7e+02	2.3	0.2	1	20	1071	1090	1071	1090	0.87
14	14	0.00031	0.031	15.4	0.1	3	23	1103	1124	1102	1124	0.93

Sequence Information

Coding Sequence: ATGGATAATAATAATAAGAAACGAAATAGAAAATCTAAATTAGTGCCGCGCAAGTATTCAGATTCGGATGATGAGAATATTGCTCTTATGCAGCAAGAAATTGAACTTGAGCTGGCAAACATAAAAGCTCAGTCAATACTAAAGAAACTGAGTGCAAGTAATTTGAACAATGAAACAGATTTTCAAATTTCAGTCAAAGTTGAAATTGAGAATTGTGACGATGATTATGATAATAATGATGAACAGTATGATTTGATGCCAAATGAAGAGAAAGAAACAAAAAAAGATGATTATTCAGTAGTTAATGATTTTATTTCTATTAAGACGGAGAAATCTGATGCCGTAGAAAGTACAAATAAACAGAAAGAAACAGAAGATGAAGATTTCTCTATACAAAAGGAAGAAGTAGTAGATATTTCAGATGTCGAAGAGAGTTTAGCAGTAAGAGACGAAAAAAACTCATTTGGTTCTGATGATGATGATGATGGTAATGGTGAACTGCTCACTCCAATAAAGAAAACTGATTTTAGAGTAGAATCGGTTACAACTTTAGCTAAATCTACCAAAACGATACTTACTTACAGAATACCAGACAAAATGATTCGTGATGAATTTGAATTAGTTTGTAGACAAACAACTCATAATGCTGACAAATTATTAGAAATGCGCCTAAGGAATTATTATGCTAAGGGTGTAAGGGGTGTATTGAATAACTGTGAAATAGATATAGGTATCCAAGAAGCTTTAAAGAAATGGAAAATGTGGCAGCTCGCCTTTCCTGCCGTTCGTGGGCCGCCGTTAATGTACATATGCAGCAAATGCAAGTTGGGATTTTGGCATTTGCATGACTTTCGGGAACACCTCCAAGACCATGCGGATATGAATTTCTCGTTTGTTAGCGAGGAACATCTAAGCTATGTTATAGGCCATCTTGGTAGAAAAGCGGATAAACAGTTCTTGAGTATAGATTCGGACTGCTGGAGATGCGGCAAAGGATTTAAATGCCATAACGATGTTATATTCAAATGCAACGGTTGTAACCGTTACTTCGAAACCTGCCTACTAATGTCTATACATGAGGCCACGTGCGAAGAAAACAAAAAAAATTTCGTCCAATCCGAGAATATGGATACACAATATAAATGCCCTGTCTGTCCATACAAATATTTTAGGGAAGAGGATATACAAAGGCACTTGATAGGTCTACACACTGTTAGATCTGATGTTCCGATATTCTGGTCCACTAAGAAATGTAGGAAATGCGATGGGATTGTCAATCATTCTTCTTTGCACGAGTGTAGCGAAAGACCAGGAATCCACTTATGTAAATTTTGTTCTAGAAGGTTCCAAAGTAAAGATAATATTATGATTCATTACTGGGTTTCGCCAAATAATTTTGAATGCCGGATTTGCAAGAAAGTGCTGAAAAAGGAGTGCATGGAGCAAAATCACTTGCTAAGTCATTCCAAAAATTACACTGCAATGTATAAGTGTTTACTCTGCAAGGATGATCTATATATTTTAGACAAGAAGATGGAAAAGCAACATAATTATAACACTCACAAGAAGAGGTTCACGAGGACTATTTTTGAAAAGATAATCGTGCCTAAGACCTTATTAAAGAAATTGAAAAATAATAAAAAGTTTATCCGAAAAGAAATGTTGGATATACGAAATTCAGATTCTAAACTTGAAAGCAATAATGATTCAAATGTTATCAATGATGATACTAGAGTTTTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAAATAATAAAGACGATACAACACCCATTAAAAATATTAAACAAGAAATCGAAATTGAAATTAATAATGATACTGAAACTAATCCTTATAAAATTAAAAGAAAATCTGAAATTCCAATAGAAAATGATTCGGAAATAAAGAGAATGGCCGATTTGGATTTGATTAATATAAAAGAGGAACCAGTGGATTTTCTAGATATTGTCGCTGTAGGAATTGAAACAGAAGAAGTTGAGGAAGACAATGATGATAGTATAAATTTGTTCAATGGAGTTAATGACGAATTAAATTTAGAATTACAAGCAGAAGAAGTGGAATTGCCAATTAAATATGAAGTAGATGAAGCTTATTATAATATAATTGAAAATAATACGATGGATACTGATTTTAGTTTAAACAATATGGAAGAAGACGATAGTAGTCAAAGCAAACCCGAAAAACTGCTGAAAGAATGCGACGTCAACATAAGCAATTATCAAAAATACGTCGGCGTGAAATATATGAAAATGATACATGACGATAATTATACATACAGTTGCTCGAAATGCAAGCTCGCGTATCAGTCTTCTAAAAAGTATCTCAACCATTTTATTTTGCACGGTTACAACAAAAACGCGTGCCCGCAGTGTCTTGCGGAGTTCCCGAATGTTGAACTACTGTGTTGCCATGTCAATATGCATATTAAATATAATTATATGAGCGTACATTCGATCCGTAATGAAAGTGCGACAGAGAAAAGTAGTAGAAAGTTTCAATGCAAGATTTGTCAGGAAATTTTAGTTGTTTCCCAATTTTTCACGCATTGGGAGAAACACTTAGTGGTGCAGGGGAAAGGGCAAGATCGTGTTAGCGCAGTTGATATGGATGGGAAGCCGTTTTTGAAGAACATGATTGTTTATATACAACAACCAGAGAAAGACACATTCAAATCCAAAACTTGTATACAATGTAAGAAAAAGTTTCTTAGAAAAAATGATATTAAAAGGCACATTATACAACATCTCCTCGACGATGCCTATGCAGAACAAATAAAGTATGGAAATTTAAAGTGTCAGATATGTGGGGCTGGATTCCAAACTGGGGATAGATATAAACGCCATCTGAGAGACCACGCGTCTCTTCCTGTATACAAATGTGAAATGTGCGACAAAGCCTTCAGCGACTCCTCAAACTTCTCCAAACACAAGAAAGTGCACAATCTGCACGTCTTAATATGTGATATTTGTGGGAAGAAGTTCCAGTATAAGCCGTATTTGATTAAACATTTAGAATTACACGAAACAATGAAACCAATTGAGTGTGAGAAATGTAAAAAAAAATTTTACACACAATCCTCCTACAGAAAACATTTTAAAAAGAGTAACGTGCACTTTAGGTGTCAGATTTGCAGATTGCTGTTTAACAGTATTAAAGAGAGATGGGATCACATGTGGGAGGTACATAAAAAAAGAAACTGCCAAGCGGACTGTCCGATATGCGGCGCCAGCTACAGGAAGAAGACTGACGTGAAGAGACACATGGCGGGGGTGCACGGCGAGCAGTCACTCGCGCATTACTACGGATGA
Protein Sequence: MDNNNKKRNRKSKLVPRKYSDSDDENIALMQQEIELELANIKAQSILKKLSASNLNNETDFQISVKVEIENCDDDYDNNDEQYDLMPNEEKETKKDDYSVVNDFISIKTEKSDAVESTNKQKETEDEDFSIQKEEVVDISDVEESLAVRDEKNSFGSDDDDDGNGELLTPIKKTDFRVESVTTLAKSTKTILTYRIPDKMIRDEFELVCRQTTHNADKLLEMRLRNYYAKGVRGVLNNCEIDIGIQEALKKWKMWQLAFPAVRGPPLMYICSKCKLGFWHLHDFREHLQDHADMNFSFVSEEHLSYVIGHLGRKADKQFLSIDSDCWRCGKGFKCHNDVIFKCNGCNRYFETCLLMSIHEATCEENKKNFVQSENMDTQYKCPVCPYKYFREEDIQRHLIGLHTVRSDVPIFWSTKKCRKCDGIVNHSSLHECSERPGIHLCKFCSRRFQSKDNIMIHYWVSPNNFECRICKKVLKKECMEQNHLLSHSKNYTAMYKCLLCKDDLYILDKKMEKQHNYNTHKKRFTRTIFEKIIVPKTLLKKLKNNKKFIRKEMLDIRNSDSKLESNNDSNVINDDTRVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNNKDDTTPIKNIKQEIEIEINNDTETNPYKIKRKSEIPIENDSEIKRMADLDLINIKEEPVDFLDIVAVGIETEEVEEDNDDSINLFNGVNDELNLELQAEEVELPIKYEVDEAYYNIIENNTMDTDFSLNNMEEDDSSQSKPEKLLKECDVNISNYQKYVGVKYMKMIHDDNYTYSCSKCKLAYQSSKKYLNHFILHGYNKNACPQCLAEFPNVELLCCHVNMHIKYNYMSVHSIRNESATEKSSRKFQCKICQEILVVSQFFTHWEKHLVVQGKGQDRVSAVDMDGKPFLKNMIVYIQQPEKDTFKSKTCIQCKKKFLRKNDIKRHIIQHLLDDAYAEQIKYGNLKCQICGAGFQTGDRYKRHLRDHASLPVYKCEMCDKAFSDSSNFSKHKKVHNLHVLICDICGKKFQYKPYLIKHLELHETMKPIECEKCKKKFYTQSSYRKHFKKSNVHFRCQICRLLFNSIKERWDHMWEVHKKRNCQADCPICGASYRKKTDVKRHMAGVHGEQSLAHYYG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00780644; iTF_00781427;
90% Identity: -
80% Identity: -