Basic Information

Insect: Heliconius melpomene
Gene Symbol: -
Assembly: None
Location: Hmel206001o:12538098-12549291[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.45 32 5.4 3.7 1 23 269 291 269 291 0.97

2 14 0.29 20 6.0 1.0 1 19 341 359 341 362 0.84

3 14 0.0044 0.31 11.7 0.5 1 23 380 403 380 403 0.93

4 14 0.19 13 6.6 3.0 1 19 440 458 440 459 0.94

5 14 4.1 2.8e+02 2.4 1.8 1 23 466 488 466 488 0.79

6 14 0.074 5.1 7.9 1.4 1 23 764 786 764 786 0.91

7 14 1.9 1.3e+02 3.4 0.6 1 23 837 858 837 858 0.84

8 14 1.2 81 4.1 1.8 5 23 902 920 899 920 0.91

9 14 0.022 1.5 9.5 0.2 2 23 936 957 935 957 0.96

10 14 3.9e-07 2.7e-05 24.5 1.9 1 23 963 985 963 985 0.99

11 14 0.00012 0.0085 16.6 0.2 2 23 991 1012 990 1012 0.95

12 14 0.00065 0.045 14.3 2.3 2 21 1019 1038 1018 1043 0.91

13 14 4.2 3e+02 2.3 0.2 1 20 1044 1063 1044 1063 0.87

14 14 0.00028 0.019 15.5 0.1 3 23 1076 1097 1075 1097 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.45	32	5.4	3.7	1	23	269	291	269	291	0.97
2	14	0.29	20	6.0	1.0	1	19	341	359	341	362	0.84
3	14	0.0044	0.31	11.7	0.5	1	23	380	403	380	403	0.93
4	14	0.19	13	6.6	3.0	1	19	440	458	440	459	0.94
5	14	4.1	2.8e+02	2.4	1.8	1	23	466	488	466	488	0.79
6	14	0.074	5.1	7.9	1.4	1	23	764	786	764	786	0.91
7	14	1.9	1.3e+02	3.4	0.6	1	23	837	858	837	858	0.84
8	14	1.2	81	4.1	1.8	5	23	902	920	899	920	0.91
9	14	0.022	1.5	9.5	0.2	2	23	936	957	935	957	0.96
10	14	3.9e-07	2.7e-05	24.5	1.9	1	23	963	985	963	985	0.99
11	14	0.00012	0.0085	16.6	0.2	2	23	991	1012	990	1012	0.95
12	14	0.00065	0.045	14.3	2.3	2	21	1019	1038	1018	1043	0.91
13	14	4.2	3e+02	2.3	0.2	1	20	1044	1063	1044	1063	0.87
14	14	0.00028	0.019	15.5	0.1	3	23	1076	1097	1075	1097	0.93

Sequence Information

Coding Sequence: ATGGATAAAAATAATAAGAGACGAAATAGAAAATCTAAATTAGTACCGCGCAAGTATTCAGATTCGGATGATGAGAATATTGCTCTTATGCAGCAAGAGATTGAACTTGAGGTGGCAAACATAAAAGCTCAGTCAATACTAAAGAAACTGAGTGCAAGTAATTTGAACAATGAAACAGATTTTCAAATTTCAGTCAAAGTTGAAATTGAGAATTGTGACGATGATTATGATAATAATGATGAACAGTATGATTTCATGCCAAATAAAGAAAAAGAAACAAAAGAAGATGATTATTCAGTAGTAAATGATTTTAATTCTATTGAGATGGAGAAATCTGATGCCGTAGAAAGTACAAATAAACAGAAAAAAACAGAAGATGAAGATTTCTCTATACAAAAAGAAGAAGCAGTAAATATTTCAGATGTTAAAGAGAGTTTAGCAATAAGAGACGAAAAAAAGTCATTTGGTTCTGATGATGATGATGATGGTAATGTTGAACTGCTCACTCCAATAAAGAAAACTGATAGTAGAGTAGAATTGGTTACAACTTTAGCTAAATCTACCAAAACGATACTTACTTACAGAATACCAGACAAAATGATTTGTGATGAATTTGAATTAGTTTGTAGACAAACAACTCATTATGCTGACAAATTATTAGAAATGCGCCTAAGGAATTATTATGCTAAGGATGGAAAGTGTGTATTGAATAACTGTGAAATAGATATAGGTATCCAAGAAGCTTTAAAGAAATGGAAAATGTGGCAGATCGCTTTTCCTGTCGTTCGTGGGCCGCCGTTAATGTACATATGCAGCAAATGCAAGTTGGGATTTTGGCATTTGCATGACTTTCGGGAACACCTCCGAGACCATGCGGATATGAATTTCTCGTTTATTAGCGAGGAACATCTGTGCTATGTTATAGGCCATCTTGGTAGAAAAGCGGATAAACAGTTCTTGAGTATAGATTCGGACTGCTGGAGATGCGGCAAAGGATTTAAATGCCATAACGATGTTATATTCAAATGCAATGGTTGTAACCGTTACTTCGAAACCTGCCTCCTAATGTCTATACATGAGGGCACATGCGAAGAAAACAAAAATAACTTCGCCCAATCAGAGAATAATGATATACAACATAAATGCCCTGTCTGTCCATACAAATATTTTAGGGAAGAGGATATACAAAGGCACTTGATAGGTCTACACACGGTTAGATCTGATGTTCCGATATTCTGGACCACTAAGAAATGTAGGAAATGCGATGGGATTGTCAATCATTCTTCTTTGCACGAGTGTAGCGAAAAACCAGGAATCCACGTATGTAAATTTTGTTCTAGAAGGTTCCAAAACAAACATAATATTATGATTCATTACTGGGTTTCGCCAAATAATTTTGAATGCCGGATTTGCAAGAAAGTGTTAAAAAAAGAGTGCATGGAACAAGATCACTTGCTAAGTCATTCGGAAAGTTACACTGCAATGTATAAGTGTTTACTCTGCAAGGATGATCTATATATTTTAGACAAGAAGTTGGAAAAGCAACATAATTATAACACTCACAAGAAGAGGTTCACGAGAACTATTTTTGAAAAGGTAATCGTGCCTAAGACCTTATTAAAGAAATTGAAAAATAATAAAAAGTTTATTCGAAAAGAAATATTGGATATACCAAATTCAGATACTAAACTTGAAAGCAATAATAAATCAGGCGATAAACGGAAACCAAAATGTATTGCCGCTAAGAACCCTCCATCTATCTTAAATAATAAAGACGATACAACGCCCATTAAAAATATTAAACAAGAAAACGAAATTGAAATTAATAATGATACTGAAACTAATCCTTATAAACGCAAAAGAAAATCTGAAATTACGACAGAAAATGATTCGGAAATAAAGAGAATGGCCGATTTGGATTCGATTAATATAAAAGAGGAACCAGTGGATTTTCTAGATATTGTCGCTGTAGGTATTGAAACAGAAGAAGTTGAGGAAGACAATGATGATAATATAAATTTGTTTAATGGAGTTAATGACGAATTAAATTTAGAATTACAAGCAGAAGAAGTGGATTTGCCAATTAAATATGAAGTAGATGAAGCTTATTATAATATAATTGACAATAATACGATGGATACTGATTTTAGTTTAAACAATATGGAAGAAGATGATAGTAGTAAAAGCAAACCCGAAAAAGTGCCAAAAAAATACGAAGTCAACATAAGCCAATATCAAAAATACGTCGGCGTGAAATATATGAAAATGATACATGACGATAAATATTCATACCGTTGCTCGAAATGCAAGCGTGTGTATCAGTCTTCTATAGAGTATCTCAACCATTTTGTTTTGCACGGTTACAACAGTAACGCGTGCCCGCAGTGTCTTGCGGAATTCCCGAATGTTGAACTACTGTGTTGCCATGTCAATATGCATATTAAATATAATTATATGAGTGTACATTCGATCCGTAATGAAAGTGCGACAGAGAAAAGTATTAGAAAGTTTCAATGCAAGATTTGTCAGGAAATTTTAGTTGTTTCCCAATTTTTCACGCATTGGGAGAAACACTTAATGGTGCAGGACAAAGCTCAACAGCGTGGTTGCGCAGTTGATATGGATGGGAAGCCGTTTTTGAAGAACATGATTGTTTTTATACAACAACCAGAGAAAAATACATTCAAATCCAAAACTTGCATACAATGTAAGAAAAAGTTTCTTAGAAAAAATGATATTAAAAGGCACATCATACAACATCTCCTCGACGATGCCTATGCAGAACAAATAAAGTATGGAAATTTAAAGTGTCAGATATGTGGGGCTGGATTCCAAAGTGGGGATAGATATAAACGCCATGTGAGAGACCACGCGTCTCTTCCTGTATACAAATGTGAAATGTGCGACAAAGCCTTCAGCGACTCCTCAAACTTCTCCAAACACAAGAAAGTGCACAATCTGCATGTCTTAATATGTGATATTTGTGGGAAGAAGTTCCAGTATAAGCCGTATTTGATTAAACATTTAGAATTACATGAAACGATGAAACCAATTGAGTGTGAGAAATGTAAAAAAAAATTTTACACACAATCCGCTTACAGAAAACATTTCAAAAAGAGTAACGTGCACTTTAGGTGTCAGATTTGCAGATTGCTGTTTAACAGTATTAAAGAGAGATGGGATCACATGTGGGAGGTACATAAAAAAAGAAACTGTCAAGCGGACTGTCCGATATGCGGCGCCAGCTACAGGAAAAAGACTGACGTGAAGAGACACATGGCGGGGGTGCACGGCGAGCAGTCACTCACGCATTACTACGGATGA
Protein Sequence: MDKNNKRRNRKSKLVPRKYSDSDDENIALMQQEIELEVANIKAQSILKKLSASNLNNETDFQISVKVEIENCDDDYDNNDEQYDFMPNKEKETKEDDYSVVNDFNSIEMEKSDAVESTNKQKKTEDEDFSIQKEEAVNISDVKESLAIRDEKKSFGSDDDDDGNVELLTPIKKTDSRVELVTTLAKSTKTILTYRIPDKMICDEFELVCRQTTHYADKLLEMRLRNYYAKDGKCVLNNCEIDIGIQEALKKWKMWQIAFPVVRGPPLMYICSKCKLGFWHLHDFREHLRDHADMNFSFISEEHLCYVIGHLGRKADKQFLSIDSDCWRCGKGFKCHNDVIFKCNGCNRYFETCLLMSIHEGTCEENKNNFAQSENNDIQHKCPVCPYKYFREEDIQRHLIGLHTVRSDVPIFWTTKKCRKCDGIVNHSSLHECSEKPGIHVCKFCSRRFQNKHNIMIHYWVSPNNFECRICKKVLKKECMEQDHLLSHSESYTAMYKCLLCKDDLYILDKKLEKQHNYNTHKKRFTRTIFEKVIVPKTLLKKLKNNKKFIRKEILDIPNSDTKLESNNKSGDKRKPKCIAAKNPPSILNNKDDTTPIKNIKQENEIEINNDTETNPYKRKRKSEITTENDSEIKRMADLDSINIKEEPVDFLDIVAVGIETEEVEEDNDDNINLFNGVNDELNLELQAEEVDLPIKYEVDEAYYNIIDNNTMDTDFSLNNMEEDDSSKSKPEKVPKKYEVNISQYQKYVGVKYMKMIHDDKYSYRCSKCKRVYQSSIEYLNHFVLHGYNSNACPQCLAEFPNVELLCCHVNMHIKYNYMSVHSIRNESATEKSIRKFQCKICQEILVVSQFFTHWEKHLMVQDKAQQRGCAVDMDGKPFLKNMIVFIQQPEKNTFKSKTCIQCKKKFLRKNDIKRHIIQHLLDDAYAEQIKYGNLKCQICGAGFQSGDRYKRHVRDHASLPVYKCEMCDKAFSDSSNFSKHKKVHNLHVLICDICGKKFQYKPYLIKHLELHETMKPIECEKCKKKFYTQSAYRKHFKKSNVHFRCQICRLLFNSIKERWDHMWEVHKKRNCQADCPICGASYRKKTDVKRHMAGVHGEQSLTHYYG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00782252;
90% Identity: -
80% Identity: -