Basic Information

Insect: Heliconius numata
Gene Symbol: -
Assembly: GCA_016802625.1
Location: JAEBDU010013228.1:1910455-1926662[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 6.7e-05 0.0068 17.5 2.2 1 23 418 440 418 440 0.97

2 18 0.0049 0.49 11.7 0.7 1 20 446 465 446 468 0.94

3 18 1.8e-05 0.0019 19.3 5.4 1 23 487 509 487 509 0.98

4 18 0.00016 0.016 16.4 4.7 1 23 515 537 515 537 0.99

5 18 3e-05 0.003 18.6 5.3 1 23 543 565 543 565 0.97

6 18 9.5e-06 0.00096 20.2 7.3 1 23 571 593 571 593 0.97

7 18 6.2e-07 6.3e-05 23.9 2.9 1 23 599 621 599 621 0.97

8 18 8.5e-05 0.0086 17.2 6.7 1 23 627 649 627 649 0.97

9 18 0.00019 0.02 16.1 5.6 1 23 655 677 655 677 0.97

10 18 4.1e-07 4.1e-05 24.5 1.9 1 23 683 705 683 705 0.98

11 18 4e-05 0.004 18.2 8.1 1 23 711 733 711 733 0.98

12 18 6.6e-06 0.00067 20.7 6.6 1 23 739 761 739 761 0.98

13 18 1.8e-05 0.0019 19.3 7.1 1 23 767 789 767 789 0.97

14 18 2.6e-06 0.00026 22.0 6.0 1 23 795 817 795 817 0.98

15 18 2.5e-05 0.0025 18.9 7.8 1 23 823 845 823 845 0.97

16 18 2.1e-06 0.00021 22.3 4.1 1 23 851 873 851 873 0.96

17 18 0.0018 0.18 13.0 0.6 1 23 880 902 880 902 0.95

18 18 0.002 0.2 12.9 4.0 1 23 913 935 913 935 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	6.7e-05	0.0068	17.5	2.2	1	23	418	440	418	440	0.97
2	18	0.0049	0.49	11.7	0.7	1	20	446	465	446	468	0.94
3	18	1.8e-05	0.0019	19.3	5.4	1	23	487	509	487	509	0.98
4	18	0.00016	0.016	16.4	4.7	1	23	515	537	515	537	0.99
5	18	3e-05	0.003	18.6	5.3	1	23	543	565	543	565	0.97
6	18	9.5e-06	0.00096	20.2	7.3	1	23	571	593	571	593	0.97
7	18	6.2e-07	6.3e-05	23.9	2.9	1	23	599	621	599	621	0.97
8	18	8.5e-05	0.0086	17.2	6.7	1	23	627	649	627	649	0.97
9	18	0.00019	0.02	16.1	5.6	1	23	655	677	655	677	0.97
10	18	4.1e-07	4.1e-05	24.5	1.9	1	23	683	705	683	705	0.98
11	18	4e-05	0.004	18.2	8.1	1	23	711	733	711	733	0.98
12	18	6.6e-06	0.00067	20.7	6.6	1	23	739	761	739	761	0.98
13	18	1.8e-05	0.0019	19.3	7.1	1	23	767	789	767	789	0.97
14	18	2.6e-06	0.00026	22.0	6.0	1	23	795	817	795	817	0.98
15	18	2.5e-05	0.0025	18.9	7.8	1	23	823	845	823	845	0.97
16	18	2.1e-06	0.00021	22.3	4.1	1	23	851	873	851	873	0.96
17	18	0.0018	0.18	13.0	0.6	1	23	880	902	880	902	0.95
18	18	0.002	0.2	12.9	4.0	1	23	913	935	913	935	0.99

Sequence Information

Coding Sequence: ATGAATCCGGATCACCATAGTATTAATTCGGGTGGTGGCCAAGCTCCAGGCAATTCCGAGTCTCAGAACCAAAGGGTTCAGTCGACACAGCAACAACAGCCGACGCAAACAAATAATTTACCACCTACAACATCTGCTACCGATTTGAGAGTCAACTCGGCGGCGGTAAACGTTGCCCTGTCGAGCGTGGCTAAATACTGGGTGTTTACTAATTTATTTCCCGGTCCATTGCCACAAGTTTCTGTCTACGGTTTACCTACTGGTGCAAGACTTGAAAATGGGAAACCTGTGCAGGATCTTGGTCAAGCACATGCAAGTATTTTGAATGGAGATCCTAACATTATATTAGGGCATGCTGGACAACCACAAGTTACGGTTTCCGCAGCAGGTCAACAATTACCTGTATCACAAATTATTGCTAATCAAGCAACACAAGGACATGAGACTCTGGTGGGGCATACACAGCAACAAGAAACAGCGACTAGCAGTGCTCCGTTGGCAGTTGCTCAAACCCAGCAGGTACCCAATAATCGGGTCGAGTTTGTACAACACCATAACGTCGATATGGCTCATCACTCACAGCAGCAGCATATCATGCAGCAGCAGCTGATGGCGGCCGCGCGTCCCGAACACGCAAACCAACAGATTCAGCTGACGGTAAGCGAGGATGGCATAGTAACAGTGGTGGAGCCCGGCGGCGGCGGGAAGCTCGTAGAGAAGGAAGAGCTTCATGAAGGTATCAAAATGCCTACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATCACCAGGTGATCGACAGCGTCGTGCGCATAGAACAAGCGACGGGCGAACCCGCCAATATATTGGTGACGCAGAACCCGGACGGCACCACTTCTATAGAGACCAGCGCCGCCGACCCGCTCCTAGTGAAGGATGAGAAGAATGTCGCCAAAATTGAGTCCGCTCAATTTGCTATACCGGCGGAGATTAAGGATATTAAAGGAATCGATTTGAAGAGTGTTGGAGCTATGGGCATGGAGGGAGCAGTGGTTAAGATTTCAGCGGCATCTGAACACGATCTCCAACATGCCATGTATAAAGTGAATGTGGAAGATCTCTCGCAACTTCTGGCGTACCATGAAGTGTTTGGGAAACTTAATACTGAAAATCAACAACAGCCTAAGGTAATAACTGAAGTGGAAGTGGAGGCTGGCACCAGCGCCGCCATGTCGGAGGCGGAGTCGTCTCCCGGACACCACTCTTGCGACATATGCGGGAAGATATTCCAATTCCGATATCAACTTATTGTTCATAGACGCTACCACGGAGAAAGCAAACCTTTTACGTGTCAAGTTTGTGGCTCCGCATTTGCTAATCCGGTGGAATTGTCAAAACATGGAAAATGTCACTTGGCCGGTGATCCCGCCGAACGTCAAGCAAAGAGACTGGCGCAGGACAAGCCCTACGCGTGTTCCACTTGCCACAAGACGTTCTCGCGTAAGGAGCACCTCGACAACCATGTCCGGAGTCATACTGGGGAAACTCCATACAGATGTCAATTTTGCGCAAAAACATTCACTCGCAAGGAGCACATGGTGAACCACGTGCGCAAGCACACCGGCGAGACGCCTCACCGATGCGAGATATGCAAGAAGAGCTTCACGCGCAAGGAGCACTTCATGAACCACGTCATGTGGCACACTGGTGAAACGCCGCACCATTGTCAAATATGCGGCAAGAAGTACACTAGGAAGGAGCATTTAGTGAATCATATGAGGTCTCATACGAATGACACGCCGTTCAGGTGCGATTTGTGCGGCAAGTCCTTCACCAGGAAGGAACACTTCACCAATCACATATTGTGGCACACCGGTGAAACTCCACATCGATGTGACTTCTGCTCTAAAACCTTCACTCGTAAAGAGCACCTGCTGAACCACGTGCGTCAACATACTGGGGAATCACCGCATCGATGCAACTTCTGTGCAAAGTCTTTCACAAGACGAGAACATTTAGTCAATCATGTGCGGCAACACACCGGTGAAACGCCTTTCCAGTGCGGATACTGCCCTAAAGCGTTTACTAGGAAAGATCATTTAGTAAATCATGTTCGTCAACACACGGGAGAGTCCCCACATAAATGTACATTCTGTACGAAATCTTTTACACGCAAAGAGCATTTAACGAATCACGTGCGGCAACACACTGGGGAATCCCCACATCGATGTACATACTGCGCCAAGTCTTTCACTAGGAAGGAGCATCTTACAAATCATATAAGACAACATACGGGTGAAACGCCATTCAAATGCACATACTGCTCGAAGTCGTTCTCGCGTAAGGAGCATCTCACGAACCATGTGCATCTTCACACTGGTGAAACACCGCATAAGTGTCCATTCTGTACTAAGACATTCTCTAGGAAGGAACACTTAACTAACCATGTCAGGATACATACAGGTGAATCTCCACACAGATGCGAGTTCTGTAACAAAACATTCACAAGAAAGGAACATTTAACCAATCATTTGAAGCAGCACACGGGTGATACGCCGCATGCGTGTAAAATATGCTCGAAGCCGTTCACCAGGAAAGAACATTTAGTAACACATATGAGATCCCACAGTTGTGGGGAGAGACCACACATTTGCGGTGAATGTGGGAAATCCTTCCCCTTGAAGGGTAATCTGCTGTTCCACGAGAGGTCACACAATAAAGGCGCCAATGCGTCAAACAAAACGTTCCGTTGTGACGTGTGCTCCAAGGAGTTTATGTGCAAAAGTAATTTAGTATCCCATCGAAGAACCCACACAGAAACCGGCGAGGGCACTACAACCACAGAGCCGACACCTGAAAATGAAGATTGTGGAGATTGTAACAAGTGCGACAAAGACTCACCAGAAAGACCTGAGAGGAAACATGATACGAGAGCGTCATCAGAAAACAGAGCTACTACTGAAGCAACTGCTGCACAAAATCCATCGCCAAATCCAAACCCAACTGTCATGCAAATTAATAGCCAACAAGTGCGAACGGGCCCCACAACGACCGCCAGCGTAGCAACAGGCACGTTCACCCACACCGCCACCACCCAACACCACGCCTCTAGCAGTATAGCCCATCACCCTGTTACTGTGAATTACTAG
Protein Sequence: MNPDHHSINSGGGQAPGNSESQNQRVQSTQQQQPTQTNNLPPTTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPLPQVSVYGLPTGARLENGKPVQDLGQAHASILNGDPNIILGHAGQPQVTVSAAGQQLPVSQIIANQATQGHETLVGHTQQQETATSSAPLAVAQTQQVPNNRVEFVQHHNVDMAHHSQQQHIMQQQLMAAARPEHANQQIQLTVSEDGIVTVVEPGGGGKLVEKEELHEGIKMPTXXXXXXXXXXXXXXHHQVIDSVVRIEQATGEPANILVTQNPDGTTSIETSAADPLLVKDEKNVAKIESAQFAIPAEIKDIKGIDLKSVGAMGMEGAVVKISAASEHDLQHAMYKVNVEDLSQLLAYHEVFGKLNTENQQQPKVITEVEVEAGTSAAMSEAESSPGHHSCDICGKIFQFRYQLIVHRRYHGESKPFTCQVCGSAFANPVELSKHGKCHLAGDPAERQAKRLAQDKPYACSTCHKTFSRKEHLDNHVRSHTGETPYRCQFCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKEHLVNHMRSHTNDTPFRCDLCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCAKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCTFCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLTNHIRQHTGETPFKCTYCSKSFSRKEHLTNHVHLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCEFCNKTFTRKEHLTNHLKQHTGDTPHACKICSKPFTRKEHLVTHMRSHSCGERPHICGECGKSFPLKGNLLFHERSHNKGANASNKTFRCDVCSKEFMCKSNLVSHRRTHTETGEGTTTTEPTPENEDCGDCNKCDKDSPERPERKHDTRASSENRATTEATAAQNPSPNPNPTVMQINSQQVRTGPTTTASVATGTFTHTATTQHHASSSIAHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00777488;
90% Identity: iTF_00778166;
80% Identity: -